Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000894

Physical Location & Seq

Genomic Coordinates Reverse (-)

36892022 .. 36897412

Gene Structure 5391 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00357300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGTGGGGCAGAGACCATTTCTTTGTTGTTGGGAGGATTTCATGGGATTTCAGAAGGAAAACAGACCACAATACTGATTGGGGTAGTAAATTCCGCTTCTTGCCAGAGTCCAAGAATATGACTATGTTGTCAATTGAAGGAAGCTCATGGACAAATGATATTGCTATACCATACCCTACAGGCTTTCACCCTGCAAAGGACAGTGAGGTGTTTATTCCGGTTAAGGATGCAACAGATTTGAATGAAGTCAGCATTGAGAAAACCTTGCTCGGAATCTCAAGGGCCAAGGAACTAGCAATGAGAGAGCAGGTTATACGGCTTATACCAAACCTGGTGTATTCAGATCCCATGTCAACATTGGAGACCCCGGATGCATTTGATATAGCGGTCAAAAGAATTCTCGAGAGGATTGAAAATGTTAGGAAGAGTGAAGCAAGGTTAAAGATGCCGGTGCGGCCAAATTTGCGTCGTGTCGATGGCTACAATCCAAAAACGGGGATCAGAATTTCCGGACTTGTGGTGGCAATGTTCAAGTCCTTCTGGTTTGAGAGAGCTGCTCATCCAGACCAAATGGAGAAACTACTTACCGGAAAGTGTTCTCGAGAAGTCTTGTTTGGCACACTCGTGTCCTTTTGTTTATGCTTTGCATTGCTTTGCCTGCACAATTCAACTTCATTGGGTTTCAGCAATTGGGTTAACATTCTGGGGAACAGTCATGTTCACCACTTATTTGATTCTTGCTCCGGTCGTTACATTTATGTCTATGATGATCTTCCTGCCAAATTCAACTATGACCTGCTCAGAAACTGTAAGTCACTTACCTCAGGGAGTACTAGTGATTCTGGTGACAAAAAAAATATGTGTCCTTACCTTGTGAATATGGGTCTTGGTCCTGAAATTGAGAGCTCTAAAGGTGTTTTAGCAAACAAGAGTTGGTTTACCACAAACCCCTACTTGTTAGAAGTCATATTCCACAACAGGATGAAGCAGTACGAGTGCTTGACAAACATCTCCACTCTGGCTTCAGCAATTTATGTACCATACTACACAGGCCTTGACGCCAGTCTCCATCTTTGGGATACTAACCTCACTGTCAGAGACTCTTCGGGTAAAGATCTAGTCAAGTGGCTTTCAGGGAAACCTGAATGGAAGACAATGTGGGGCAGAGACCATTTCATGGTGACTGGCAGGACTTCTTGGGATTTCAGGAGGACTAACAACAACGCGGAATGGCCATGGGGCAGTGGTCTCAGGTTCTTGCCAGAGTCAAAGAACATGAGTATGCTTTCGGTAGAAGGAAGCTTGTGGAAAAATGACTTTGCTATTCCATACCCCACGAACTTTCATCCAGCAAAGGATAGTGAGATTATCCAGTGGCAGAACAGAATGAGATATCTAGAGAGGCCTTACTTGTTTTCTTTTATTGGAGCGCCAAGGCCTGGCATGGAGAAATCTATCAGGGGGGAACTTATTGATCAGTGCCGAGCTTCAAGTGCTTGCAAGTTTGTAAATTGTGGTGCTGATGGGATCAACTGTAACAACCCGGTTACTGTTATGAAGGTGTTTCAAAGCTCAGTTTATTGCTTGCAGCCTCCAGGGGATTCACACACTAGGAGATCAGCTTTCGACTCTATGCTGGCTGGTTGTATTCCTGTTTTCTTCCATCCAGGTTCAGCTTATAACCAATATTTATGGCATTTACCAAAGAATCATAGCAGATATTCGGTGTTTATCCCCGCAAAGAATGTGACTGATTTGAAAGAAGTCTCTATTGAGAAACTTTTGCTTGGAATTTCAAAGGAGAAGCAATTAGCAATGAGAAAGAAGGTTATAAAGTTAATACCAAAGCTGGTATATGCAGATCCCAGGTCAAGACTGGGGACTGAAGACGCATTTGATTTTGCTGTTTTGGGAATTCTTGAGAGGATAGAGAATGTTAGGCAGTTGATTAGAGAGGGAAAAGATCCTAGTATTGGTTTTGCAGATGAAGATAGTTTAAAATACACATTTCCTGAGACACTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

675

Amino Acids

77.13

Weight (kDa)

8.84

Isoelectric Point (pI)

37.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	3 - 68	2.1e-10	Exostosin GT47 domain
Exostosin_GT47	PF03016	246 - 589	4.1e-80	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13990 AT4G13990
fragaria_vesca	FvH4_4g13210 FvH4_4g13212 FvH4_4g13213 FvH4_4g13214 FvH4_4g13214 FvH4_4g13214
malus_domestica	MD00G1064500.v1.1 MD00G1064600.v1.1 MD04G1017500.v1.1 MD04G1017600.v1.1 MD04G1017700.v1.1 MD04G1017900.v1.1
prunus_persica	Prupe.1G165700_v2.0.a1 Prupe.1G165800_v2.0.a1 Prupe.1G166100_v2.0.a1 Prupe.1G166200_v2.0.a1 Prupe.1G166300_v2.0.a1 Prupe.1G166600_v2.0.a1
pyrus_communis	pycom04g01400 pycom04g01410 pycom420g00900 pycom420g00910
rosa_chinensis	RchiOBHm_Chr1g0331261 RchiOBHm_Chr4g0413361 RchiOBHm_Chr4g0413371 RchiOBHm_Chr4g0413411
rosa_laevigata	RLG00000008220 RLG00000008221 RLG00000008222 RLG00000008223
rosa_multiflora	Rmu_sc0005828.1_g000002 Rmu_sc0007671.1_g000003 Rmu_sc0007671.1_g000004 Rmu_sc0007671.1_g000007 Rmu_sc0007671.1_g000010 Rmu_sc0009573.1_g000011 Rmu_sc0009573.1_g000012
rosa_roxburghii	Rroxscaffold_5G00357290 Rroxscaffold_5G00357300 Rroxscaffold_5G00357320
rosa_rugosa	Rorug04G0120200 Rorug04G0120300 Rorug04G0120400 Rorug04G0120500
rosa_samantha	Rh1AG117000 Rh4AG179600 Rh4AG179700 Rh4AG179800 Rh4BG178700 Rh4BG178800 Rh4BG178900 Rh4CG190200 Rh4CG190400 Rh4CG190500 Rh4CG190600 Rh4CG190700 Rh4DG174600 Rh4DG174700 Rh4DG174900
rosa_wichuraiana	Rw4G014930 Rw4G014940 Rw4G014960 Rw4G014980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1680, 1832
AasI	GACNNNNNNGTC	1 cut(s)	127
Acc36I	ACCTGC	2 cut(s)	298, 804
AccB7I	CCANNNNNTGG	2 cut(s)	1177, 1439
AccII	CGCG	1 cut(s)	1226
AccIII	TCCGGA	1 cut(s)	509
AciI	CCGC	5 cut(s)	94, 386, 454, 1226, 1737
AclWI	GGATC	5 cut(s)	338, 506, 1535, 1856, 1958
AcoI	YGGCCR	2 cut(s)	455, 1232
AcsI	RAATTY	7 cut(s)	89, 396, 460, 504, 782, 1791, 1914
AcuI	CTGAAG	2 cut(s)	1008, 1905
AcyI	GRCGYC	1 cut(s)	1059
AfaI	GTAC	3 cut(s)	832, 992, 1038
AfiI	CCNNNNNNNGG	6 cut(s)	196, 494, 1075, 1177, 1439, 1973
AhlI	ACTAGT	1 cut(s)	833
AjnI	CCWGG	5 cut(s)	330, 1438, 1594, 1666, 1865
AjuI	GAANNNNNNNTTGG	2 cut(s)	597, 629
AleI	CACNNNNGTG	1 cut(s)	623
AluBI	AGCT	9 cut(s)	144, 554, 906, 1302, 1487, 1572, 1622, 1676, 1849
AluI	AGCT	9 cut(s)	144, 554, 906, 1302, 1487, 1572, 1622, 1676, 1849
Alw21I	GWGCWC	1 cut(s)	908
Alw26I	GTCTC	8 cut(s)	6, 356, 1070, 1092, 1161, 1253, 1771, 2009
AlwI	GGATC	5 cut(s)	338, 506, 1535, 1856, 1958
AlwNI	CAGNNNCTG	1 cut(s)	807
Ama87I	CYCGRG	2 cut(s)	401, 600
Aor13HI	TCCGGA	1 cut(s)	509
AoxI	GGCC	6 cut(s)	282, 455, 1051, 1232, 1403, 1436
ApeKI	GCWGC	2 cut(s)	554, 1588
ApoI	RAATTY	7 cut(s)	89, 396, 460, 504, 782, 1791, 1914
ArsI	GACNNNNNNTTYG	1 cut(s)	37
Asp700I	GAANNNNTTC	1 cut(s)	595
AspLEI	GCGC	1 cut(s)	1432
AspS9I	GGNCC	2 cut(s)	282, 890
AsuC2I	CCSGG	2 cut(s)	368, 1544
AsuHPI	GGTGA	4 cut(s)	179, 713, 857, 1192
AvaI	CYCGRG	2 cut(s)	401, 600
AvaII	GGWCC	1 cut(s)	890
AxyI	CCTNAGG	1 cut(s)	823
BalI	TGGCCA	1 cut(s)	1234
BanII	GRGCYC	1 cut(s)	908
BauI	CACGAG	1 cut(s)	623
BbsI	GAAGAC	2 cut(s)	1157, 1893
Bbv12I	GWGCWC	1 cut(s)	908
BbvI	GCAGC	2 cut(s)	541, 1600
BccI	CCATC	4 cut(s)	470, 1077, 1517, 1671
BceAI	ACGGC	1 cut(s)	332
BciT130I	CCWGG	5 cut(s)	332, 1440, 1596, 1668, 1867
BciVI	GTATCC	1 cut(s)	1072
BclI	TGATCA	1 cut(s)	1474
BcnI	CCSGG	2 cut(s)	368, 1544
BcoDI	GTCTC	8 cut(s)	6, 356, 1070, 1092, 1161, 1253, 1771, 2009
BcuI	ACTAGT	1 cut(s)	833
BfaI	CTAG	7 cut(s)	293, 834, 1118, 1397, 1611, 1968, 2021
BfmI	CTRYAG	1 cut(s)	177
BfoI	RGCGCY	1 cut(s)	1433
BfuAI	ACCTGC	2 cut(s)	298, 804
BfuI	GTATCC	1 cut(s)	1072
BglI	GCCNNNNNGGC	1 cut(s)	454
BglII	AGATCT	1 cut(s)	1114
BisI	GCNGC	3 cut(s)	455, 555, 1589
BlsI	GCNGC	3 cut(s)	456, 556, 1590
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	7 cut(s)	332, 368, 1440, 1544, 1596, 1668, 1867
Bme18I	GGWCC	1 cut(s)	890
BmeT110I	CYCGRG	2 cut(s)	401, 600
BmgT120I	GGNCC	2 cut(s)	282, 890
BmrFI	CCNGG	7 cut(s)	332, 368, 1440, 1544, 1596, 1668, 1867
BmrI	ACTGGG	1 cut(s)	1886
BmsI	GCATC	3 cut(s)	217, 361, 435
BmuI	ACTGGG	1 cut(s)	1886
BoxI	GACNNNNGTC	1 cut(s)	1062
BpiI	GAAGAC	2 cut(s)	1157, 1893
BplI	GAGNNNNNCTC	2 cut(s)	541, 573
BpmI	CTGGAG	1 cut(s)	1578
BpuEI	CTTGAG	2 cut(s)	262, 1940
BpuMI	CCSGG	2 cut(s)	368, 1544
BsaHI	GRCGYC	1 cut(s)	1059
BsaI	GGTCTC	4 cut(s)	6, 356, 1161, 1253
BsaJI	CCNNGG	6 cut(s)	285, 366, 1235, 1433, 1595, 1865
BsaWI	WCCGGW	4 cut(s)	217, 509, 587, 743
BsaXI	ACNNNNNCTCC	2 cut(s)	820, 850
Bsc4I	CCNNNNNNNGG	6 cut(s)	196, 494, 1075, 1177, 1439, 1973
Bse118I	RCCGGY	1 cut(s)	448
Bse1I	ACTGG	4 cut(s)	1062, 1189, 1372, 1881
Bse21I	CCTNAGG	1 cut(s)	823
Bse3DI	GCAATG	4 cut(s)	303, 531, 647, 1821
BseAI	TCCGGA	1 cut(s)	509
BseBI	CCWGG	5 cut(s)	332, 1440, 1596, 1668, 1867
BseDI	CCNNGG	6 cut(s)	285, 366, 1235, 1433, 1595, 1865
BseGI	GGATG	6 cut(s)	232, 376, 559, 987, 1345, 1663
BseLI	CCNNNNNNNGG	6 cut(s)	196, 494, 1075, 1177, 1439, 1973
BseMI	GCAATG	4 cut(s)	303, 531, 647, 1821
BseMII	CTCAG	5 cut(s)	814, 837, 1264, 1587, 2004
BseNI	ACTGG	4 cut(s)	1062, 1189, 1372, 1881
BseXI	GCAGC	2 cut(s)	541, 1600
BsgI	GTGCAG	1 cut(s)	644
Bsh1236I	CGCG	1 cut(s)	1226
Bsh1285I	CGRYCG	1 cut(s)	748
BshFI	GGCC	6 cut(s)	284, 457, 1053, 1234, 1405, 1438
BsiEI	CGRYCG	1 cut(s)	748
BsiHKAI	GWGCWC	1 cut(s)	908
BsiHKCI	CYCGRG	2 cut(s)	401, 600
BsiSI	CCGG	7 cut(s)	218, 368, 449, 510, 588, 744, 1544
BslFI	GGGAC	1 cut(s)	1894
BslI	CCNNNNNNNGG	6 cut(s)	196, 494, 1075, 1177, 1439, 1973
BsmAI	GTCTC	8 cut(s)	6, 356, 1070, 1092, 1161, 1253, 1771, 2009
BsmFI	GGGAC	1 cut(s)	1894
BsnI	GGCC	6 cut(s)	284, 457, 1053, 1234, 1405, 1438
Bso31I	GGTCTC	4 cut(s)	6, 356, 1161, 1253
BsoBI	CYCGRG	2 cut(s)	401, 600
Bsp1286I	GDGCHC	1 cut(s)	908
Bsp13I	TCCGGA	1 cut(s)	509
Bsp143I	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
Bsp19I	CCATGG	1 cut(s)	1235
BspACI	CCGC	5 cut(s)	94, 386, 454, 1226, 1737
BspANI	GGCC	6 cut(s)	284, 457, 1053, 1234, 1405, 1438
BspCNI	CTCAG	5 cut(s)	813, 836, 1263, 1586, 2005
BspEI	TCCGGA	1 cut(s)	509
BspFNI	CGCG	1 cut(s)	1226
BspMI	ACCTGC	2 cut(s)	298, 804
BspPI	GGATC	5 cut(s)	338, 506, 1535, 1856, 1958
BspTNI	GGTCTC	4 cut(s)	6, 356, 1161, 1253
BsrDI	GCAATG	4 cut(s)	303, 531, 647, 1821
BsrFI	RCCGGY	1 cut(s)	448
BsrI	ACTGG	4 cut(s)	1062, 1189, 1372, 1881
BssAI	RCCGGY	1 cut(s)	448
BssECI	CCNNGG	6 cut(s)	285, 366, 1235, 1433, 1595, 1865
BssMI	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
BssNI	GRCGYC	1 cut(s)	1059
BssSI	CACGAG	1 cut(s)	623
BssT1I	CCWWGG	3 cut(s)	285, 1235, 1433
Bst2BI	CACGAG	1 cut(s)	623
Bst2UI	CCWGG	5 cut(s)	332, 1440, 1596, 1668, 1867
Bst4CI	ACNGT	6 cut(s)	203, 713, 809, 1093, 1535, 1552
Bst6I	CTCTTC	2 cut(s)	419, 1108
BstACI	GRCGYC	1 cut(s)	1059
BstC8I	GCNNGC	4 cut(s)	659, 1498, 1586, 1638
BstDEI	CTNAG	5 cut(s)	800, 823, 1250, 1573, 2013
BstDSI	CCRYGG	1 cut(s)	1235
BstF5I	GGATG	6 cut(s)	232, 376, 559, 987, 1345, 1663
BstFNI	CGCG	1 cut(s)	1226
BstH2I	RGCGCY	1 cut(s)	1433
BstHHI	GCGC	1 cut(s)	1432
BstKTI	GATC	9 cut(s)	346, 501, 772, 1117, 1477, 1530, 1619, 1864, 1966
BstMAI	GTCTC	8 cut(s)	6, 356, 1070, 1092, 1161, 1253, 1771, 2009
BstMBI	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
BstMCI	CGRYCG	1 cut(s)	748
BstMWI	GCNNNNNNNGC	4 cut(s)	454, 463, 658, 1493
BstNI	CCWGG	5 cut(s)	332, 1440, 1596, 1668, 1867
BstPAI	GACNNNNGTC	1 cut(s)	1062
BstSCI	CCNGG	7 cut(s)	330, 366, 1438, 1542, 1594, 1666, 1865
BstSFI	CTRYAG	1 cut(s)	177
BstUI	CGCG	1 cut(s)	1226
BstV1I	GCAGC	2 cut(s)	541, 1600
BstV2I	GAAGAC	2 cut(s)	1157, 1893
BstX2I	RGATCY	4 cut(s)	343, 1114, 1861, 1963
BstYI	RGATCY	4 cut(s)	343, 1114, 1861, 1963
Bsu36I	CCTNAGG	1 cut(s)	823
BsuI	GTATCC	1 cut(s)	1072
BsuRI	GGCC	6 cut(s)	284, 457, 1053, 1234, 1405, 1438
BtgI	CCRYGG	1 cut(s)	1235
BtsCI	GGATG	6 cut(s)	232, 376, 559, 987, 1345, 1663
BtsI	GCAGTG	1 cut(s)	1249
BtsIMutI	CAGTG	5 cut(s)	208, 1089, 1249, 1379, 1484
BveI	ACCTGC	2 cut(s)	298, 804
Cac8I	GCNNGC	4 cut(s)	659, 1498, 1586, 1638
CaiI	CAGNNNCTG	1 cut(s)	807
CfoI	GCGC	1 cut(s)	1432
Cfr10I	RCCGGY	1 cut(s)	448
Cfr13I	GGNCC	2 cut(s)	282, 890
CseI	GACGC	3 cut(s)	455, 1067, 1898
CsiI	ACCWGGT	1 cut(s)	330
Csp6I	GTAC	3 cut(s)	831, 991, 1037
CviAII	CATG	8 cut(s)	42, 147, 349, 716, 1177, 1236, 1276, 1444
CviQI	GTAC	3 cut(s)	831, 991, 1037
DdeI	CTNAG	5 cut(s)	800, 823, 1250, 1573, 2013
DpnI	GATC	9 cut(s)	345, 500, 771, 1116, 1476, 1529, 1618, 1863, 1965
DpnII	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
DraI	TTTAAA	1 cut(s)	1998
DrdI	GACNNNNNNGTC	1 cut(s)	127
DseDI	GACNNNNNNGTC	1 cut(s)	127
EaeI	YGGCCR	2 cut(s)	455, 1232
Eam1104I	CTCTTC	2 cut(s)	419, 1108
EarI	CTCTTC	2 cut(s)	419, 1108
Ecl136II	GAGCTC	1 cut(s)	906
Eco130I	CCWWGG	3 cut(s)	285, 1235, 1433
Eco147I	AGGCCT	3 cut(s)	1053, 1405, 1438
Eco24I	GRGCYC	1 cut(s)	908
Eco31I	GGTCTC	4 cut(s)	6, 356, 1161, 1253
Eco32I	GATATC	1 cut(s)	1394
Eco47I	GGWCC	1 cut(s)	890
Eco53kI	GAGCTC	1 cut(s)	906
Eco57I	CTGAAG	2 cut(s)	1008, 1905
Eco81I	CCTNAGG	1 cut(s)	823
Eco88I	CYCGRG	2 cut(s)	401, 600
EcoICRI	GAGCTC	1 cut(s)	906
EcoRI	GAATTC	2 cut(s)	396, 1914
EcoRII	CCWGG	5 cut(s)	330, 1438, 1594, 1666, 1865
EcoRV	GATATC	1 cut(s)	1394
EcoT14I	CCWWGG	3 cut(s)	285, 1235, 1433
EcoT22I	ATGCAT	1 cut(s)	376
EcoT38I	GRGCYC	1 cut(s)	908
ErhI	CCWWGG	3 cut(s)	285, 1235, 1433
FaeI	CATG	8 cut(s)	45, 150, 352, 719, 1180, 1239, 1279, 1447
FaqI	GGGAC	1 cut(s)	1894
FatI	CATG	8 cut(s)	41, 146, 348, 715, 1176, 1235, 1275, 1443
FauI	CCCGC	1 cut(s)	1744
FbaI	TGATCA	1 cut(s)	1474
Fnu4HI	GCNGC	3 cut(s)	455, 555, 1589
FokI	GGATG	6 cut(s)	239, 383, 546, 994, 1332, 1650
FriOI	GRGCYC	1 cut(s)	908
Fsp4HI	GCNGC	3 cut(s)	455, 555, 1589
FspBI	CTAG	7 cut(s)	293, 834, 1118, 1397, 1611, 1968, 2021
GlaI	GCGC	1 cut(s)	1431
GluI	GCNGC	3 cut(s)	455, 555, 1589
GsuI	CTGGAG	1 cut(s)	1578
HaeII	RGCGCY	1 cut(s)	1433
HaeIII	GGCC	6 cut(s)	284, 457, 1053, 1234, 1405, 1438
HapII	CCGG	7 cut(s)	218, 368, 449, 510, 588, 744, 1544
HgaI	GACGC	3 cut(s)	455, 1067, 1898
HhaI	GCGC	1 cut(s)	1432
Hin1I	GRCGYC	1 cut(s)	1059
Hin1II	CATG	8 cut(s)	45, 150, 352, 719, 1180, 1239, 1279, 1447
Hin6I	GCGC	1 cut(s)	1430
HinP1I	GCGC	1 cut(s)	1430
HincII	GTYRAC	2 cut(s)	354, 697
HindII	GTYRAC	2 cut(s)	354, 697
HindIII	AAGCTT	1 cut(s)	1300
HinfI	GANTC	9 cut(s)	107, 273, 734, 839, 1100, 1265, 1601, 1628, 1708
HpaI	GTTAAC	1 cut(s)	697
HpaII	CCGG	7 cut(s)	218, 368, 449, 510, 588, 744, 1544
HphI	GGTGA	4 cut(s)	179, 713, 857, 1192
Hpy166II	GTNNAC	4 cut(s)	354, 697, 721, 939
Hpy188I	TCNGA	6 cut(s)	53, 272, 343, 503, 803, 1097
Hpy8I	GTNNAC	4 cut(s)	354, 697, 721, 939
Hpy99I	CGWCG	1 cut(s)	471
HpyAV	CCTTC	6 cut(s)	48, 131, 547, 1289, 1552, 1819
HpyCH4III	ACNGT	6 cut(s)	203, 713, 809, 1093, 1535, 1552
HpyCH4V	TGCA	9 cut(s)	194, 230, 374, 647, 661, 1500, 1588, 1859, 1982
HpyF10VI	GCNNNNNNNGC	4 cut(s)	454, 463, 658, 1493
HpyF3I	CTNAG	5 cut(s)	800, 823, 1250, 1573, 2013
Hsp92I	GRCGYC	1 cut(s)	1059
Hsp92II	CATG	8 cut(s)	45, 150, 352, 719, 1180, 1239, 1279, 1447
HspAI	GCGC	1 cut(s)	1430
Kpn2I	TCCGGA	1 cut(s)	509
Ksp22I	TGATCA	1 cut(s)	1474
KspAI	GTTAAC	1 cut(s)	697
Kzo9I	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
LmnI	GCTCC	2 cut(s)	746, 1427
Lsp1109I	GCAGC	2 cut(s)	541, 1600
LweI	GCATC	3 cut(s)	217, 361, 435
MabI	ACCWGGT	1 cut(s)	330
MaeI	CTAG	7 cut(s)	293, 834, 1118, 1397, 1611, 1968, 2021
MaeIII	GTNAC	7 cut(s)	749, 813, 845, 1180, 1535, 1546, 1747
MalI	GATC	9 cut(s)	345, 500, 771, 1116, 1476, 1529, 1618, 1863, 1965
MboI	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
MboII	GAAGA	7 cut(s)	436, 764, 1095, 1162, 1651, 1898, 2000
MfeI	CAATTG	2 cut(s)	132, 688
MflI	RGATCY	4 cut(s)	343, 1114, 1861, 1963
MhlI	GDGCHC	1 cut(s)	908
MlsI	TGGCCA	1 cut(s)	1234
MluNI	TGGCCA	1 cut(s)	1234
MlyI	GAGTC	4 cut(s)	116, 1094, 1274, 1622
Mox20I	TGGCCA	1 cut(s)	1234
Mph1103I	ATGCAT	1 cut(s)	376
MroI	TCCGGA	1 cut(s)	509
MroXI	GAANNNNTTC	1 cut(s)	595
MscI	TGGCCA	1 cut(s)	1234
MseI	TTAA	5 cut(s)	222, 440, 696, 1838, 1997
MslI	CAYNNNNRTG	2 cut(s)	623, 1280
Msp20I	TGGCCA	1 cut(s)	1234
MspI	CCGG	7 cut(s)	218, 368, 449, 510, 588, 744, 1544
MspR9I	CCNGG	7 cut(s)	332, 368, 1440, 1544, 1596, 1668, 1867
MunI	CAATTG	2 cut(s)	132, 688
MvaI	CCWGG	5 cut(s)	332, 1440, 1596, 1668, 1867
MvnI	CGCG	1 cut(s)	1226
MwoI	GCNNNNNNNGC	4 cut(s)	454, 463, 658, 1493
NciI	CCSGG	2 cut(s)	368, 1544
NcoI	CCATGG	1 cut(s)	1235
NdeII	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
NlaIII	CATG	8 cut(s)	45, 150, 352, 719, 1180, 1239, 1279, 1447
NmeAIII	GCCGAG	1 cut(s)	1508
NmuCI	GTSAC	4 cut(s)	813, 845, 1180, 1747
NsiI	ATGCAT	1 cut(s)	376
OliI	CACNNNNGTG	1 cut(s)	623
PaeR7I	CTCGAG	2 cut(s)	401, 600
PceI	AGGCCT	3 cut(s)	1053, 1405, 1438
PdmI	GAANNNNTTC	1 cut(s)	595
PfeI	GAWTC	5 cut(s)	273, 734, 839, 1601, 1708
PflMI	CCANNNNNTGG	2 cut(s)	1177, 1439
PkrI	GCNGC	3 cut(s)	456, 556, 1590
PleI	GAGTC	4 cut(s)	115, 1094, 1273, 1622
PpsI	GAGTC	4 cut(s)	115, 1094, 1273, 1622
PshAI	GACNNNNGTC	1 cut(s)	1062
PsiI	TTATAA	2 cut(s)	1680, 1832
Psp124BI	GAGCTC	1 cut(s)	908
Psp6I	CCWGG	5 cut(s)	330, 1438, 1594, 1666, 1865
PspGI	CCWGG	5 cut(s)	330, 1438, 1594, 1666, 1865
PspPI	GGNCC	2 cut(s)	282, 890
PstNI	CAGNNNCTG	1 cut(s)	807
PsuI	RGATCY	4 cut(s)	343, 1114, 1861, 1963
RsaI	GTAC	3 cut(s)	832, 992, 1038
RsaNI	GTAC	3 cut(s)	831, 991, 1037
RseI	CAYNNNNRTG	2 cut(s)	623, 1280
SacI	GAGCTC	1 cut(s)	908
SaqAI	TTAA	5 cut(s)	222, 440, 696, 1838, 1997
SatI	GCNGC	3 cut(s)	455, 555, 1589
Sau3AI	GATC	9 cut(s)	343, 498, 769, 1114, 1474, 1527, 1616, 1861, 1963
Sau96I	GGNCC	2 cut(s)	282, 890
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	4 cut(s)	116, 1094, 1274, 1622
ScrFI	CCNGG	7 cut(s)	332, 368, 1440, 1544, 1596, 1668, 1867
SduI	GDGCHC	1 cut(s)	908
SexAI	ACCWGGT	1 cut(s)	330
SfaNI	GCATC	3 cut(s)	217, 361, 435
SfcI	CTRYAG	1 cut(s)	177
Sfr274I	CTCGAG	2 cut(s)	401, 600
SinI	GGWCC	1 cut(s)	890
SlaI	CTCGAG	2 cut(s)	401, 600
SmiMI	CAYNNNNRTG	2 cut(s)	623, 1280
SmlI	CTYRAG	4 cut(s)	277, 401, 600, 1919
SmoI	CTYRAG	4 cut(s)	277, 401, 600, 1919
SpeI	ACTAGT	1 cut(s)	833
SseBI	AGGCCT	3 cut(s)	1053, 1405, 1438
SsiI	CCGC	5 cut(s)	94, 386, 454, 1226, 1737
SspI	AATATT	1 cut(s)	1688
SspMI	CTAG	7 cut(s)	293, 834, 1118, 1397, 1611, 1968, 2021
SstI	GAGCTC	1 cut(s)	908
StuI	AGGCCT	3 cut(s)	1053, 1405, 1438
StyD4I	CCNGG	7 cut(s)	330, 366, 1438, 1542, 1594, 1666, 1865
StyI	CCWWGG	3 cut(s)	285, 1235, 1433
TaaI	ACNGT	6 cut(s)	203, 713, 809, 1093, 1535, 1552
TaqI	TCGA	4 cut(s)	402, 474, 601, 1626
TatI	WGTACW	1 cut(s)	830
TauI	GCSGC	1 cut(s)	457
TfiI	GAWTC	5 cut(s)	273, 734, 839, 1601, 1708
Tru1I	TTAA	5 cut(s)	222, 440, 696, 1838, 1997
Tru9I	TTAA	5 cut(s)	222, 440, 696, 1838, 1997
TscAI	CASTG	5 cut(s)	208, 1096, 1249, 1379, 1484
TseFI	GTSAC	4 cut(s)	813, 845, 1180, 1747
TseI	GCWGC	2 cut(s)	554, 1588
Tsp45I	GTSAC	4 cut(s)	813, 845, 1180, 1747
TspDTI	ATGAA	8 cut(s)	30, 258, 663, 998, 1165, 1334, 1571, 2001
TspRI	CASTG	5 cut(s)	208, 1096, 1249, 1379, 1484
Van91I	CCANNNNNTGG	2 cut(s)	1177, 1439
VpaK11BI	GGWCC	1 cut(s)	890
XapI	RAATTY	7 cut(s)	89, 396, 460, 504, 782, 1791, 1914
XbaI	TCTAGA	1 cut(s)	1396
XcmI	CCANNNNNNNNNTGG	2 cut(s)	355, 1873
XhoI	CTCGAG	2 cut(s)	401, 600
XmnI	GAANNNNTTC	1 cut(s)	595
XspI	CTAG	7 cut(s)	293, 834, 1118, 1397, 1611, 1968, 2021
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.