Rh2AG274200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
32684151 .. 32701131
16981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG274200.1

Sequence Viewer

Length: 1356 bp
ATGGCTTTTTTAGTTTGTTATCTTCTTGCCTTTGCGTTCTTCAATTATGCTGAAGCACAACAACTGCAGTCTAATATAAGCAGGGGCTCTGCTTTAACACCCACTACCAAATCCTCATGGTTGTCTCGTTCCGGTATGTATGCCTTTGGCTTTTACAAGCAAGGCAATGGCTTTGCTGTGGGGATAGTTGTTGCTGGAGTCCCTGAAAAGACTGTGGTGTGGACTGCAGATCGAGATGGTGGACTTGTCTCAGACAATGCCACCTTGTTCTTCACAAGTGGTGGGATTGCCTTGCAATCGACAGAAGGGCGAAGTTTGGTGGTTGAGTCTCCAATGCCTATTTCTTCTGCTTCGATGCTTAATTCGGGTAATTTTGTGCTGTACAATGCGAGTCGGGCAATAGTATGGCAAAGCTTCTTGTACCCAACTGATACCTTGTTGCCCACTCAACCACTGCTAGCAGGGAAGGAACTTCGGTCTGCTAAATCAGAAACTGATCACTCATCAGGCATTTTCCGTCTCGCTATGCAAGTTGACGGAAACCTTGTCCAGTACCCTGTGGACACTCCACCAGAAGCTCAATATTCATACTATTCATCTTTCACAAATGGAGCAGGATCAAATGTGTCGCTAAATTTTGGTGTTGATGGCCGTCTCTACTTGCTCAATGATACTGGTGGAAATTTAAAGAATATCACCGATGGAGGTCTTCCCATTCGAGGAAAATCTTATCTTGTGAGAATTGATGCAGATGGGATTCTTCGTCTGTATTCGTATGATCTGAAACAGAAAGGAAATTGGTCCACTAAATGGTCATCTTCAACGGATAGATGTAAACCTAAAGGTATATGCGGATATAATAGCTACTGTGTCACAATGGGGGAGGCGATTGATTGTAGATGTCTTCCTGGATTTGAATCTGTCAACCCAGGAAATCAGACTTCAGGTTGTGAGAGAAATTCTTCTGTTGGAGATGTTTGCAGATCGAAGAATTGGAATTGCAACTACACCATGCAAGAACTGGGCAGAACCTGGTTGGAGGATGCGCCATATATGGTTCTGTCATCTTCAGGTAAAGAAGATTGCAAACAGGCCTGTTTGGAGGATTTGAACTGTCAGGCTGCAGTTCTTGAAGATGCAAGCTGTAGAAAGCAGAGGCTTCCTTTGAGATATGCAAGAAGAGATGAGGGTACTTCGAAAGTAGTTTTCCTCAAGGAGGTTGTCATGTTTTCTGCAGCTCCAGCTCCAGATGTGGTTGTTCCAAAAGGAAGCAGGAAAAATGGTAGAATTCTAACTTCATCTCTCCTATGGAAACAATCTGGCAATGCCCCGGATGAATCTCTATTTTCAGAGTAA

Protein Analysis

451

Amino Acids

49.22

Weight (kDa)

7.85

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 154 2.5e-12 D-mannose binding lectin
S_locus_glycop PF00954 246 - 307 3.1e-07 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 810
AciI CCGC 1 cut(s) 852
AclWI GGATC 1 cut(s) 625
AcoI YGGCCR 1 cut(s) 649
AcsI RAATTY 4 cut(s) 634, 682, 958, 1287
AcuI CTGAAG 3 cut(s) 72, 927, 1053
AfaI GTAC 4 cut(s) 383, 422, 554, 1192
AfiI CCNNNNNNNGG 3 cut(s) 719, 810, 1216
AgsI TTSAA 5 cut(s) 43, 822, 917, 1111, 1133
AjnI CCWGG 3 cut(s) 907, 928, 1031
AjuI GAANNNNNNNTTGG 2 cut(s) 325, 357
AluBI AGCT 6 cut(s) 414, 578, 864, 1143, 1238, 1244
AluI AGCT 6 cut(s) 414, 578, 864, 1143, 1238, 1244
Alw26I GTCTC 5 cut(s) 129, 253, 333, 524, 659
AlwI GGATC 1 cut(s) 625
AlwNI CAGNNNCTG 2 cut(s) 494, 1032
AoxI GGCC 2 cut(s) 649, 1092
ApeKI GCWGC 2 cut(s) 1121, 1235
ApoI RAATTY 4 cut(s) 634, 682, 958, 1287
Asp700I GAANNNNTTC 1 cut(s) 961
AspLEI GCGC 1 cut(s) 1048
AspS9I GGNCC 1 cut(s) 801
AsuC2I CCSGG 1 cut(s) 1331
AsuHPI GGTGA 1 cut(s) 688
AsuII TTCGAA 1 cut(s) 1196
AsuNHI GCTAGC 1 cut(s) 457
AvaII GGWCC 1 cut(s) 801
BanII GRGCYC 1 cut(s) 89
BbsI GAAGAC 2 cut(s) 701, 896
BbvI GCAGC 2 cut(s) 1108, 1247
BccI CCATC 4 cut(s) 230, 641, 695, 746
BceAI ACGGC 1 cut(s) 636
BciT130I CCWGG 3 cut(s) 909, 930, 1033
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 1 cut(s) 1331
BcoDI GTCTC 5 cut(s) 129, 253, 333, 524, 659
BfaI CTAG 1 cut(s) 458
BfmI CTRYAG 5 cut(s) 65, 225, 1122, 1144, 1233
BisI GCNGC 2 cut(s) 1122, 1236
BlsI GCNGC 2 cut(s) 1123, 1237
Bme1390I CCNGG 4 cut(s) 909, 930, 1033, 1331
Bme18I GGWCC 1 cut(s) 801
BmgT120I GGNCC 1 cut(s) 801
BmrFI CCNGG 4 cut(s) 909, 930, 1033, 1331
BmrI ACTGGG 1 cut(s) 1031
BmsI GCATC 4 cut(s) 345, 736, 1033, 1126
BmtI GCTAGC 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 1031
BpiI GAAGAC 2 cut(s) 701, 896
BpmI CTGGAG 3 cut(s) 216, 1224, 1230
Bpu14I TTCGAA 1 cut(s) 1196
BpuEI CTTGAG 1 cut(s) 1196
BpuMI CCSGG 1 cut(s) 1331
BsaBI GATNNNNATC 1 cut(s) 916
BsaJI CCNNGG 2 cut(s) 928, 1329
BsaWI WCCGGW 1 cut(s) 131
Bsc4I CCNNNNNNNGG 3 cut(s) 719, 810, 1216
Bse1I ACTGG 3 cut(s) 550, 679, 1026
Bse3DI GCAATG 2 cut(s) 172, 1330
Bse8I GATNNNNATC 1 cut(s) 916
BseBI CCWGG 3 cut(s) 909, 930, 1033
BseDI CCNNGG 2 cut(s) 928, 1329
BseGI GGATG 2 cut(s) 1048, 1339
BseJI GATNNNNATC 1 cut(s) 916
BseLI CCNNNNNNNGG 3 cut(s) 719, 810, 1216
BseMI GCAATG 2 cut(s) 172, 1330
BseMII CTCAG 1 cut(s) 264
BseNI ACTGG 3 cut(s) 550, 679, 1026
BseXI GCAGC 2 cut(s) 1108, 1247
BshFI GGCC 2 cut(s) 651, 1094
BsiSI CCGG 2 cut(s) 132, 1331
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 3 cut(s) 719, 810, 1216
BsmAI GTCTC 5 cut(s) 129, 253, 333, 524, 659
BsmBI CGTCTC 2 cut(s) 524, 659
BsmFI GGGAC 1 cut(s) 185
BsnI GGCC 2 cut(s) 651, 1094
Bsp119I TTCGAA 1 cut(s) 1196
Bsp1286I GDGCHC 1 cut(s) 89
Bsp1407I TGTACA 1 cut(s) 381
Bsp143I GATC 5 cut(s) 229, 496, 617, 778, 983
BspACI CCGC 1 cut(s) 852
BspANI GGCC 2 cut(s) 651, 1094
BspCNI CTCAG 1 cut(s) 263
BspMAI CTGCAG 4 cut(s) 69, 229, 1126, 1237
BspOI GCTAGC 1 cut(s) 461
BspPI GGATC 1 cut(s) 625
BspT104I TTCGAA 1 cut(s) 1196
BsrDI GCAATG 2 cut(s) 172, 1330
BsrGI TGTACA 1 cut(s) 381
BsrI ACTGG 3 cut(s) 550, 679, 1026
BssECI CCNNGG 2 cut(s) 928, 1329
BssMI GATC 5 cut(s) 229, 496, 617, 778, 983
Bst2UI CCWGG 3 cut(s) 909, 930, 1033
Bst4CI ACNGT 3 cut(s) 214, 869, 1115
Bst6I CTCTTC 1 cut(s) 1174
BstAUI TGTACA 1 cut(s) 381
BstBI TTCGAA 1 cut(s) 1196
BstC8I GCNNGC 2 cut(s) 459, 1141
BstDEI CTNAG 1 cut(s) 250
BstENI CCTNNNNNAGG 1 cut(s) 1214
BstF5I GGATG 2 cut(s) 1048, 1339
BstHHI GCGC 1 cut(s) 1048
BstKTI GATC 5 cut(s) 232, 499, 620, 781, 986
BstMAI GTCTC 5 cut(s) 129, 253, 333, 524, 659
BstMBI GATC 5 cut(s) 229, 496, 617, 778, 983
BstMWI GCNNNNNNNGC 2 cut(s) 395, 1241
BstNI CCWGG 3 cut(s) 909, 930, 1033
BstSCI CCNGG 4 cut(s) 907, 928, 1031, 1329
BstSFI CTRYAG 5 cut(s) 65, 225, 1122, 1144, 1233
BstV1I GCAGC 2 cut(s) 1108, 1247
BstV2I GAAGAC 2 cut(s) 701, 896
BsuRI GGCC 2 cut(s) 651, 1094
BtsCI GGATG 2 cut(s) 1048, 1339
BtsI GCAGTG 1 cut(s) 452
BtsIMutI CAGTG 1 cut(s) 452
Cac8I GCNNGC 2 cut(s) 459, 1141
CaiI CAGNNNCTG 2 cut(s) 494, 1032
CfoI GCGC 1 cut(s) 1048
Cfr13I GGNCC 1 cut(s) 801
CsiI ACCWGGT 1 cut(s) 1031
Csp6I GTAC 4 cut(s) 382, 421, 553, 1191
CviAII CATG 3 cut(s) 117, 1012, 1225
CviQI GTAC 4 cut(s) 382, 421, 553, 1191
DdeI CTNAG 1 cut(s) 250
DpnI GATC 5 cut(s) 231, 498, 619, 780, 985
DpnII GATC 5 cut(s) 229, 496, 617, 778, 983
DraI TTTAAA 1 cut(s) 687
EaeI YGGCCR 1 cut(s) 649
Eam1104I CTCTTC 1 cut(s) 1174
EarI CTCTTC 1 cut(s) 1174
Eco147I AGGCCT 1 cut(s) 1094
Eco24I GRGCYC 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 801
Eco57I CTGAAG 3 cut(s) 72, 927, 1053
EcoNI CCTNNNNNAGG 1 cut(s) 1214
EcoRI GAATTC 1 cut(s) 1287
EcoRII CCWGG 3 cut(s) 907, 928, 1031
EcoT38I GRGCYC 1 cut(s) 89
Esp3I CGTCTC 2 cut(s) 524, 659
FaeI CATG 3 cut(s) 120, 1015, 1228
FaqI GGGAC 1 cut(s) 185
FatI CATG 3 cut(s) 116, 1011, 1224
FbaI TGATCA 1 cut(s) 496
Fnu4HI GCNGC 2 cut(s) 1122, 1236
FokI GGATG 2 cut(s) 1055, 1346
FriOI GRGCYC 1 cut(s) 89
Fsp4HI GCNGC 2 cut(s) 1122, 1236
FspBI CTAG 1 cut(s) 458
GlaI GCGC 1 cut(s) 1047
GluI GCNGC 2 cut(s) 1122, 1236
GsuI CTGGAG 3 cut(s) 216, 1224, 1230
HaeIII GGCC 2 cut(s) 651, 1094
HapII CCGG 2 cut(s) 132, 1331
HhaI GCGC 1 cut(s) 1048
Hin1II CATG 3 cut(s) 120, 1015, 1228
Hin6I GCGC 1 cut(s) 1046
HinP1I GCGC 1 cut(s) 1046
HincII GTYRAC 2 cut(s) 535, 925
HindII GTYRAC 2 cut(s) 535, 925
HindIII AAGCTT 1 cut(s) 412
HinfI GANTC 6 cut(s) 198, 326, 391, 757, 917, 1337
HpaII CCGG 2 cut(s) 132, 1331
HphI GGTGA 1 cut(s) 688
Hpy166II GTNNAC 7 cut(s) 222, 242, 535, 562, 804, 836, 925
Hpy188I TCNGA 5 cut(s) 253, 490, 783, 939, 1351
Hpy188III TCNNGA 3 cut(s) 233, 1130, 1247
Hpy8I GTNNAC 7 cut(s) 222, 242, 535, 562, 804, 836, 925
HpyAV CCTTC 2 cut(s) 299, 460
HpyCH4III ACNGT 3 cut(s) 214, 869, 1115
HpyF10VI GCNNNNNNNGC 2 cut(s) 395, 1241
HpyF3I CTNAG 1 cut(s) 250
Hsp92II CATG 3 cut(s) 120, 1015, 1228
HspAI GCGC 1 cut(s) 1046
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 5 cut(s) 229, 496, 617, 778, 983
LmnI GCTCC 3 cut(s) 611, 1243, 1249
Lsp1109I GCAGC 2 cut(s) 1108, 1247
LweI GCATC 4 cut(s) 345, 736, 1033, 1126
MabI ACCWGGT 1 cut(s) 1031
MaeI CTAG 1 cut(s) 458
MaeIII GTNAC 1 cut(s) 871
MalI GATC 5 cut(s) 231, 498, 619, 780, 985
MboI GATC 5 cut(s) 229, 496, 617, 778, 983
MhlI GDGCHC 1 cut(s) 89
MlyI GAGTC 3 cut(s) 207, 335, 400
MmeI TCCRAC 2 cut(s) 949, 1017
MroXI GAANNNNTTC 1 cut(s) 961
MseI TTAA 3 cut(s) 95, 360, 686
MspI CCGG 2 cut(s) 132, 1331
MspR9I CCNGG 4 cut(s) 909, 930, 1033, 1331
MvaI CCWGG 3 cut(s) 909, 930, 1033
MwoI GCNNNNNNNGC 2 cut(s) 395, 1241
NciI CCSGG 1 cut(s) 1331
NdeII GATC 5 cut(s) 229, 496, 617, 778, 983
NheI GCTAGC 1 cut(s) 457
NlaIII CATG 3 cut(s) 120, 1015, 1228
NmuCI GTSAC 1 cut(s) 871
NspV TTCGAA 1 cut(s) 1196
PceI AGGCCT 1 cut(s) 1094
PdmI GAANNNNTTC 1 cut(s) 961
PfeI GAWTC 3 cut(s) 757, 917, 1337
PflMI CCANNNNNTGG 1 cut(s) 810
PfoI TCCNGGA 1 cut(s) 907
PkrI GCNGC 2 cut(s) 1123, 1237
PleI GAGTC 3 cut(s) 206, 334, 399
PpsI GAGTC 3 cut(s) 206, 334, 399
Psp6I CCWGG 3 cut(s) 907, 928, 1031
PspGI CCWGG 3 cut(s) 907, 928, 1031
PspPI GGNCC 1 cut(s) 801
PstI CTGCAG 4 cut(s) 69, 229, 1126, 1237
PstNI CAGNNNCTG 2 cut(s) 494, 1032
RsaI GTAC 4 cut(s) 383, 422, 554, 1192
RsaNI GTAC 4 cut(s) 382, 421, 553, 1191
SaqAI TTAA 3 cut(s) 95, 360, 686
SatI GCNGC 2 cut(s) 1122, 1236
Sau3AI GATC 5 cut(s) 229, 496, 617, 778, 983
Sau96I GGNCC 1 cut(s) 801
SchI GAGTC 3 cut(s) 207, 335, 400
ScrFI CCNGG 4 cut(s) 909, 930, 1033, 1331
SduI GDGCHC 1 cut(s) 89
SexAI ACCWGGT 1 cut(s) 1031
SfaNI GCATC 4 cut(s) 345, 736, 1033, 1126
SfcI CTRYAG 5 cut(s) 65, 225, 1122, 1144, 1233
SfuI TTCGAA 1 cut(s) 1196
SinI GGWCC 1 cut(s) 801
SmlI CTYRAG 1 cut(s) 1211
SmoI CTYRAG 1 cut(s) 1211
SseBI AGGCCT 1 cut(s) 1094
SsiI CCGC 1 cut(s) 852
SspI AATATT 1 cut(s) 584
SspMI CTAG 1 cut(s) 458
StuI AGGCCT 1 cut(s) 1094
StyD4I CCNGG 4 cut(s) 907, 928, 1031, 1329
TaaI ACNGT 3 cut(s) 214, 869, 1115
TaqI TCGA 6 cut(s) 232, 299, 353, 718, 986, 1196
TaqII GACCGA 1 cut(s) 465
TatI WGTACW 1 cut(s) 381
TfiI GAWTC 3 cut(s) 757, 917, 1337
Tru1I TTAA 3 cut(s) 95, 360, 686
Tru9I TTAA 3 cut(s) 95, 360, 686
TscAI CASTG 1 cut(s) 459
TseFI GTSAC 1 cut(s) 871
TseI GCWGC 2 cut(s) 1121, 1235
Tsp45I GTSAC 1 cut(s) 871
TspDTI ATGAA 4 cut(s) 576, 585, 1287, 1350
TspGWI ACGGA 3 cut(s) 506, 552, 839
TspRI CASTG 1 cut(s) 459
Van91I CCANNNNNTGG 1 cut(s) 810
VpaK11BI GGWCC 1 cut(s) 801
XagI CCTNNNNNAGG 1 cut(s) 1214
XapI RAATTY 4 cut(s) 634, 682, 958, 1287
XcmI CCANNNNNNNNNTGG 1 cut(s) 1018
XmnI GAANNNNTTC 1 cut(s) 961
XspI CTAG 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.