Prupe.1G166300_v2.0.a1

Xyloglucan galactosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
13499737 .. 13502456
2720 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G166300.1

Sequence Viewer

Length: 1461 bp
ATGGAGAAACCAGTTGCCGGAAAGTGCCACAAAGAAGTCTGGTTTGGCATACTAGTCTCCTTTGTTTTGTGCTTTACCATTCTTTGCTTTGATTATTCAACTTCAATGTTGGGCGTCTACAATGGGGTCAATCTCTTAGTCAGACGTGTTCATCCATACATCACCAGAGATTCGTGTTACGGACGTTACATTTATGTTCATGATGATCTTCCTGCCAAATTCAACGATGATCTCCTCAAAAACTGCCAGAATCTTACTACAGGGAGCAAGCCTAAGAATAGTGACACACAAAATATGTGTCGTTACATCGTGAATTTGGGGCTTGGTCCTGAGATTGAGGAACCAGAAGGGGTTTTAGCCAACGAGAGTTGGTTCATCACAAATCCTTACTTGTTGGAAGTCATATTCCACAACAAGATGAAGCAGTACAAGTGTTTGACAAACAACTCCAATCAGGCTTCAGCCATTTATGTACCATCCTATGTTGGCCTTGATGCCAGCCTCCATCTGTGGGATTTTAACCTCACGGTCAGAGACTATTCAGGGAAAGATCTCGTGGGATGGCTTTCGGGCAAGCCCGAATGGAAGAAAATGTGGGGGAGAGATCATTTCATGGTTGCTGGGAGGACTTCTTGGGACTTCAGGAGGCAAAAGGAGAATAGTTCTGATTGGGGTACTAATCTCAGGGTTTTGCCAGAGTCCATGAACATGAGTATGTTATCTGTTGAAGGAAGCCTTTGGAAAAATGACTTCGCCATACCATACCCTACAAATTTCCATCCTGCAAATGACAGTGATGTGGTTCAATGGCAGAACAGAGTCAGAAGCCAAAAGAGGCCTTTCCTGTTCACTTTTGTTGGTGCGCCGAGGCCTGACATGAAAGATTCAATCCGGGGCAAGCTTATTGATCAGTGCCAAGCTTCAAGCAACTGCAAGTTCTTACATTGTGGTTCTTCTGGGATTAATTGTAACAACCCGGTTACTGTTATGAGGGTGTTTGAGAGCTCTGTTTTTTGCTTGCAGCCTCCAGGGGATTCACACACTAGAAGATCAACTTTCGACTCGTTTCTGGCAGGCTGCATTCCGGTTTTCTTTCATCCTGCGACTGCGTATACGCAGTATTTGTGGCATTTACCGGAGAATCATACCAAGTATTCGGTCTTTATTCCGGTGAAAGAAGTTGAAGATTTGAAAGAAGGCATCATTGAGAAAACTTTGCTTGGAATTTCAAAGCATGAGGAATTGGCCATGAGAGAGGAGGTTATAAGGCTAATACCAAATCTGGTATATGCAGATCCCAGGTCAAGATTAGAGACCGAAGACGCATTCGATTTAGCTGTACAGGGAATTCTTGGGAGGATAGAGAATGTTAGGGAGGTTATTAGAGAGAGGAAGGATCCTAGTATTGGTTTTGGAGATGAGGATAATTTTAAGTTTACATTTCCTGAGACACCAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

487

Amino Acids

55.79

Weight (kDa)

6.25

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1265
AccI GTMKAC 2 cut(s) 117, 1112
AclWI GGATC 3 cut(s) 1289, 1391, 1404
AcoI YGGCCR 1 cut(s) 1245
AcsI RAATTY 5 cut(s) 218, 313, 772, 1224, 1347
AcuI CTGAAG 2 cut(s) 444, 625
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 4 cut(s) 428, 474, 676, 1341
AfiI CCNNNNNNNGG 3 cut(s) 17, 511, 1406
AflIII ACRYGT 1 cut(s) 145
AhlI ACTAGT 1 cut(s) 52
AjiI CACGTC 1 cut(s) 146
AjnI CCWGG 2 cut(s) 1027, 1298
AjuI GAANNNNNNNTTGG 2 cut(s) 27, 59
AluBI AGCT 4 cut(s) 901, 920, 1005, 1337
AluI AGCT 4 cut(s) 901, 920, 1005, 1337
Alw21I GWGCWC 1 cut(s) 1007
Alw26I GTCTC 4 cut(s) 61, 528, 1307, 1442
AlwI GGATC 3 cut(s) 1289, 1391, 1404
AoxI GGCC 4 cut(s) 487, 836, 869, 1245
ApeKI GCWGC 2 cut(s) 1021, 1077
ApoI RAATTY 5 cut(s) 218, 313, 772, 1224, 1347
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
AseI ATTAAT 1 cut(s) 963
AspLEI GCGC 1 cut(s) 865
AspS9I GGNCC 1 cut(s) 326
AsuC2I CCSGG 2 cut(s) 893, 977
AsuHPI GGTGA 2 cut(s) 154, 1183
AvaII GGWCC 1 cut(s) 326
BalI TGGCCA 1 cut(s) 1247
BamHI GGATCC 1 cut(s) 1396
BanII GRGCYC 1 cut(s) 1007
BauI CACGAG 1 cut(s) 554
BbsI GAAGAC 1 cut(s) 1326
Bbv12I GWGCWC 1 cut(s) 1007
BbvI GCAGC 2 cut(s) 1033, 1064
BccI CCATC 4 cut(s) 484, 513, 555, 786
BciT130I CCWGG 2 cut(s) 1029, 1300
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 2 cut(s) 893, 977
BcoDI GTCTC 4 cut(s) 61, 528, 1307, 1442
BcuI ACTAGT 1 cut(s) 52
BfaI CTAG 3 cut(s) 53, 1044, 1401
BfmI CTRYAG 1 cut(s) 258
BglII AGATCT 1 cut(s) 550
BisI GCNGC 2 cut(s) 1022, 1078
BlsI GCNGC 2 cut(s) 1023, 1079
Bme1390I CCNGG 4 cut(s) 893, 977, 1029, 1300
Bme18I GGWCC 1 cut(s) 326
BmgBI CACGTC 1 cut(s) 146
BmgT120I GGNCC 1 cut(s) 326
BmiI GGNNCC 2 cut(s) 342, 1398
BmrFI CCNGG 4 cut(s) 893, 977, 1029, 1300
BmsI GCATC 2 cut(s) 484, 1209
BpiI GAAGAC 1 cut(s) 1326
BpmI CTGGAG 1 cut(s) 1011
BpuMI CCSGG 2 cut(s) 893, 977
BsaHI GRCGYC 1 cut(s) 114
BsaI GGTCTC 1 cut(s) 1307
BsaJI CCNNGG 4 cut(s) 866, 892, 1028, 1298
BsaWI WCCGGW 3 cut(s) 1084, 1135, 1168
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 511, 1406
Bse1I ACTGG 1 cut(s) 11
BseBI CCWGG 2 cut(s) 1029, 1300
BseDI CCNNGG 4 cut(s) 866, 892, 1028, 1298
BseGI GGATG 5 cut(s) 151, 476, 566, 778, 1096
BseLI CCNNNNNNNGG 3 cut(s) 17, 511, 1406
BseMII CTCAG 3 cut(s) 321, 697, 1437
BseNI ACTGG 1 cut(s) 11
BseRI GAGGAG 2 cut(s) 224, 1271
BseXI GCAGC 2 cut(s) 1033, 1064
BseYI CCCAGC 1 cut(s) 620
BshFI GGCC 4 cut(s) 489, 838, 871, 1247
BsiHKAI GWGCWC 1 cut(s) 1007
BsiSI CCGG 6 cut(s) 18, 892, 977, 1085, 1136, 1169
BslFI GGGAC 1 cut(s) 650
BslI CCNNNNNNNGG 3 cut(s) 17, 511, 1406
BsmAI GTCTC 4 cut(s) 61, 528, 1307, 1442
BsmFI GGGAC 1 cut(s) 650
BsmI GAATGC 2 cut(s) 1080, 1325
BsnI GGCC 4 cut(s) 489, 838, 871, 1247
Bso31I GGTCTC 1 cut(s) 1307
Bsp1286I GDGCHC 1 cut(s) 1007
Bsp1407I TGTACA 1 cut(s) 1339
Bsp143I GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
BspANI GGCC 4 cut(s) 489, 838, 871, 1247
BspCNI CTCAG 3 cut(s) 322, 696, 1438
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 2 cut(s) 342, 1398
BspPI GGATC 3 cut(s) 1289, 1391, 1404
BspTNI GGTCTC 1 cut(s) 1307
BsrGI TGTACA 1 cut(s) 1339
BsrI ACTGG 1 cut(s) 11
BssECI CCNNGG 4 cut(s) 866, 892, 1028, 1298
BssMI GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
BssNAI GTATAC 1 cut(s) 1113
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 1 cut(s) 554
Bst1107I GTATAC 1 cut(s) 1113
Bst2BI CACGAG 1 cut(s) 554
Bst2UI CCWGG 2 cut(s) 1029, 1300
Bst4CI ACNGT 3 cut(s) 529, 794, 985
BstACI GRCGYC 1 cut(s) 114
BstAUI TGTACA 1 cut(s) 1339
BstC8I GCNNGC 6 cut(s) 269, 499, 575, 899, 1019, 1075
BstDEI CTNAG 5 cut(s) 136, 273, 330, 683, 1446
BstF5I GGATG 5 cut(s) 151, 476, 566, 778, 1096
BstHHI GCGC 1 cut(s) 865
BstKTI GATC 8 cut(s) 208, 232, 553, 607, 910, 1052, 1297, 1399
BstMAI GTCTC 4 cut(s) 61, 528, 1307, 1442
BstMBI GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
BstNI CCWGG 2 cut(s) 1029, 1300
BstSCI CCNGG 4 cut(s) 891, 975, 1027, 1298
BstSFI CTRYAG 1 cut(s) 258
BstV1I GCAGC 2 cut(s) 1033, 1064
BstV2I GAAGAC 1 cut(s) 1326
BstX2I RGATCY 3 cut(s) 550, 1294, 1396
BstYI RGATCY 3 cut(s) 550, 1294, 1396
BstZ17I GTATAC 1 cut(s) 1113
BsuRI GGCC 4 cut(s) 489, 838, 871, 1247
BtrI CACGTC 1 cut(s) 146
BtsCI GGATG 5 cut(s) 151, 476, 566, 778, 1096
BtsIMutI CAGTG 2 cut(s) 799, 917
Cac8I GCNNGC 6 cut(s) 269, 499, 575, 899, 1019, 1075
CciI TCATGA 1 cut(s) 199
CfoI GCGC 1 cut(s) 865
Cfr13I GGNCC 1 cut(s) 326
CseI GACGC 2 cut(s) 103, 1331
Csp6I GTAC 4 cut(s) 427, 473, 675, 1340
CviAII CATG 7 cut(s) 200, 613, 703, 709, 877, 1235, 1249
CviQI GTAC 4 cut(s) 427, 473, 675, 1340
DdeI CTNAG 5 cut(s) 136, 273, 330, 683, 1446
DpnI GATC 8 cut(s) 207, 231, 552, 606, 909, 1051, 1296, 1398
DpnII GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
EaeI YGGCCR 1 cut(s) 1245
Ecl136II GAGCTC 1 cut(s) 1005
Eco147I AGGCCT 2 cut(s) 838, 871
Eco24I GRGCYC 1 cut(s) 1007
Eco31I GGTCTC 1 cut(s) 1307
Eco47I GGWCC 1 cut(s) 326
Eco53kI GAGCTC 1 cut(s) 1005
Eco57I CTGAAG 2 cut(s) 444, 625
EcoICRI GAGCTC 1 cut(s) 1005
EcoRI GAATTC 1 cut(s) 1347
EcoRII CCWGG 2 cut(s) 1027, 1298
EcoT38I GRGCYC 1 cut(s) 1007
FaeI CATG 7 cut(s) 203, 616, 706, 712, 880, 1238, 1252
FalI AAGNNNNNCTT 4 cut(s) 720, 752, 1039, 1071
FaqI GGGAC 1 cut(s) 650
FatI CATG 7 cut(s) 199, 612, 702, 708, 876, 1234, 1248
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 2 cut(s) 117, 1112
Fnu4HI GCNGC 2 cut(s) 1022, 1078
FokI GGATG 5 cut(s) 138, 463, 573, 765, 1083
FriOI GRGCYC 1 cut(s) 1007
Fsp4HI GCNGC 2 cut(s) 1022, 1078
FspBI CTAG 3 cut(s) 53, 1044, 1401
GlaI GCGC 1 cut(s) 864
GluI GCNGC 2 cut(s) 1022, 1078
GsaI CCCAGC 1 cut(s) 624
GsuI CTGGAG 1 cut(s) 1011
HaeIII GGCC 4 cut(s) 489, 838, 871, 1247
HapII CCGG 6 cut(s) 18, 892, 977, 1085, 1136, 1169
HgaI GACGC 2 cut(s) 103, 1331
HhaI GCGC 1 cut(s) 865
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 7 cut(s) 203, 616, 706, 712, 880, 1238, 1252
Hin6I GCGC 1 cut(s) 863
HinP1I GCGC 1 cut(s) 863
HindIII AAGCTT 2 cut(s) 899, 918
HinfI GANTC 8 cut(s) 170, 250, 698, 819, 884, 1034, 1061, 1141
HpaII CCGG 6 cut(s) 18, 892, 977, 1085, 1136, 1169
HphI GGTGA 2 cut(s) 154, 1183
Hpy166II GTNNAC 4 cut(s) 118, 849, 1113, 1437
Hpy188I TCNGA 4 cut(s) 143, 533, 667, 824
Hpy188III TCNNGA 6 cut(s) 200, 310, 329, 643, 1305, 1445
Hpy8I GTNNAC 4 cut(s) 118, 849, 1113, 1437
HpyAV CCTTC 4 cut(s) 341, 722, 1190, 1387
HpyCH4III ACNGT 3 cut(s) 529, 794, 985
HpyCH4IV ACGT 2 cut(s) 145, 184
HpyCH4V TGCA 5 cut(s) 785, 933, 1021, 1080, 1292
HpyF3I CTNAG 5 cut(s) 136, 273, 330, 683, 1446
HpySE526I ACGT 2 cut(s) 145, 184
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 7 cut(s) 203, 616, 706, 712, 880, 1238, 1252
HspAI GCGC 1 cut(s) 863
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
LmnI GCTCC 1 cut(s) 264
Lsp1109I GCAGC 2 cut(s) 1033, 1064
LweI GCATC 2 cut(s) 484, 1209
MaeI CTAG 3 cut(s) 53, 1044, 1401
MaeII ACGT 2 cut(s) 145, 184
MaeIII GTNAC 6 cut(s) 176, 185, 281, 302, 968, 979
MalI GATC 8 cut(s) 207, 231, 552, 606, 909, 1051, 1296, 1398
MboI GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
MboII GAAGA 6 cut(s) 200, 598, 945, 1059, 1196, 1331
MflI RGATCY 3 cut(s) 550, 1294, 1396
MhlI GDGCHC 1 cut(s) 1007
MlsI TGGCCA 1 cut(s) 1247
MluCI AATT 8 cut(s) 218, 313, 772, 964, 1224, 1241, 1347, 1426
MluNI TGGCCA 1 cut(s) 1247
MlyI GAGTC 3 cut(s) 707, 828, 1055
MmeI TCCRAC 1 cut(s) 375
Mox20I TGGCCA 1 cut(s) 1247
MscI TGGCCA 1 cut(s) 1247
MseI TTAA 3 cut(s) 519, 963, 1431
MslI CAYNNNNRTG 2 cut(s) 707, 713
Msp20I TGGCCA 1 cut(s) 1247
MspI CCGG 6 cut(s) 18, 892, 977, 1085, 1136, 1169
MspR9I CCNGG 4 cut(s) 893, 977, 1029, 1300
Mva1269I GAATGC 2 cut(s) 1080, 1325
MvaI CCWGG 2 cut(s) 1029, 1300
NciI CCSGG 2 cut(s) 893, 977
NdeII GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
NlaIII CATG 7 cut(s) 203, 616, 706, 712, 880, 1238, 1252
NlaIV GGNNCC 2 cut(s) 342, 1398
NmeAIII GCCGAG 1 cut(s) 891
NmuCI GTSAC 1 cut(s) 281
PagI TCATGA 1 cut(s) 199
PceI AGGCCT 2 cut(s) 838, 871
PctI GAATGC 2 cut(s) 1080, 1325
PfeI GAWTC 5 cut(s) 170, 250, 884, 1034, 1141
PkrI GCNGC 2 cut(s) 1023, 1079
PleI GAGTC 3 cut(s) 706, 827, 1055
PpsI GAGTC 3 cut(s) 706, 827, 1055
PshBI ATTAAT 1 cut(s) 963
PsiI TTATAA 1 cut(s) 1265
Psp124BI GAGCTC 1 cut(s) 1007
Psp6I CCWGG 2 cut(s) 1027, 1298
PspFI CCCAGC 1 cut(s) 620
PspGI CCWGG 2 cut(s) 1027, 1298
PspN4I GGNNCC 2 cut(s) 342, 1398
PspPI GGNCC 1 cut(s) 326
PsuI RGATCY 3 cut(s) 550, 1294, 1396
RsaI GTAC 4 cut(s) 428, 474, 676, 1341
RsaNI GTAC 4 cut(s) 427, 473, 675, 1340
RseI CAYNNNNRTG 2 cut(s) 707, 713
SacI GAGCTC 1 cut(s) 1007
SaqAI TTAA 3 cut(s) 519, 963, 1431
SatI GCNGC 2 cut(s) 1022, 1078
Sau3AI GATC 8 cut(s) 205, 229, 550, 604, 907, 1049, 1294, 1396
Sau96I GGNCC 1 cut(s) 326
SchI GAGTC 3 cut(s) 707, 828, 1055
ScrFI CCNGG 4 cut(s) 893, 977, 1029, 1300
SduI GDGCHC 1 cut(s) 1007
SfaNI GCATC 2 cut(s) 484, 1209
SfcI CTRYAG 1 cut(s) 258
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 2 cut(s) 707, 713
SpeI ACTAGT 1 cut(s) 52
Sse9I AATT 8 cut(s) 218, 313, 772, 964, 1224, 1241, 1347, 1426
SseBI AGGCCT 2 cut(s) 838, 871
SspMI CTAG 3 cut(s) 53, 1044, 1401
SstI GAGCTC 1 cut(s) 1007
StuI AGGCCT 2 cut(s) 838, 871
StyD4I CCNGG 4 cut(s) 891, 975, 1027, 1298
TaaI ACNGT 3 cut(s) 529, 794, 985
TaiI ACGT 2 cut(s) 148, 187
TaqI TCGA 2 cut(s) 1059, 1329
TaqII GACCGA 2 cut(s) 1147, 1331
TasI AATT 8 cut(s) 218, 313, 772, 964, 1224, 1241, 1347, 1426
TatI WGTACW 2 cut(s) 426, 1339
TfiI GAWTC 5 cut(s) 170, 250, 884, 1034, 1141
Tru1I TTAA 3 cut(s) 519, 963, 1431
Tru9I TTAA 3 cut(s) 519, 963, 1431
TscAI CASTG 2 cut(s) 799, 917
TseFI GTSAC 1 cut(s) 281
TseI GCWGC 2 cut(s) 1021, 1077
Tsp45I GTSAC 1 cut(s) 281
TspDTI ATGAA 8 cut(s) 140, 188, 364, 434, 601, 719, 893, 1085
TspGWI ACGGA 1 cut(s) 195
TspRI CASTG 2 cut(s) 799, 917
VpaK11BI GGWCC 1 cut(s) 326
VspI ATTAAT 1 cut(s) 963
XapI RAATTY 5 cut(s) 218, 313, 772, 1224, 1347
XmiI GTMKAC 2 cut(s) 117, 1112
XspI CTAG 3 cut(s) 53, 1044, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.