MD17G1161800.v1.1

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
15952647 .. 15953717
1071 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1161800.v1.1.491

Sequence Viewer

Length: 1071 bp
ATGGGTTCGATGAAGAGGAAGAGACCGGACGAACCAGAGAAGAGCTTTTTCCGTTCGAAATTCGAGTGGGTTCGAGGGCCGATGCTCGGGAGTGGGGGATTCGGGTCGGTTTATCTGGCGACCGTGAAAAAGTCCAAGTTGGGTTGCGAGGGTTTCCCGACGGTGATGGCGGTGAAAACCTTCTCCAAGTCGAGTGAGCTCGCGACGGAAAGTTCGTATCTGACCCTGTTTCGGGACTGCCCTTTTATTATCGGAAGCTATGGAACAAATCTGACCATTGGGGACGATGGTTACTTGAAGTGTAATGTGTTTTTGGAGTATGCCGATGGAGGAACAATTGGGGATTTGATCGAGAAATCGGGCGGCTCAGGGTTGTGTGAATCGGATGTGAGCAAGTATACCAAAGCGATTCTGAAAGGGCTTGAGTACATTCATGAAAGGGGTTATGTGCATTGTGATTTGAAGCCGGATAACATATTGCTTGTGAGATCTGATTCTGGTTTTGTGCCGAAAATTGGGGACTTCGGGTTGGCAAAGATGGCGATGCAGAAGCTGTCACGCCAAGGCACATCAATGTATTTTTCTCCCGAAACTGTGACTCACAAAATTCAGGAGCAGCCTTCCGATATTTGGGCAGTAGGTTGCATTGTACTCGGGATGTTAACGGGGAGACAGCCATGGGAAGCGAAGGGAGGCGCTGACCTAAGGCCTCTTATTGCTTCAAAACTTCCCAATGTTCCCGGCTGGTTATCAGAAGATGCTAAAGACTTTTTGCGAAAATGCCTACTGAGGGACCCTTTCAAGAGATCCACAGTTGCTGAGCTATTGACGCACTCGTTCGTGACAAAACCGGACAGGGTTGGAGAGGTTGAACCAGTAAAGGAGGTTGCTTCAGTGTCATCTCCGGAGCAAGGCGATTATGGAAGCTTTATACCCCTCGGAAGCTGGAGTTCTGAAGAGGCAGTAGATTTTGGGCCAATTCCTCCTGTGGCAGTCTTGAACCCTAGACCGGTTATTCCAAGCACGGCTTGCCAAGGGGCATCAAATTTTGCTGTAATGGGTGCAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

357

Amino Acids

38.66

Weight (kDa)

6.9

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 26 - 281 7.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 28 - 276 6.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 398
AccII CGCG 1 cut(s) 203
AccIII TCCGGA 1 cut(s) 904
AciI CCGC 2 cut(s) 170, 363
AclWI GGATC 1 cut(s) 801
AcsI RAATTY 3 cut(s) 59, 606, 1045
AcuI CTGAAG 2 cut(s) 876, 975
AfaI GTAC 2 cut(s) 428, 651
AfiI CCNNNNNNNGG 8 cut(s) 86, 231, 232, 515, 630, 790, 911, 1009
AgeI ACCGGT 1 cut(s) 1009
AgsI TTSAA 6 cut(s) 298, 463, 723, 802, 872, 1000
AluBI AGCT 8 cut(s) 45, 199, 258, 553, 823, 927, 945, 1067
AluI AGCT 8 cut(s) 45, 199, 258, 553, 823, 927, 945, 1067
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 2 cut(s) 16, 664
AlwI GGATC 1 cut(s) 801
AlwNI CAGNNNCTG 2 cut(s) 553, 818
Ama87I CYCGRG 2 cut(s) 86, 653
Aor13HI TCCGGA 1 cut(s) 904
AoxI GGCC 3 cut(s) 77, 707, 974
ApeKI GCWGC 2 cut(s) 616, 1064
ApoI RAATTY 3 cut(s) 59, 606, 1045
ArsI GACNNNNNNTTYG 2 cut(s) 196, 228
AsiGI ACCGGT 1 cut(s) 1009
Asp700I GAANNNNTTC 1 cut(s) 179
AspLEI GCGC 1 cut(s) 698
AspS9I GGNCC 3 cut(s) 77, 793, 974
AsuC2I CCSGG 1 cut(s) 741
AsuHPI GGTGA 2 cut(s) 175, 184
AsuII TTCGAA 1 cut(s) 56
AvaI CYCGRG 2 cut(s) 86, 653
AvaII GGWCC 1 cut(s) 793
AxyI CCTNAGG 1 cut(s) 704
BanII GRGCYC 1 cut(s) 201
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 1 cut(s) 628
BccI CCATC 4 cut(s) 160, 281, 320, 532
BceAI ACGGC 1 cut(s) 1041
BcgI CGANNNNNNTGC 2 cut(s) 634, 668
BcnI CCSGG 1 cut(s) 741
BcoDI GTCTC 2 cut(s) 16, 664
BfaI CTAG 1 cut(s) 1005
BfoI RGCGCY 1 cut(s) 699
BglII AGATCT 1 cut(s) 488
BisI GCNGC 3 cut(s) 364, 617, 1065
BlpI GCTNAGC 1 cut(s) 819
BlsI GCNGC 3 cut(s) 365, 618, 1066
Bme1390I CCNGG 1 cut(s) 741
Bme18I GGWCC 1 cut(s) 793
BmeT110I CYCGRG 2 cut(s) 86, 653
BmgT120I GGNCC 3 cut(s) 77, 793, 974
BmiI GGNNCC 2 cut(s) 794, 795
BmrFI CCNGG 1 cut(s) 741
BmsI GCATC 4 cut(s) 72, 534, 748, 1049
BpmI CTGGAG 1 cut(s) 967
Bpu10I CCTNAGC 1 cut(s) 367
Bpu1102I GCTNAGC 1 cut(s) 819
Bpu14I TTCGAA 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 741
BsaI GGTCTC 1 cut(s) 16
BsaJI CCNNGG 4 cut(s) 562, 677, 937, 1033
BsaWI WCCGGW 4 cut(s) 25, 850, 904, 1009
Bsc4I CCNNNNNNNGG 8 cut(s) 86, 231, 232, 515, 630, 790, 911, 1009
Bse118I RCCGGY 1 cut(s) 1009
Bse1I ACTGG 1 cut(s) 875
Bse21I CCTNAGG 1 cut(s) 704
BseAI TCCGGA 1 cut(s) 904
BseDI CCNNGG 4 cut(s) 562, 677, 937, 1033
BseGI GGATG 2 cut(s) 391, 663
BseLI CCNNNNNNNGG 8 cut(s) 86, 231, 232, 515, 630, 790, 911, 1009
BseMII CTCAG 3 cut(s) 381, 779, 810
BseNI ACTGG 1 cut(s) 875
BseXI GCAGC 1 cut(s) 628
Bsh1236I CGCG 1 cut(s) 203
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 3 cut(s) 79, 709, 976
BshTI ACCGGT 1 cut(s) 1009
BsiEI CGRYCG 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 201
BsiHKCI CYCGRG 2 cut(s) 86, 653
BsiSI CCGG 6 cut(s) 26, 467, 741, 851, 905, 1010
BslFI GGGAC 4 cut(s) 248, 296, 533, 806
BslI CCNNNNNNNGG 8 cut(s) 86, 231, 232, 515, 630, 790, 911, 1009
BsmAI GTCTC 2 cut(s) 16, 664
BsmFI GGGAC 4 cut(s) 248, 296, 533, 806
BsnI GGCC 3 cut(s) 79, 709, 976
Bso31I GGTCTC 1 cut(s) 16
BsoBI CYCGRG 2 cut(s) 86, 653
Bsp119I TTCGAA 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 201
Bsp13I TCCGGA 1 cut(s) 904
Bsp143I GATC 3 cut(s) 348, 488, 806
Bsp1720I GCTNAGC 1 cut(s) 819
Bsp19I CCATGG 1 cut(s) 677
Bsp68I TCGCGA 1 cut(s) 203
BspACI CCGC 2 cut(s) 170, 363
BspANI GGCC 3 cut(s) 79, 709, 976
BspCNI CTCAG 3 cut(s) 380, 780, 811
BspEI TCCGGA 1 cut(s) 904
BspFNI CGCG 1 cut(s) 203
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 2 cut(s) 794, 795
BspPI GGATC 1 cut(s) 801
BspQI GCTCTTC 1 cut(s) 35
BspT104I TTCGAA 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 16
BsrFI RCCGGY 1 cut(s) 1009
BsrI ACTGG 1 cut(s) 875
BssAI RCCGGY 1 cut(s) 1009
BssECI CCNNGG 4 cut(s) 562, 677, 937, 1033
BssMI GATC 3 cut(s) 348, 488, 806
BssNAI GTATAC 1 cut(s) 399
BssT1I CCWWGG 3 cut(s) 562, 677, 1033
Bst1107I GTATAC 1 cut(s) 399
Bst4CI ACNGT 4 cut(s) 124, 163, 595, 814
Bst6I CTCTTC 4 cut(s) 8, 14, 35, 951
BstAPI GCANNNNNTGC 1 cut(s) 1029
BstBI TTCGAA 1 cut(s) 56
BstC8I GCNNGC 2 cut(s) 201, 1030
BstDEI CTNAG 5 cut(s) 367, 704, 788, 819, 1068
BstDSI CCRYGG 1 cut(s) 677
BstF5I GGATG 2 cut(s) 391, 663
BstFNI CGCG 1 cut(s) 203
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 1 cut(s) 698
BstKTI GATC 3 cut(s) 351, 491, 809
BstMAI GTCTC 2 cut(s) 16, 664
BstMBI GATC 3 cut(s) 348, 488, 806
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 3 cut(s) 539, 829, 1029
BstSCI CCNGG 1 cut(s) 739
BstUI CGCG 1 cut(s) 203
BstV1I GCAGC 1 cut(s) 628
BstX2I RGATCY 2 cut(s) 488, 806
BstYI RGATCY 2 cut(s) 488, 806
BstZ17I GTATAC 1 cut(s) 399
Bsu36I CCTNAGG 1 cut(s) 704
BsuRI GGCC 3 cut(s) 79, 709, 976
BtgI CCRYGG 1 cut(s) 677
BtgZI GCGATG 1 cut(s) 557
BtsCI GGATG 2 cut(s) 391, 663
BtsIMutI CAGTG 1 cut(s) 900
BtuMI TCGCGA 1 cut(s) 203
Cac8I GCNNGC 2 cut(s) 201, 1030
CaiI CAGNNNCTG 2 cut(s) 553, 818
CciI TCATGA 1 cut(s) 433
CfoI GCGC 1 cut(s) 698
Cfr10I RCCGGY 1 cut(s) 1009
Cfr13I GGNCC 3 cut(s) 77, 793, 974
CseI GACGC 1 cut(s) 838
Csp6I GTAC 2 cut(s) 427, 650
CspAI ACCGGT 1 cut(s) 1009
CviAII CATG 2 cut(s) 434, 678
CviQI GTAC 2 cut(s) 427, 650
DdeI CTNAG 5 cut(s) 367, 704, 788, 819, 1068
DpnI GATC 3 cut(s) 350, 490, 808
DpnII GATC 3 cut(s) 348, 488, 806
Eam1104I CTCTTC 4 cut(s) 8, 14, 35, 951
EarI CTCTTC 4 cut(s) 8, 14, 35, 951
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 3 cut(s) 562, 677, 1033
Eco147I AGGCCT 1 cut(s) 709
Eco24I GRGCYC 1 cut(s) 201
Eco31I GGTCTC 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 793
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 2 cut(s) 876, 975
Eco81I CCTNAGG 1 cut(s) 704
Eco88I CYCGRG 2 cut(s) 86, 653
EcoICRI GAGCTC 1 cut(s) 199
EcoO109I RGGNCCY 1 cut(s) 793
EcoT14I CCWWGG 3 cut(s) 562, 677, 1033
EcoT38I GRGCYC 1 cut(s) 201
ErhI CCWWGG 3 cut(s) 562, 677, 1033
FaeI CATG 2 cut(s) 437, 681
FaiI YATR 9 cut(s) 261, 321, 399, 435, 447, 476, 679, 921, 932
FalI AAGNNNNNCTT 2 cut(s) 1012, 1044
FaqI GGGAC 4 cut(s) 248, 296, 533, 806
FatI CATG 2 cut(s) 433, 677
FblI GTMKAC 1 cut(s) 398
Fnu4HI GCNGC 3 cut(s) 364, 617, 1065
FokI GGATG 2 cut(s) 398, 670
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 3 cut(s) 364, 617, 1065
FspBI CTAG 1 cut(s) 1005
GlaI GCGC 1 cut(s) 697
GluI GCNGC 3 cut(s) 364, 617, 1065
GsuI CTGGAG 1 cut(s) 967
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 3 cut(s) 79, 709, 976
HapII CCGG 6 cut(s) 26, 467, 741, 851, 905, 1010
HgaI GACGC 1 cut(s) 838
HhaI GCGC 1 cut(s) 698
Hin1II CATG 2 cut(s) 437, 681
Hin6I GCGC 1 cut(s) 696
HinP1I GCGC 1 cut(s) 696
HincII GTYRAC 1 cut(s) 663
HindII GTYRAC 1 cut(s) 663
HindIII AAGCTT 1 cut(s) 925
HinfI GANTC 5 cut(s) 99, 380, 409, 494, 598
HpaI GTTAAC 1 cut(s) 663
HpaII CCGG 6 cut(s) 26, 467, 741, 851, 905, 1010
HphI GGTGA 2 cut(s) 175, 184
Hpy166II GTNNAC 2 cut(s) 399, 663
Hpy8I GTNNAC 2 cut(s) 399, 663
Hpy99I CGWCG 2 cut(s) 163, 208
HpyAV CCTTC 3 cut(s) 190, 630, 682
HpyCH4III ACNGT 4 cut(s) 124, 163, 595, 814
HpyCH4V TGCA 4 cut(s) 451, 547, 645, 1064
HpyF10VI GCNNNNNNNGC 3 cut(s) 539, 829, 1029
HpyF3I CTNAG 5 cut(s) 367, 704, 788, 819, 1068
Hsp92II CATG 2 cut(s) 437, 681
HspAI GCGC 1 cut(s) 696
KflI GGGWCCC 1 cut(s) 793
Kpn2I TCCGGA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 663
Kzo9I GATC 3 cut(s) 348, 488, 806
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 2 cut(s) 613, 907
Lsp1109I GCAGC 1 cut(s) 628
LweI GCATC 4 cut(s) 72, 534, 748, 1049
MaeI CTAG 1 cut(s) 1005
MaeIII GTNAC 4 cut(s) 290, 555, 595, 841
MalI GATC 3 cut(s) 350, 490, 808
MboI GATC 3 cut(s) 348, 488, 806
MboII GAAGA 5 cut(s) 25, 31, 52, 767, 968
MfeI CAATTG 1 cut(s) 336
MflI RGATCY 2 cut(s) 488, 806
MhlI GDGCHC 1 cut(s) 201
MluCI AATT 6 cut(s) 59, 336, 513, 606, 978, 1045
MlyI GAGTC 1 cut(s) 592
MmeI TCCRAC 1 cut(s) 841
MroI TCCGGA 1 cut(s) 904
MroXI GAANNNNTTC 1 cut(s) 179
MseI TTAA 1 cut(s) 662
MslI CAYNNNNRTG 1 cut(s) 572
MspI CCGG 6 cut(s) 26, 467, 741, 851, 905, 1010
MspR9I CCNGG 1 cut(s) 741
MunI CAATTG 1 cut(s) 336
MvnI CGCG 1 cut(s) 203
MwoI GCNNNNNNNGC 3 cut(s) 539, 829, 1029
NciI CCSGG 1 cut(s) 741
NcoI CCATGG 1 cut(s) 677
NdeII GATC 3 cut(s) 348, 488, 806
NlaIII CATG 2 cut(s) 437, 681
NlaIV GGNNCC 2 cut(s) 794, 795
NmuCI GTSAC 3 cut(s) 555, 595, 841
NruI TCGCGA 1 cut(s) 203
NspV TTCGAA 1 cut(s) 56
PagI TCATGA 1 cut(s) 433
PceI AGGCCT 1 cut(s) 709
PciSI GCTCTTC 1 cut(s) 35
PcsI WCGNNNNNNNCGW 1 cut(s) 212
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 4 cut(s) 99, 380, 409, 494
PinAI ACCGGT 1 cut(s) 1009
PkrI GCNGC 3 cut(s) 365, 618, 1066
PleI GAGTC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 592
PpuMI RGGWCCY 1 cut(s) 793
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 793
PspN4I GGNNCC 2 cut(s) 794, 795
PspPI GGNCC 3 cut(s) 77, 793, 974
PspPPI RGGWCCY 1 cut(s) 793
PstNI CAGNNNCTG 2 cut(s) 553, 818
PsuI RGATCY 2 cut(s) 488, 806
RruI TCGCGA 1 cut(s) 203
RsaI GTAC 2 cut(s) 428, 651
RsaNI GTAC 2 cut(s) 427, 650
RseI CAYNNNNRTG 1 cut(s) 572
SacI GAGCTC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 1 cut(s) 662
SatI GCNGC 3 cut(s) 364, 617, 1065
Sau3AI GATC 3 cut(s) 348, 488, 806
Sau96I GGNCC 3 cut(s) 77, 793, 974
SchI GAGTC 1 cut(s) 592
ScrFI CCNGG 1 cut(s) 741
SduI GDGCHC 1 cut(s) 201
SfaNI GCATC 4 cut(s) 72, 534, 748, 1049
SfuI TTCGAA 1 cut(s) 56
SinI GGWCC 1 cut(s) 793
SmiMI CAYNNNNRTG 1 cut(s) 572
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
Sse9I AATT 6 cut(s) 59, 336, 513, 606, 978, 1045
SseBI AGGCCT 1 cut(s) 709
SsiI CCGC 2 cut(s) 170, 363
SspMI CTAG 1 cut(s) 1005
SstI GAGCTC 1 cut(s) 201
StuI AGGCCT 1 cut(s) 709
StyD4I CCNGG 1 cut(s) 739
StyI CCWWGG 3 cut(s) 562, 677, 1033
TaaI ACNGT 4 cut(s) 124, 163, 595, 814
TaqI TCGA 6 cut(s) 8, 56, 63, 73, 191, 351
TasI AATT 6 cut(s) 59, 336, 513, 606, 978, 1045
TatI WGTACW 2 cut(s) 426, 649
TauI GCSGC 1 cut(s) 366
TfiI GAWTC 4 cut(s) 99, 380, 409, 494
Tru1I TTAA 1 cut(s) 662
Tru9I TTAA 1 cut(s) 662
TscAI CASTG 1 cut(s) 900
TseFI GTSAC 3 cut(s) 555, 595, 841
TseI GCWGC 2 cut(s) 616, 1064
Tsp45I GTSAC 3 cut(s) 555, 595, 841
TspDTI ATGAA 3 cut(s) 26, 422, 450
TspGWI ACGGA 2 cut(s) 41, 221
TspRI CASTG 1 cut(s) 900
VpaK11BI GGWCC 1 cut(s) 793
XapI RAATTY 3 cut(s) 59, 606, 1045
XmiI GTMKAC 1 cut(s) 398
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.