Rmu_sc0008015.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008015.1
Physical Location & Seq
Reverse (-)
2 .. 919
918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008015.1_g000001.1.cds

Sequence Viewer

Length: 918 bp
atgacttggtcatcatcagacaaagaagaatgcaacaaggcctgcttggaggattgcaactgtgaagccgcacttttcgcagatggaagctgcagaaagcagaggcttcctttgagtcatggaagaagaaggtatgacacttcaaactcagttttcattaaggttggtaaatctaaacctccagctacagataatatccattcaaagggaaacaagaaagaaggtggagttgcagtccttattattggggtttcttttactacttttgggtccattttgttggtgatatctgtaattgtgttttggaaacataatgtttgggcatataaaaggatgaataaactcaatggtgatgttgaatggaatgaggatgtggctccgcaaccatatgcttatgaacaactagagaagatgactgataatttcaaggaggaggtcagtagaggagcttctgcaacagtttataaaggggtgatgttgagtagtcaaaagcttgttgctgtgaagaaactacagaaagttgcagctgaaggagcaaaagaattccagactgagacgaaagttattggcagaacccatcaccggagtatagtacgtttgcttgggtattgccttgatggaccaaagaagcttttggtgtatgagtacatgagcaatggttcacttgcagatattctcttcacacctgagaggaaacctcattgggaagaaagaatgggaattgctcaaaacatagcacgagggtttctttatctgcatgaagagtgtgatacacagatcatccactgtaacataaagcctcaaaacatattgatggatgagtatatgttccccaaaatctccgattttggtttggcaaagctgcttcagcaagaccagactagaaccactaccggcattagagggactaaagggtat

Protein Analysis

306

Amino Acids

34.61

Weight (kDa)

8.95

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 465
AciI CCGC 2 cut(s) 69, 380
AcsI RAATTY 1 cut(s) 542
AcuI CTGAAG 2 cut(s) 549, 851
AfaI GTAC 2 cut(s) 594, 647
AfiI CCNNNNNNNGG 2 cut(s) 205, 582
AgsI TTSAA 4 cut(s) 144, 204, 359, 427
AluBI AGCT 7 cut(s) 90, 185, 449, 493, 527, 631, 862
AluI AGCT 7 cut(s) 90, 185, 449, 493, 527, 631, 862
Alw26I GTCTC 1 cut(s) 548
AoxI GGCC 1 cut(s) 39
ApeKI GCWGC 3 cut(s) 90, 524, 862
ApoI RAATTY 1 cut(s) 542
AspS9I GGNCC 2 cut(s) 270, 620
AsuHPI GGTGA 4 cut(s) 295, 362, 484, 572
AvaII GGWCC 2 cut(s) 270, 620
BarI GAAGNNNNNNTAC 2 cut(s) 433, 465
BauI CACGAG 1 cut(s) 738
BbvI GCAGC 3 cut(s) 77, 536, 849
BccI CCATC 4 cut(s) 77, 585, 611, 808
BcoDI GTCTC 1 cut(s) 548
BfaI CTAG 2 cut(s) 404, 882
BfmI CTRYAG 3 cut(s) 91, 186, 512
BisI GCNGC 4 cut(s) 69, 91, 525, 863
BlsI GCNGC 4 cut(s) 70, 92, 526, 864
Bme18I GGWCC 2 cut(s) 270, 620
BmgT120I GGNCC 2 cut(s) 270, 620
BmiI GGNNCC 2 cut(s) 271, 378
BplI GAGNNNNNCTC 2 cut(s) 682, 714
BpmI CTGGAG 1 cut(s) 165
BsaWI WCCGGW 1 cut(s) 582
BsaXI ACNNNNNCTCC 2 cut(s) 219, 249
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 582
Bse118I RCCGGY 1 cut(s) 893
Bse3DI GCAATG 1 cut(s) 661
BseGI GGATG 4 cut(s) 339, 376, 780, 823
BseLI CCNNNNNNNGG 2 cut(s) 205, 582
BseMI GCAATG 1 cut(s) 661
BseMII CTCAG 3 cut(s) 162, 543, 678
BseRI GAGGAG 2 cut(s) 446, 459
BseXI GCAGC 3 cut(s) 77, 536, 849
BshFI GGCC 1 cut(s) 41
BsiSI CCGG 2 cut(s) 583, 894
BslI CCNNNNNNNGG 2 cut(s) 205, 582
BsmAI GTCTC 1 cut(s) 548
BsmBI CGTCTC 1 cut(s) 548
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 1 cut(s) 41
Bsp143I GATC 1 cut(s) 777
BspACI CCGC 2 cut(s) 69, 380
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 3 cut(s) 161, 544, 679
BspLI GGNNCC 2 cut(s) 271, 378
BspMAI CTGCAG 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 661
BsrFI RCCGGY 1 cut(s) 893
BssAI RCCGGY 1 cut(s) 893
BssMI GATC 1 cut(s) 777
BssSI CACGAG 1 cut(s) 738
Bst2BI CACGAG 1 cut(s) 738
Bst4CI ACNGT 3 cut(s) 62, 460, 788
Bst6I CTCTTC 2 cut(s) 683, 756
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 3 cut(s) 148, 552, 687
BstF5I GGATG 4 cut(s) 339, 376, 780, 823
BstKTI GATC 1 cut(s) 780
BstMAI GTCTC 1 cut(s) 548
BstMBI GATC 1 cut(s) 777
BstMWI GCNNNNNNNGC 3 cut(s) 77, 533, 868
BstSFI CTRYAG 3 cut(s) 91, 186, 512
BstV1I GCAGC 3 cut(s) 77, 536, 849
BstXI CCANNNNNNTGG 1 cut(s) 280
BsuRI GGCC 1 cut(s) 41
BtsCI GGATG 4 cut(s) 339, 376, 780, 823
BtsIMutI CAGTG 1 cut(s) 784
Cac8I GCNNGC 1 cut(s) 43
Cfr10I RCCGGY 1 cut(s) 893
Cfr13I GGNCC 2 cut(s) 270, 620
Csp6I GTAC 2 cut(s) 593, 646
CviAII CATG 3 cut(s) 119, 649, 758
CviQI GTAC 2 cut(s) 593, 646
DdeI CTNAG 3 cut(s) 148, 552, 687
DpnI GATC 1 cut(s) 779
DpnII GATC 1 cut(s) 777
Eam1104I CTCTTC 2 cut(s) 683, 756
EarI CTCTTC 2 cut(s) 683, 756
Eco147I AGGCCT 1 cut(s) 41
Eco32I GATATC 1 cut(s) 288
Eco47I GGWCC 2 cut(s) 270, 620
Eco57I CTGAAG 2 cut(s) 549, 851
EcoRI GAATTC 1 cut(s) 542
EcoRV GATATC 1 cut(s) 288
Esp3I CGTCTC 1 cut(s) 548
FaeI CATG 3 cut(s) 122, 652, 761
FalI AAGNNNNNCTT 4 cut(s) 29, 61, 57, 89
FatI CATG 3 cut(s) 118, 648, 757
FauNDI CATATG 1 cut(s) 388
Fnu4HI GCNGC 4 cut(s) 69, 91, 525, 863
FokI GGATG 4 cut(s) 346, 383, 767, 830
Fsp4HI GCNGC 4 cut(s) 69, 91, 525, 863
FspBI CTAG 2 cut(s) 404, 882
GluI GCNGC 4 cut(s) 69, 91, 525, 863
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 1 cut(s) 41
HapII CCGG 2 cut(s) 583, 894
Hin1II CATG 3 cut(s) 122, 652, 761
HindIII AAGCTT 2 cut(s) 491, 629
HinfI GANTC 1 cut(s) 115
HpaII CCGG 2 cut(s) 583, 894
HphI GGTGA 4 cut(s) 295, 362, 484, 572
Hpy166II GTNNAC 1 cut(s) 662
Hpy188I TCNGA 2 cut(s) 19, 844
Hpy188III TCNNGA 1 cut(s) 547
Hpy8I GTNNAC 1 cut(s) 662
HpyAV CCTTC 3 cut(s) 123, 215, 524
HpyCH4III ACNGT 3 cut(s) 62, 460, 788
HpyCH4IV ACGT 1 cut(s) 595
HpyCH4V TGCA 8 cut(s) 33, 57, 93, 233, 455, 524, 668, 757
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 533, 868
HpyF3I CTNAG 3 cut(s) 148, 552, 687
HpySE526I ACGT 1 cut(s) 595
Hsp92II CATG 3 cut(s) 122, 652, 761
Kzo9I GATC 1 cut(s) 777
LmnI GCTCC 3 cut(s) 382, 446, 533
LpnPI CCDG 7 cut(s) 55, 195, 560, 596, 699, 890, 907
Lsp1109I GCAGC 3 cut(s) 77, 536, 849
MaeI CTAG 2 cut(s) 404, 882
MaeII ACGT 1 cut(s) 595
MaeIII GTNAC 1 cut(s) 788
MalI GATC 1 cut(s) 779
MboI GATC 1 cut(s) 777
MboII GAAGA 8 cut(s) 38, 135, 138, 421, 517, 670, 719, 773
MluCI AATT 4 cut(s) 294, 421, 542, 720
MlyI GAGTC 1 cut(s) 124
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 1 cut(s) 812
MspA1I CMGCKG 1 cut(s) 527
MspI CCGG 2 cut(s) 583, 894
Mva1269I GAATGC 1 cut(s) 35
MwoI GCNNNNNNNGC 3 cut(s) 77, 533, 868
NdeI CATATG 1 cut(s) 388
NdeII GATC 1 cut(s) 777
NlaIII CATG 3 cut(s) 122, 652, 761
NlaIV GGNNCC 2 cut(s) 271, 378
PceI AGGCCT 1 cut(s) 41
PctI GAATGC 1 cut(s) 35
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 4 cut(s) 70, 92, 526, 864
PleI GAGTC 1 cut(s) 123
PpsI GAGTC 1 cut(s) 123
PsiI TTATAA 1 cut(s) 465
PspN4I GGNNCC 2 cut(s) 271, 378
PspPI GGNCC 2 cut(s) 270, 620
PstI CTGCAG 1 cut(s) 95
PsyI GACNNNGTC 1 cut(s) 7
PvuII CAGCTG 1 cut(s) 527
RsaI GTAC 2 cut(s) 594, 647
RsaNI GTAC 2 cut(s) 593, 646
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 4 cut(s) 69, 91, 525, 863
Sau3AI GATC 1 cut(s) 777
Sau96I GGNCC 2 cut(s) 270, 620
SchI GAGTC 1 cut(s) 124
SfcI CTRYAG 3 cut(s) 91, 186, 512
SinI GGWCC 2 cut(s) 270, 620
SmiMI CAYNNNNRTG 1 cut(s) 812
Sse9I AATT 4 cut(s) 294, 421, 542, 720
SseBI AGGCCT 1 cut(s) 41
SsiI CCGC 2 cut(s) 69, 380
SspMI CTAG 2 cut(s) 404, 882
StuI AGGCCT 1 cut(s) 41
TaaI ACNGT 3 cut(s) 62, 460, 788
TaiI ACGT 1 cut(s) 598
TasI AATT 4 cut(s) 294, 421, 542, 720
TatI WGTACW 1 cut(s) 645
TauI GCSGC 1 cut(s) 71
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 1 cut(s) 791
TseI GCWGC 3 cut(s) 90, 524, 862
TspDTI ATGAA 4 cut(s) 145, 350, 411, 774
TspRI CASTG 1 cut(s) 791
Tth111I GACNNNGTC 1 cut(s) 7
VpaK11BI GGWCC 2 cut(s) 270, 620
XapI RAATTY 1 cut(s) 542
XspI CTAG 2 cut(s) 404, 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.