Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000479

Physical Location & Seq

Genomic Coordinates Forward (+)

59517472 .. 59535968

Gene Structure 18497 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00124960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGCTTGACTCGGGTAACTTTGTACTATACGACTCCGATCAGGAAATAGTATGGCAAAGTTTTGACGTTCCAACTGATACTATCCTGCCAAAACAGCGTTTGAGAGCAGGGGCATTGCTGTACTCTGCTAAATCCGAAAGTAATAGCTCAACCGGCATTTTCCGTCTCAGTATGCAAACTGATGGAAACCTTGTTCAGTTCCCAGTATCTGCCCCGGCAAGTACTCCGTATGAGTACTATACATCTAAGACACCAGGAAGTGGAGACAATGTGACACTAAACCTGGATGTTGATGGCCATCTCTATTTACTCAACAACACTGGTTTCACTATACACAATTTTACGAATGGAGCTACTGATGAAGGCAAATCTTATCTTGTGAGACTTGATGTAGATGGAATTCTTCGCTTGTATTCATATAGTTTGAAGCAGAATGGAAACTGGTCAGTTGAGTGGTCATCTACAAGAGACAAGTGTGACCCTTTAGGTCTATGCGGATTTAATAGTTACTGTGTCACAAGAGATATGGAAGCTGAATGCAAATGCCTTCCAGGATTTGAGCCTATCACGCCAGGGGATCAGACTTCAGGCTGTGGGAGGAATATAGTTGCAGATATTTGCAGGTCAGAGAATGAAAACTTCACCTACATCATGGAAGAACTGCCCAGCACAAGATGGCAAAATTTTGCATACATGACTTTGCCATTATCAAACAAAGAAGAGTGCAACAAGGTCTGCTTGGAGGATTGCAACTGTGAAGCCGCACTTTTCGCAGATGGAAGCTGCAGAAAGCAGAGGCTTCCTTTGACTTATGGAAGAAGAATGTTAGATATTTCAAACTCAGCTTTCATCAAAGTTGGTATTTCTAAACCTCCAGCTACAGATAATATTATCCATCCAAAGGGAAACAAGAAAGAAGGTCCAGTTGTAGTCCTTATTGTTGGAGTTTCATTTACTGCTTTTGGGTCCATTTTGTTGGTGATCTCTGCAATTGTGTTTTGGAAGCATAATGTTTGGGCTTATAAAAGGATGAATAAGCTCAATGGTGATGTTGAATGGAATGAGGATGTGGCTCCGCGACCATATGCCTATGAACAGCTAGAGAAGATGACTGATAATTTCAAGGAGGAAGTTGGTAGAGGAGCTTCTGCAACAGTTTATAAAGGGGTGATGTTGAGTGGCCAAAAGCTAGTTGCTGTGAAGAAACTAGAGAAAGTTGCAGCTGAAGGAGCAAAAGAATTCGAGACTGAGATGAAAGTTATTGGCAGATCACATCACCGGAGTTTAGTACGTTTGCTTGGGTATTGCCTTGATGGACCAAAGAAGCTTTTGGTGTATGAGTACATGAGCAATGGATCACTTGCAGATATACTCTTCACACCTGAGAGGAGACCTTATTGGGAAGAAAGAATGGGAATTGCTCGAAACATAGCACGGGGTTTTCTTTATCTGCATGAAGAGTGTGATACACAGATCATCCACTGTGACATAAAGCCTCAAAACATACTGATGGATGAGTACATGTGCCCCAAAATCTCTGACTTTGGTTTGGCAAAGTTGCTTCAGCAAGACCAGACTAGAACCACTACCGGTATTAGAGGGACTAAAGGGTACGTTGCACCTGAGTGGCATAGGAAAATGCCTATTACAGTTAAAGCAGATGTTTATAGCTTTGGAATTGTGCTATTGGAGATTGTGTGCTGTCGAAGGAATGTGGACTGGAGTGTTCCTGAGGAGGAAGCTATCTTGGATGAATTGGTCTACCATTACTTCGAGAGTGGTGAGCTCAGTAAATTGCTCGGGGATGAAGAGATAAACAGAAGGCAATTTGAAAGGGTGATTAAAGTGGGACTTTGGTGCATCCAGGATGAGCCATCGCTTCGTCCTTCTATGAAGAAGGTTTTGCTTATGTTGGAAGGGACTGTGGACATCCCAATCCCTCCGAATCCAAGTTCTTTTCTCAATACTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

657

Amino Acids

74.17

Weight (kDa)

5.54

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	1 - 35	2.8e-08	D-mannose binding lectin
S_locus_glycop	PF00954	115 - 188	4.2e-10	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	374 - 635	4e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	375 - 635	1.3e-45	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000479)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23370 FvH4_1g23380
malus_domestica	MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica	Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis	pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis	RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata	RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora	Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa	Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha	Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana	Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1023, 1161
Acc36I	ACCTGC	1 cut(s)	612
AccB7I	CCANNNNNTGG	1 cut(s)	260
AccI	GTMKAC	1 cut(s)	1761
AccII	CGCG	1 cut(s)	1078
AciI	CCGC	3 cut(s)	495, 762, 1076
AclWI	GGATC	2 cut(s)	585, 1363
AcoI	YGGCCR	2 cut(s)	295, 1180
AcsI	RAATTY	3 cut(s)	399, 682, 1238
AcuI	CTGAAG	3 cut(s)	570, 1245, 1547
AfaI	GTAC	8 cut(s)	24, 122, 223, 236, 1290, 1343, 1520, 1613
AfiI	CCNNNNNNNGG	2 cut(s)	260, 901
AflIII	ACRYGT	1 cut(s)	1521
AgeI	ACCGGT	1 cut(s)	1589
AgsI	TTSAA	5 cut(s)	427, 837, 1055, 1123, 1832
AjnI	CCWGG	5 cut(s)	253, 282, 550, 571, 1863
AleI	CACNNNNGTG	1 cut(s)	1624
AloI	GAACNNNNNNTCC	2 cut(s)	177, 209
Alw21I	GWGCWC	1 cut(s)	1788
Alw26I	GTCTC	6 cut(s)	170, 258, 376, 462, 1238, 1384
AlwI	GGATC	2 cut(s)	585, 1363
AlwNI	CAGNNNCTG	1 cut(s)	209
Ama87I	CYCGRG	2 cut(s)	10, 1799
AoxI	GGCC	2 cut(s)	295, 1180
ApeKI	GCWGC	2 cut(s)	783, 1220
ApoI	RAATTY	3 cut(s)	399, 682, 1238
AsiGI	ACCGGT	1 cut(s)	1589
AspS9I	GGNCC	3 cut(s)	920, 966, 1316
AsuC2I	CCSGG	1 cut(s)	215
AsuHPI	GGTGA	7 cut(s)	634, 991, 1058, 1180, 1268, 1793, 1849
AvaI	CYCGRG	2 cut(s)	10, 1799
AvaII	GGWCC	3 cut(s)	920, 966, 1316
AxyI	CCTNAGG	1 cut(s)	1731
BaeGI	GKGCMC	1 cut(s)	1529
BalI	TGGCCA	2 cut(s)	297, 1182
BanII	GRGCYC	1 cut(s)	1788
BarI	GAAGNNNNNNTAC	2 cut(s)	1129, 1161
Bbv12I	GWGCWC	1 cut(s)	1788
BbvI	GCAGC	2 cut(s)	770, 1232
BciT130I	CCWGG	5 cut(s)	255, 284, 552, 573, 1865
BcnI	CCSGG	1 cut(s)	215
BcoDI	GTCTC	6 cut(s)	170, 258, 376, 462, 1238, 1384
BfaI	CTAG	4 cut(s)	1100, 1190, 1208, 1578
BfmI	CTRYAG	2 cut(s)	784, 879
BfuAI	ACCTGC	1 cut(s)	612
BisI	GCNGC	3 cut(s)	762, 784, 1221
BlsI	GCNGC	3 cut(s)	763, 785, 1222
BmcAI	AGTACT	2 cut(s)	223, 236
Bme1390I	CCNGG	6 cut(s)	215, 255, 284, 552, 573, 1865
Bme18I	GGWCC	3 cut(s)	920, 966, 1316
BmeT110I	CYCGRG	2 cut(s)	10, 1799
BmgT120I	GGNCC	3 cut(s)	920, 966, 1316
BmiI	GGNNCC	2 cut(s)	967, 1074
BmrFI	CCNGG	6 cut(s)	215, 255, 284, 552, 573, 1865
BmrI	ACTGGG	1 cut(s)	197
BmsI	GCATC	1 cut(s)	1869
BmuI	ACTGGG	1 cut(s)	197
BpmI	CTGGAG	2 cut(s)	858, 1741
BpuMI	CCSGG	1 cut(s)	215
BsaBI	GATNNNNATC	1 cut(s)	297
BsaI	GGTCTC	1 cut(s)	1384
BsaJI	CCNNGG	2 cut(s)	213, 572
BsaWI	WCCGGW	2 cut(s)	1278, 1589
BsaXI	ACNNNNNCTCC	4 cut(s)	255, 285, 1682, 1712
Bsc4I	CCNNNNNNNGG	2 cut(s)	260, 901
Bse118I	RCCGGY	2 cut(s)	152, 1589
Bse1I	ACTGG	5 cut(s)	203, 325, 446, 923, 1724
Bse21I	CCTNAGG	1 cut(s)	1731
Bse3DI	GCAATG	2 cut(s)	113, 1357
Bse8I	GATNNNNATC	1 cut(s)	297
BseBI	CCWGG	5 cut(s)	255, 284, 552, 573, 1865
BseDI	CCNNGG	2 cut(s)	213, 572
BseJI	GATNNNNATC	1 cut(s)	297
BseLI	CCNNNNNNNGG	2 cut(s)	260, 901
BseMI	GCAATG	2 cut(s)	113, 1357
BseMII	CTCAG	7 cut(s)	181, 855, 1239, 1374, 1614, 1722, 1801
BseNI	ACTGG	5 cut(s)	203, 325, 446, 923, 1724
BseRI	GAGGAG	3 cut(s)	1155, 1402, 1748
BseSI	GKGCMC	1 cut(s)	1529
BseXI	GCAGC	2 cut(s)	770, 1232
BseYI	CCCAGC	1 cut(s)	665
Bsh1236I	CGCG	1 cut(s)	1078
BshFI	GGCC	2 cut(s)	297, 1182
BshTI	ACCGGT	1 cut(s)	1589
BsiHKAI	GWGCWC	1 cut(s)	1788
BsiHKCI	CYCGRG	2 cut(s)	10, 1799
BsiSI	CCGG	4 cut(s)	153, 215, 1279, 1590
BslFI	GGGAC	3 cut(s)	1615, 1863, 1933
BslI	CCNNNNNNNGG	2 cut(s)	260, 901
BsmAI	GTCTC	6 cut(s)	170, 258, 376, 462, 1238, 1384
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	3 cut(s)	1615, 1863, 1933
BsmI	GAATGC	1 cut(s)	542
BsnI	GGCC	2 cut(s)	297, 1182
Bso31I	GGTCTC	1 cut(s)	1384
BsoBI	CYCGRG	2 cut(s)	10, 1799
Bsp1286I	GDGCHC	2 cut(s)	1529, 1788
Bsp143I	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
BspACI	CCGC	3 cut(s)	495, 762, 1076
BspANI	GGCC	2 cut(s)	297, 1182
BspCNI	CTCAG	7 cut(s)	180, 854, 1240, 1375, 1615, 1723, 1800
BspFNI	CGCG	1 cut(s)	1078
BspLI	GGNNCC	2 cut(s)	967, 1074
BspMAI	CTGCAG	1 cut(s)	788
BspMI	ACCTGC	1 cut(s)	612
BspPI	GGATC	2 cut(s)	585, 1363
BspTNI	GGTCTC	1 cut(s)	1384
BsrDI	GCAATG	2 cut(s)	113, 1357
BsrFI	RCCGGY	2 cut(s)	152, 1589
BsrI	ACTGG	5 cut(s)	203, 325, 446, 923, 1724
BssAI	RCCGGY	2 cut(s)	152, 1589
BssECI	CCNNGG	2 cut(s)	213, 572
BssMI	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
Bst2UI	CCWGG	5 cut(s)	255, 284, 552, 573, 1865
Bst4CI	ACNGT	6 cut(s)	512, 755, 1156, 1484, 1651, 1924
Bst6I	CTCTTC	4 cut(s)	714, 1379, 1452, 1803
BstDEI	CTNAG	8 cut(s)	167, 246, 841, 1248, 1383, 1623, 1731, 1787
BstFNI	CGCG	1 cut(s)	1078
BstKTI	GATC	6 cut(s)	40, 580, 984, 1271, 1358, 1476
BstMAI	GTCTC	6 cut(s)	170, 258, 376, 462, 1238, 1384
BstMBI	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
BstMWI	GCNNNNNNNGC	5 cut(s)	94, 153, 568, 770, 1229
BstNI	CCWGG	5 cut(s)	255, 284, 552, 573, 1865
BstNSI	RCATGY	1 cut(s)	1525
BstSCI	CCNGG	6 cut(s)	213, 253, 282, 550, 571, 1863
BstSFI	CTRYAG	2 cut(s)	784, 879
BstSLI	GKGCMC	1 cut(s)	1529
BstUI	CGCG	1 cut(s)	1078
BstV1I	GCAGC	2 cut(s)	770, 1232
BstXI	CCANNNNNNTGG	1 cut(s)	976
Bsu36I	CCTNAGG	1 cut(s)	1731
BsuRI	GGCC	2 cut(s)	297, 1182
BtgZI	GCGATG	1 cut(s)	1860
BtsIMutI	CAGTG	2 cut(s)	318, 1480
BveI	ACCTGC	1 cut(s)	612
CaiI	CAGNNNCTG	1 cut(s)	209
Cfr10I	RCCGGY	2 cut(s)	152, 1589
Cfr13I	GGNCC	3 cut(s)	920, 966, 1316
Csp6I	GTAC	8 cut(s)	23, 121, 222, 235, 1289, 1342, 1519, 1612
CspAI	ACCGGT	1 cut(s)	1589
CviAII	CATG	5 cut(s)	652, 694, 1345, 1454, 1522
CviQI	GTAC	8 cut(s)	23, 121, 222, 235, 1289, 1342, 1519, 1612
DdeI	CTNAG	8 cut(s)	167, 246, 841, 1248, 1383, 1623, 1731, 1787
DpnI	GATC	6 cut(s)	39, 579, 983, 1270, 1357, 1475
DpnII	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
EaeI	YGGCCR	2 cut(s)	295, 1180
Eam1104I	CTCTTC	4 cut(s)	714, 1379, 1452, 1803
EarI	CTCTTC	4 cut(s)	714, 1379, 1452, 1803
Ecl136II	GAGCTC	1 cut(s)	1786
Eco24I	GRGCYC	1 cut(s)	1788
Eco31I	GGTCTC	1 cut(s)	1384
Eco47I	GGWCC	3 cut(s)	920, 966, 1316
Eco53kI	GAGCTC	1 cut(s)	1786
Eco57I	CTGAAG	3 cut(s)	570, 1245, 1547
Eco81I	CCTNAGG	1 cut(s)	1731
Eco88I	CYCGRG	2 cut(s)	10, 1799
EcoICRI	GAGCTC	1 cut(s)	1786
EcoRI	GAATTC	2 cut(s)	399, 1238
EcoRII	CCWGG	5 cut(s)	253, 282, 550, 571, 1863
EcoT38I	GRGCYC	1 cut(s)	1788
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	5 cut(s)	655, 697, 1348, 1457, 1525
FalI	AAGNNNNNCTT	6 cut(s)	722, 754, 750, 782, 1836, 1868
FaqI	GGGAC	3 cut(s)	1615, 1863, 1933
FatI	CATG	5 cut(s)	651, 693, 1344, 1453, 1521
FauNDI	CATATG	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	1761
Fnu4HI	GCNGC	3 cut(s)	762, 784, 1221
FriOI	GRGCYC	1 cut(s)	1788
Fsp4HI	GCNGC	3 cut(s)	762, 784, 1221
FspBI	CTAG	4 cut(s)	1100, 1190, 1208, 1578
GluI	GCNGC	3 cut(s)	762, 784, 1221
GsaI	CCCAGC	1 cut(s)	669
GsuI	CTGGAG	2 cut(s)	858, 1741
HaeIII	GGCC	2 cut(s)	297, 1182
HapII	CCGG	4 cut(s)	153, 215, 1279, 1590
Hin1II	CATG	5 cut(s)	655, 697, 1348, 1457, 1525
HindIII	AAGCTT	1 cut(s)	1325
HinfI	GANTC	3 cut(s)	8, 32, 1945
HpaII	CCGG	4 cut(s)	153, 215, 1279, 1590
HphI	GGTGA	7 cut(s)	634, 991, 1058, 1180, 1268, 1793, 1849
Hpy166II	GTNNAC	3 cut(s)	1717, 1762, 1927
Hpy188I	TCNGA	6 cut(s)	37, 136, 582, 628, 1540, 1944
Hpy188III	TCNNGA	4 cut(s)	41, 1243, 1730, 1774
Hpy8I	GTNNAC	3 cut(s)	1717, 1762, 1927
HpyAV	CCTTC	9 cut(s)	356, 557, 911, 1220, 1701, 1815, 1891, 1896, 1910
HpyCH4III	ACNGT	6 cut(s)	512, 755, 1156, 1484, 1651, 1924
HpyCH4IV	ACGT	3 cut(s)	66, 1291, 1614
HpyF10VI	GCNNNNNNNGC	5 cut(s)	94, 153, 568, 770, 1229
HpyF3I	CTNAG	8 cut(s)	167, 246, 841, 1248, 1383, 1623, 1731, 1787
HpySE526I	ACGT	3 cut(s)	66, 1291, 1614
Hsp92II	CATG	5 cut(s)	655, 697, 1348, 1457, 1525
Kzo9I	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
LmnI	GCTCC	4 cut(s)	350, 1078, 1142, 1229
Lsp1109I	GCAGC	2 cut(s)	770, 1232
LweI	GCATC	1 cut(s)	1869
MaeI	CTAG	4 cut(s)	1100, 1190, 1208, 1578
MaeII	ACGT	3 cut(s)	66, 1291, 1614
MaeIII	GTNAC	6 cut(s)	14, 271, 476, 506, 514, 1484
MalI	GATC	6 cut(s)	39, 579, 983, 1270, 1357, 1475
MboI	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
MfeI	CAATTG	1 cut(s)	990
MhlI	GDGCHC	2 cut(s)	1529, 1788
MlsI	TGGCCA	2 cut(s)	297, 1182
MluNI	TGGCCA	2 cut(s)	297, 1182
MlyI	GAGTC	2 cut(s)	2, 26
MmeI	TCCRAC	3 cut(s)	95, 922, 1893
Mox20I	TGGCCA	2 cut(s)	297, 1182
MscI	TGGCCA	2 cut(s)	297, 1182
MseI	TTAA	3 cut(s)	501, 1653, 1842
MslI	CAYNNNNRTG	2 cut(s)	1508, 1624
Msp20I	TGGCCA	2 cut(s)	297, 1182
MspA1I	CMGCKG	1 cut(s)	1223
MspI	CCGG	4 cut(s)	153, 215, 1279, 1590
MspR9I	CCNGG	6 cut(s)	215, 255, 284, 552, 573, 1865
MunI	CAATTG	1 cut(s)	990
Mva1269I	GAATGC	1 cut(s)	542
MvaI	CCWGG	5 cut(s)	255, 284, 552, 573, 1865
MvnI	CGCG	1 cut(s)	1078
MwoI	GCNNNNNNNGC	5 cut(s)	94, 153, 568, 770, 1229
NciI	CCSGG	1 cut(s)	215
NdeI	CATATG	1 cut(s)	1084
NdeII	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
NlaIII	CATG	5 cut(s)	655, 697, 1348, 1457, 1525
NlaIV	GGNNCC	2 cut(s)	967, 1074
NmuCI	GTSAC	4 cut(s)	271, 476, 514, 1484
NspI	RCATGY	1 cut(s)	1525
OliI	CACNNNNGTG	1 cut(s)	1624
PciI	ACATGT	1 cut(s)	1521
PctI	GAATGC	1 cut(s)	542
PfeI	GAWTC	1 cut(s)	1945
PflMI	CCANNNNNTGG	1 cut(s)	260
PfoI	TCCNGGA	2 cut(s)	550, 1863
PinAI	ACCGGT	1 cut(s)	1589
PkrI	GCNGC	3 cut(s)	763, 785, 1222
PleI	GAGTC	2 cut(s)	2, 26
PpsI	GAGTC	2 cut(s)	2, 26
PscI	ACATGT	1 cut(s)	1521
PsiI	TTATAA	2 cut(s)	1023, 1161
Psp124BI	GAGCTC	1 cut(s)	1788
Psp6I	CCWGG	5 cut(s)	253, 282, 550, 571, 1863
PspFI	CCCAGC	1 cut(s)	665
PspGI	CCWGG	5 cut(s)	253, 282, 550, 571, 1863
PspN4I	GGNNCC	2 cut(s)	967, 1074
PspPI	GGNCC	3 cut(s)	920, 966, 1316
PstI	CTGCAG	1 cut(s)	788
PstNI	CAGNNNCTG	1 cut(s)	209
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	8 cut(s)	24, 122, 223, 236, 1290, 1343, 1520, 1613
RsaNI	GTAC	8 cut(s)	23, 121, 222, 235, 1289, 1342, 1519, 1612
RseI	CAYNNNNRTG	2 cut(s)	1508, 1624
SacI	GAGCTC	1 cut(s)	1788
SaqAI	TTAA	3 cut(s)	501, 1653, 1842
SatI	GCNGC	3 cut(s)	762, 784, 1221
Sau3AI	GATC	6 cut(s)	37, 577, 981, 1268, 1355, 1473
Sau96I	GGNCC	3 cut(s)	920, 966, 1316
ScaI	AGTACT	2 cut(s)	223, 236
SchI	GAGTC	2 cut(s)	2, 26
ScrFI	CCNGG	6 cut(s)	215, 255, 284, 552, 573, 1865
SduI	GDGCHC	2 cut(s)	1529, 1788
SfaNI	GCATC	1 cut(s)	1869
SfcI	CTRYAG	2 cut(s)	784, 879
SinI	GGWCC	3 cut(s)	920, 966, 1316
SmiMI	CAYNNNNRTG	2 cut(s)	1508, 1624
SsiI	CCGC	3 cut(s)	495, 762, 1076
SspI	AATATT	1 cut(s)	889
SspMI	CTAG	4 cut(s)	1100, 1190, 1208, 1578
SstI	GAGCTC	1 cut(s)	1788
StyD4I	CCNGG	6 cut(s)	213, 253, 282, 550, 571, 1863
TaaI	ACNGT	6 cut(s)	512, 755, 1156, 1484, 1651, 1924
TaiI	ACGT	3 cut(s)	69, 1294, 1617
TaqI	TCGA	4 cut(s)	1242, 1423, 1705, 1773
TatI	WGTACW	6 cut(s)	22, 120, 221, 234, 1341, 1518
TauI	GCSGC	1 cut(s)	764
TfiI	GAWTC	1 cut(s)	1945
Tru1I	TTAA	3 cut(s)	501, 1653, 1842
Tru9I	TTAA	3 cut(s)	501, 1653, 1842
TscAI	CASTG	2 cut(s)	325, 1487
TseFI	GTSAC	4 cut(s)	271, 476, 514, 1484
TseI	GCWGC	2 cut(s)	783, 1220
Tsp45I	GTSAC	4 cut(s)	271, 476, 514, 1484
TspGWI	ACGGA	2 cut(s)	152, 216
TspRI	CASTG	2 cut(s)	325, 1487
Van91I	CCANNNNNTGG	1 cut(s)	260
VpaK11BI	GGWCC	3 cut(s)	920, 966, 1316
XapI	RAATTY	3 cut(s)	399, 682, 1238
XceI	RCATGY	1 cut(s)	1525
XmiI	GTMKAC	1 cut(s)	1761
XspI	CTAG	4 cut(s)	1100, 1190, 1208, 1578
ZrmI	AGTACT	2 cut(s)	223, 236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.