Prupe.1G166200_v2.0.a1

Xyloglucan galactosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
13495894 .. 13497978
2085 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G166200.1

Sequence Viewer

Length: 1470 bp
ATGGGGAAACCACCGCCCGGAAAGTGCTTTCAAGAACTCTGGTTTGGCCTACTAGTGTCTTTTCTTTTGTGCCTTGTATTGCTTTGCTTGAACTATTCAACTTCATCGGGTGCCAACAATGGGATCGATCTTTCGATGAGCAAACAAGTTCGTCCAATTGGTGATATGAAGATTAACGACACCGAAGATTCATGCTCCGATCGCTACATTTATATCCATGATGATCTTCCTTCCAAATTCAACAGTGACTTCCTCATCAACTGCAAGTCTATTTCTGCAGGGATTAGTAGTAGCAGCATACCAAGTATGTGTCCTGACCTTTTGAATTTGGGTCTTGGTCCTCAAATTGAAAACTCTGACGGGGTTTTAGCCAACGAGAGTTGGTTTGTCACAAATCCTTACTTGTTAGAAGTCATATTCCACAACAAGATGAAGAAGTATGAGTGTTTGACAAGCAACTCCACTCTGGCTTCTGCCATTTATGTGCCATTCTACACTGGCATGGATGCCAGTGTTCATTTGTGGGATTCTAACCTCACTATCAGAGACTCTTCAGCTAAGAATTTGGTCAAGTGGCTTTCAGGGCAACCCGAATGGAAGAAAATGTGGGGCAGAGACCATTTCTTTGTTTCTGGGAGGACTTCTTGGGATTTTAGGAGGGTAAGAGACAATAGTTCTGAGTGGGGTAGTAAACTCAGGTTCTTGCCAGAGTCCATGAACATGACTATGTTATCAATGGAAGGAAGCCTTTGGAAAAATGACATTGCTATACCATACCCCACAAGCTTTCATCCTGCAAAGGACATTGAGGTGGTTCAATGGCAGAACAGAGTGAGGCAACAAGAAAGGCCTTACTTGTTTGCTTTTGTTGGTGCACCAAGGCCTCACCTGCAAGGTTCCATCCGGGGCAAAATTATTGATCATTGCCAAGCATCAACTACTTGCAAGTTTTTGCATTGCGGTGAAAACAATTGTCACAACCCGGTTAATATTATTAGGGTGTTTCAGAGCTCAGTCTATTGCCTGCAGCCTCGAGGGGATTCAGACACTAGGAGGTCAGCTTTCGACGCTATTCTGGCTGGTTGTATTCCAGTCTTTTTTCATCCCGCCACCGCGTTTTCTCAATATTTGTGGTATTTACCAAAGAATCATACCAAGTATTCCGTGTTTATTCCGGTGAGGGATGTAAAAGATTTGAAAGAAGAAGGCATCATTGAGAAAGTCTTGCAGGGAATTTCAAAGGATAGGGAATTGGCCATGAGAGAGGAGGTTATAAGGATAATAGCAAAGCTGGTATATGCAGATCCCGGGTCAAGATTAGACACTCCAGATGCATTTGATATAGCTGTGCAGGGAATTCTTGAGAGAATAGAGAATGTTAGAAAGGTGATTAGAGAGGGGAGGGATCCTAGTATTGGTTTTGCAGAGGTTGATGGTACAAAGTTCACATTTCCTGATACAATTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

490

Amino Acids

55.43

Weight (kDa)

6.61

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1274
AarI CACCTGC 1 cut(s) 897
AbsI CCTCGAGG 1 cut(s) 1032
Acc36I ACCTGC 1 cut(s) 897
AccB1I GGYRCC 1 cut(s) 110
AccII CGCG 1 cut(s) 1115
AciI CCGC 4 cut(s) 14, 960, 1107, 1113
AclWI GGATC 4 cut(s) 131, 1298, 1400, 1413
AcoI YGGCCR 1 cut(s) 1254
AcsI RAATTY 5 cut(s) 236, 325, 562, 1233, 1356
AcuI CTGAAG 1 cut(s) 537
AfaI GTAC 1 cut(s) 1438
AfiI CCNNNNNNNGG 3 cut(s) 17, 120, 1415
AgsI TTSAA 9 cut(s) 32, 91, 99, 241, 325, 350, 818, 1198, 1239
AhlI ACTAGT 1 cut(s) 52
AjuI GAANNNNNNNTTGG 2 cut(s) 27, 59
AluBI AGCT 6 cut(s) 557, 786, 1011, 1061, 1291, 1346
AluI AGCT 6 cut(s) 557, 786, 1011, 1061, 1291, 1346
Alw21I GWGCWC 2 cut(s) 877, 1013
Alw26I GTCTC 3 cut(s) 540, 609, 660
Alw44I GTGCAC 1 cut(s) 873
AlwI GGATC 4 cut(s) 131, 1298, 1400, 1413
Ama87I CYCGRG 2 cut(s) 1032, 1307
AoxI GGCC 4 cut(s) 46, 848, 881, 1254
ApaLI GTGCAC 1 cut(s) 873
ApeKI GCWGC 2 cut(s) 294, 1027
ApoI RAATTY 5 cut(s) 236, 325, 562, 1233, 1356
ArsI GACNNNNNNTTYG 2 cut(s) 608, 640
AspS9I GGNCC 1 cut(s) 338
AsuC2I CCSGG 5 cut(s) 18, 905, 983, 1308, 1309
AsuHPI GGTGA 5 cut(s) 173, 878, 974, 1189, 1399
AvaI CYCGRG 2 cut(s) 1032, 1307
AvaII GGWCC 1 cut(s) 338
BaeGI GKGCMC 1 cut(s) 877
BalI TGGCCA 1 cut(s) 1256
BamHI GGATCC 1 cut(s) 1405
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 1013
Bbv12I GWGCWC 2 cut(s) 877, 1013
BbvI GCAGC 2 cut(s) 306, 1039
BccI CCATC 2 cut(s) 908, 1427
BclI TGATCA 1 cut(s) 919
BcnI CCSGG 5 cut(s) 18, 905, 983, 1308, 1309
BcoDI GTCTC 3 cut(s) 540, 609, 660
BcuI ACTAGT 1 cut(s) 52
BfaI CTAG 3 cut(s) 53, 1050, 1410
BfmI CTRYAG 2 cut(s) 276, 1025
BfuAI ACCTGC 1 cut(s) 897
BisI GCNGC 2 cut(s) 295, 1028
BlsI GCNGC 2 cut(s) 296, 1029
Bme1390I CCNGG 5 cut(s) 18, 905, 983, 1308, 1309
Bme18I GGWCC 1 cut(s) 338
BmeT110I CYCGRG 2 cut(s) 1032, 1307
BmgT120I GGNCC 1 cut(s) 338
BmiI GGNNCC 3 cut(s) 112, 898, 1407
BmrFI CCNGG 5 cut(s) 18, 905, 983, 1308, 1309
BmsI GCATC 4 cut(s) 496, 941, 1218, 1321
BpmI CTGGAG 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 1382
BpuMI CCSGG 5 cut(s) 18, 905, 983, 1308, 1309
Bsa29I ATCGAT 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 609
BsaJI CCNNGG 3 cut(s) 878, 904, 1307
BsaWI WCCGGW 1 cut(s) 1174
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 120, 1415
Bse1I ACTGG 3 cut(s) 502, 510, 1091
Bse3DI GCAATG 3 cut(s) 762, 922, 955
BseCI ATCGAT 1 cut(s) 126
BseDI CCNNGG 3 cut(s) 878, 904, 1307
BseGI GGATG 5 cut(s) 511, 790, 900, 1102, 1189
BseLI CCNNNNNNNGG 3 cut(s) 17, 120, 1415
BseMI GCAATG 3 cut(s) 762, 922, 955
BseMII CTCAG 3 cut(s) 669, 709, 1026
BseNI ACTGG 3 cut(s) 502, 510, 1091
BseRI GAGGAG 1 cut(s) 1280
BseSI GKGCMC 1 cut(s) 877
BseXI GCAGC 2 cut(s) 306, 1039
BsgI GTGCAG 1 cut(s) 1370
Bsh1236I CGCG 1 cut(s) 1115
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 4 cut(s) 48, 850, 883, 1256
BshNI GGYRCC 1 cut(s) 110
BshVI ATCGAT 1 cut(s) 126
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 2 cut(s) 877, 1013
BsiHKCI CYCGRG 2 cut(s) 1032, 1307
BsiSI CCGG 5 cut(s) 18, 904, 983, 1175, 1308
BslI CCNNNNNNNGG 3 cut(s) 17, 120, 1415
BsmAI GTCTC 3 cut(s) 540, 609, 660
BsnI GGCC 4 cut(s) 48, 850, 883, 1256
Bso31I GGTCTC 1 cut(s) 609
BsoBI CYCGRG 2 cut(s) 1032, 1307
Bsp1286I GDGCHC 2 cut(s) 877, 1013
Bsp143I GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
BspACI CCGC 4 cut(s) 14, 960, 1107, 1113
BspANI GGCC 4 cut(s) 48, 850, 883, 1256
BspCNI CTCAG 3 cut(s) 670, 708, 1025
BspDI ATCGAT 1 cut(s) 126
BspFNI CGCG 1 cut(s) 1115
BspLI GGNNCC 3 cut(s) 112, 898, 1407
BspMAI CTGCAG 2 cut(s) 280, 1029
BspMI ACCTGC 1 cut(s) 897
BspPI GGATC 4 cut(s) 131, 1298, 1400, 1413
BspT107I GGYRCC 1 cut(s) 110
BspTNI GGTCTC 1 cut(s) 609
BsrDI GCAATG 3 cut(s) 762, 922, 955
BsrI ACTGG 3 cut(s) 502, 510, 1091
BssECI CCNNGG 3 cut(s) 878, 904, 1307
BssMI GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
BssT1I CCWWGG 1 cut(s) 878
Bst4CI ACNGT 1 cut(s) 245
Bst6I CTCTTC 1 cut(s) 556
BstC8I GCNNGC 1 cut(s) 1025
BstDEI CTNAG 4 cut(s) 558, 678, 695, 1012
BstF5I GGATG 5 cut(s) 511, 790, 900, 1102, 1189
BstFNI CGCG 1 cut(s) 1115
BstKTI GATC 7 cut(s) 126, 130, 202, 226, 922, 1306, 1408
BstMAI GTCTC 3 cut(s) 540, 609, 660
BstMBI GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 5 cut(s) 201, 583, 889, 1067, 1076
BstSCI CCNGG 5 cut(s) 16, 903, 981, 1306, 1307
BstSFI CTRYAG 2 cut(s) 276, 1025
BstSLI GKGCMC 1 cut(s) 877
BstUI CGCG 1 cut(s) 1115
BstV1I GCAGC 2 cut(s) 306, 1039
BstX2I RGATCY 2 cut(s) 1303, 1405
BstYI RGATCY 2 cut(s) 1303, 1405
Bsu15I ATCGAT 1 cut(s) 126
BsuRI GGCC 4 cut(s) 48, 850, 883, 1256
BsuTUI ATCGAT 1 cut(s) 126
BtsCI GGATG 5 cut(s) 511, 790, 900, 1102, 1189
BtsIMutI CAGTG 3 cut(s) 250, 495, 517
BveI ACCTGC 1 cut(s) 897
Cac8I GCNNGC 1 cut(s) 1025
Cfr13I GGNCC 1 cut(s) 338
Cfr9I CCCGGG 1 cut(s) 1307
ClaI ATCGAT 1 cut(s) 126
CseI GACGC 1 cut(s) 1076
Csp6I GTAC 1 cut(s) 1437
CspCI CAANNNNNGTGG 2 cut(s) 1112, 1147
CviAII CATG 6 cut(s) 192, 218, 502, 715, 721, 1258
CviQI GTAC 1 cut(s) 1437
DdeI CTNAG 4 cut(s) 558, 678, 695, 1012
DpnI GATC 7 cut(s) 125, 129, 201, 225, 921, 1305, 1407
DpnII GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
EaeI YGGCCR 1 cut(s) 1254
Eam1104I CTCTTC 1 cut(s) 556
EarI CTCTTC 1 cut(s) 556
Ecl136II GAGCTC 1 cut(s) 1011
Eco130I CCWWGG 1 cut(s) 878
Eco147I AGGCCT 2 cut(s) 850, 883
Eco24I GRGCYC 1 cut(s) 1013
Eco31I GGTCTC 1 cut(s) 609
Eco47I GGWCC 1 cut(s) 338
Eco53kI GAGCTC 1 cut(s) 1011
Eco57I CTGAAG 1 cut(s) 537
Eco88I CYCGRG 2 cut(s) 1032, 1307
EcoICRI GAGCTC 1 cut(s) 1011
EcoRI GAATTC 1 cut(s) 1356
EcoT14I CCWWGG 1 cut(s) 878
EcoT22I ATGCAT 1 cut(s) 1336
EcoT38I GRGCYC 1 cut(s) 1013
ErhI CCWWGG 1 cut(s) 878
FaeI CATG 6 cut(s) 195, 221, 505, 718, 724, 1261
FalI AAGNNNNNCTT 2 cut(s) 732, 764
FatI CATG 6 cut(s) 191, 217, 501, 714, 720, 1257
FauI CCCGC 1 cut(s) 1114
FbaI TGATCA 1 cut(s) 919
Fnu4HI GCNGC 2 cut(s) 295, 1028
FokI GGATG 5 cut(s) 518, 777, 887, 1089, 1196
FriOI GRGCYC 1 cut(s) 1013
Fsp4HI GCNGC 2 cut(s) 295, 1028
FspBI CTAG 3 cut(s) 53, 1050, 1410
GluI GCNGC 2 cut(s) 295, 1028
GsuI CTGGAG 1 cut(s) 1311
HaeIII GGCC 4 cut(s) 48, 850, 883, 1256
HapII CCGG 5 cut(s) 18, 904, 983, 1175, 1308
HgaI GACGC 1 cut(s) 1076
Hin1II CATG 6 cut(s) 195, 221, 505, 718, 724, 1261
HindIII AAGCTT 1 cut(s) 784
HinfI GANTC 6 cut(s) 188, 527, 548, 710, 1040, 1147
HpaII CCGG 5 cut(s) 18, 904, 983, 1175, 1308
HphI GGTGA 5 cut(s) 173, 878, 974, 1189, 1399
Hpy166II GTNNAC 3 cut(s) 692, 875, 1446
Hpy188I TCNGA 6 cut(s) 199, 358, 545, 679, 1008, 1045
Hpy188III TCNNGA 6 cut(s) 32, 314, 1314, 1328, 1361, 1454
Hpy8I GTNNAC 3 cut(s) 692, 875, 1446
Hpy99I CGWCG 1 cut(s) 1070
HpyAV CCTTC 3 cut(s) 240, 734, 1199
HpyCH4III ACNGT 1 cut(s) 245
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 583, 889, 1067, 1076
HpyF3I CTNAG 4 cut(s) 558, 678, 695, 1012
Hsp92II CATG 6 cut(s) 195, 221, 505, 718, 724, 1261
Ksp22I TGATCA 1 cut(s) 919
Kzo9I GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
LmnI GCTCC 1 cut(s) 200
Lsp1109I GCAGC 2 cut(s) 306, 1039
LweI GCATC 4 cut(s) 496, 941, 1218, 1321
MaeI CTAG 3 cut(s) 53, 1050, 1410
MaeIII GTNAC 3 cut(s) 245, 388, 974
MalI GATC 7 cut(s) 125, 129, 201, 225, 921, 1305, 1407
MboI GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
MboII GAAGA 7 cut(s) 181, 197, 218, 445, 543, 610, 1214
MfeI CAATTG 3 cut(s) 156, 970, 1461
MflI RGATCY 2 cut(s) 1303, 1405
MhlI GDGCHC 2 cut(s) 877, 1013
MlsI TGGCCA 1 cut(s) 1256
MluNI TGGCCA 1 cut(s) 1256
MlyI GAGTC 2 cut(s) 542, 719
Mox20I TGGCCA 1 cut(s) 1256
Mph1103I ATGCAT 1 cut(s) 1336
MscI TGGCCA 1 cut(s) 1256
MseI TTAA 2 cut(s) 174, 987
MslI CAYNNNNRTG 6 cut(s) 482, 500, 719, 725, 809, 960
Msp20I TGGCCA 1 cut(s) 1256
MspI CCGG 5 cut(s) 18, 904, 983, 1175, 1308
MspR9I CCNGG 5 cut(s) 18, 905, 983, 1308, 1309
MunI CAATTG 3 cut(s) 156, 970, 1461
MvnI CGCG 1 cut(s) 1115
MwoI GCNNNNNNNGC 5 cut(s) 201, 583, 889, 1067, 1076
NciI CCSGG 5 cut(s) 18, 905, 983, 1308, 1309
NdeII GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
NlaIII CATG 6 cut(s) 195, 221, 505, 718, 724, 1261
NlaIV GGNNCC 3 cut(s) 112, 898, 1407
NmuCI GTSAC 3 cut(s) 245, 388, 974
NsiI ATGCAT 1 cut(s) 1336
PaeR7I CTCGAG 1 cut(s) 1032
PaqCI CACCTGC 1 cut(s) 897
PceI AGGCCT 2 cut(s) 850, 883
PfeI GAWTC 4 cut(s) 188, 527, 1040, 1147
PkrI GCNGC 2 cut(s) 296, 1029
Ple19I CGATCG 1 cut(s) 202
PleI GAGTC 2 cut(s) 542, 718
PpsI GAGTC 2 cut(s) 542, 718
PsiI TTATAA 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 1013
PspN4I GGNNCC 3 cut(s) 112, 898, 1407
PspPI GGNCC 1 cut(s) 338
PspXI VCTCGAGB 1 cut(s) 1032
PstI CTGCAG 2 cut(s) 280, 1029
PsuI RGATCY 2 cut(s) 1303, 1405
PvuI CGATCG 1 cut(s) 202
RsaI GTAC 1 cut(s) 1438
RsaNI GTAC 1 cut(s) 1437
RseI CAYNNNNRTG 6 cut(s) 482, 500, 719, 725, 809, 960
SacI GAGCTC 1 cut(s) 1013
SaqAI TTAA 2 cut(s) 174, 987
SatI GCNGC 2 cut(s) 295, 1028
Sau3AI GATC 7 cut(s) 123, 127, 199, 223, 919, 1303, 1405
Sau96I GGNCC 1 cut(s) 338
SchI GAGTC 2 cut(s) 542, 719
ScrFI CCNGG 5 cut(s) 18, 905, 983, 1308, 1309
SduI GDGCHC 2 cut(s) 877, 1013
SfaNI GCATC 4 cut(s) 496, 941, 1218, 1321
SfcI CTRYAG 2 cut(s) 276, 1025
Sfr274I CTCGAG 1 cut(s) 1032
SinI GGWCC 1 cut(s) 338
SlaI CTCGAG 1 cut(s) 1032
SmaI CCCGGG 1 cut(s) 1309
SmiMI CAYNNNNRTG 6 cut(s) 482, 500, 719, 725, 809, 960
SmlI CTYRAG 2 cut(s) 1032, 1361
SmoI CTYRAG 2 cut(s) 1032, 1361
SpeI ACTAGT 1 cut(s) 52
SseBI AGGCCT 2 cut(s) 850, 883
SsiI CCGC 4 cut(s) 14, 960, 1107, 1113
SspI AATATT 2 cut(s) 991, 1127
SspMI CTAG 3 cut(s) 53, 1050, 1410
SstI GAGCTC 1 cut(s) 1013
StuI AGGCCT 2 cut(s) 850, 883
StyD4I CCNGG 5 cut(s) 16, 903, 981, 1306, 1307
StyI CCWWGG 1 cut(s) 878
TaaI ACNGT 1 cut(s) 245
TaqI TCGA 4 cut(s) 126, 134, 1033, 1065
TfiI GAWTC 4 cut(s) 188, 527, 1040, 1147
Tru1I TTAA 2 cut(s) 174, 987
Tru9I TTAA 2 cut(s) 174, 987
TscAI CASTG 3 cut(s) 250, 502, 517
TseFI GTSAC 3 cut(s) 245, 388, 974
TseI GCWGC 2 cut(s) 294, 1027
Tsp45I GTSAC 3 cut(s) 245, 388, 974
TspDTI ATGAA 8 cut(s) 93, 180, 182, 446, 506, 731, 779, 1091
TspGWI ACGGA 1 cut(s) 1153
TspMI CCCGGG 1 cut(s) 1307
TspRI CASTG 3 cut(s) 250, 502, 517
VneI GTGCAC 1 cut(s) 873
VpaK11BI GGWCC 1 cut(s) 338
XapI RAATTY 5 cut(s) 236, 325, 562, 1233, 1356
XhoI CTCGAG 1 cut(s) 1032
XmaI CCCGGG 1 cut(s) 1307
XspI CTAG 3 cut(s) 53, 1050, 1410
Zsp2I ATGCAT 1 cut(s) 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.