Prupe.1G318100_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
30597020 .. 30600822
3803 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G318100.3

Sequence Viewer

Length: 1419 bp
ATGAAGAAATTATGTGAGTTTTGCTCGGTACTAAGGCCAGTTGTGTACTGTAAAGCTGATGCAGCACATCTTTGCCTTTCCTGCGATGCAAAGGTCCACTCAGCAAACACTCTTTTTAACCGACATCTGCGTACTATCTTATGCAATTCATGCAAATACCGCCCCGCTTATGTTCTGTGTTTGGATCACAAGATGTTTATGTGTCGTGTCTGTGACATTACCCTGCATATTGCTTCCCAGCATCAGAAAAGGGCAACTAGCAGTTACAAAGGTTGCCCATCTGCTAAGGACTTTGCAGCATTTTGGGGTTTTGAATTGAACGAGCTAGACAGTAGTGCACATCTGGATGGAATTCTCTCCACTTCTTGTGGCTCTTCCTGTGACTCAACTGCAGTAAACTTAGATAGTTGTGAACAGTCTTGCTCTCAAGTTGAAGGCTTTCCAGTAGCAAATTCTCCCACCCTGGCTCCAGGTGTAGATTCTGAAGTGGGTTCACGCAGTCAACAATACAAGATTCTTGACTTAAAAAGGCTTCAGCTCACTGAAGGGAGAAGCCCTTCGCTTCTGATACGTGGCAAAGAACAAAGTGACTTATCTTCTTCAGTACATCACACATCAGGGAGGTTCGATGATAATCTTGATCAGAGTTTACAACATTCCGAGATTACTAGATTTAGGCAAAGGGACAGTCTACTTCAGGATCTGAAAGTTGATAATTTGCCATTTCCACTTTCTCAACTGGAGCACATGCCACCATCTTCAACTGCTGGACTTCCGTTGGATACAGAATCGTTTTGGCACTGCAGAAGTCCGGTTGAAAGTTGTCAGCTGTGGGCTCAAAATATGCAAGACATTGGGGTTTGTGAAGAACTTGTTTGTCATGATGATTTTAATATGCCTGATGTTGATATGACATTCCAAAACTTCGAAGAACTATTTGGAAGTGATCAAGATCCAACCAGAGCACTGCTTGATGATAAAGATGTACCATACTCCTCTGTGTTGAAGTATATATCCCTTGACAAATCAGATAATGGCCATGCAAGAGCAAGGATGGAGCATGATGCGTCAGAGGTTTCGTCTATTTTCTTTAACAAAGTTCAAAACCTTGAAGGAAGCATGGATTATTGCCCATGTCCTATTCAACCATCTTCTTCAACTTTGTCATTCTGTATGTCAAGGTTCAGTGCCGAAAGCAGCGGTACTGATTGTCATGAAAGCCGGCTTTCACCCTATATTGCCACAGGGTCTTCAAGAAATTCACCTCATGACCAAGAGGGTGGGCGCTTTGAAACCAGAGCAAATGCCATGACGAGGTACAAAGAGAAGAAGCATTCCCGACTGCTTGTGAGAAAAAATCGATATCCATTTAGGAAAGGTACAGCTGATAACGTAAGCGGGAAAAAGGAAGAGTTGTGA

Protein Analysis

473

Amino Acids

52.89

Weight (kDa)

5.98

Isoelectric Point (pI)

62.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 691
AciI CCGC 4 cut(s) 160, 165, 1200, 1398
AclWI GGATC 3 cut(s) 192, 708, 947
AcoI YGGCCR 1 cut(s) 1036
AcsI RAATTY 3 cut(s) 351, 451, 1258
AcuI CTGAAG 5 cut(s) 504, 518, 564, 585, 680
AfaI GTAC 8 cut(s) 30, 47, 133, 606, 987, 1204, 1319, 1381
AfiI CCNNNNNNNGG 1 cut(s) 1314
AjnI CCWGG 2 cut(s) 462, 469
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
AluBI AGCT 5 cut(s) 56, 325, 538, 829, 1385
AluI AGCT 5 cut(s) 56, 325, 538, 829, 1385
Alw21I GWGCWC 3 cut(s) 340, 747, 967
Alw44I GTGCAC 1 cut(s) 336
AlwI GGATC 3 cut(s) 192, 708, 947
AlwNI CAGNNNCTG 1 cut(s) 703
AoxI GGCC 2 cut(s) 35, 1036
ApaLI GTGCAC 1 cut(s) 336
ApeKI GCWGC 3 cut(s) 62, 296, 1197
ApoI RAATTY 3 cut(s) 351, 451, 1258
ArsI GACNNNNNNTTYG 2 cut(s) 673, 705
Asp700I GAANNNNTTC 2 cut(s) 438, 556
AspLEI GCGC 1 cut(s) 1287
AspS9I GGNCC 1 cut(s) 94
AsuHPI GGTGA 2 cut(s) 1221, 1254
AsuII TTCGAA 1 cut(s) 927
AvaII GGWCC 1 cut(s) 94
BaeGI GKGCMC 1 cut(s) 340
BalI TGGCCA 1 cut(s) 1038
BanII GRGCYC 1 cut(s) 838
BbsI GAAGAC 1 cut(s) 1242
Bbv12I GWGCWC 3 cut(s) 340, 747, 967
BbvI GCAGC 3 cut(s) 74, 308, 1209
BccI CCATC 5 cut(s) 286, 341, 763, 1048, 1156
BciT130I CCWGG 2 cut(s) 464, 471
BciVI GTATCC 1 cut(s) 775
BclI TGATCA 2 cut(s) 640, 946
BfaI CTAG 3 cut(s) 258, 326, 669
BfmI CTRYAG 2 cut(s) 390, 802
BfoI RGCGCY 1 cut(s) 1288
BfuI GTATCC 1 cut(s) 775
BisI GCNGC 3 cut(s) 63, 297, 1198
BlsI GCNGC 3 cut(s) 64, 298, 1199
Bme1390I CCNGG 2 cut(s) 464, 471
Bme18I GGWCC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 94
BmiI GGNNCC 1 cut(s) 468
BmrFI CCNGG 2 cut(s) 464, 471
BmsI GCATC 4 cut(s) 49, 76, 250, 1054
BpiI GAAGAC 1 cut(s) 1242
BplI GAGNNNNNCTC 2 cut(s) 8, 40
BpmI CTGGAG 2 cut(s) 453, 761
Bpu10I CCTNAGC 1 cut(s) 285
Bpu14I TTCGAA 1 cut(s) 927
BpuEI CTTGAG 1 cut(s) 411
Bsa29I ATCGAT 1 cut(s) 1360
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 2 cut(s) 633, 951
BsaJI CCNNGG 1 cut(s) 462
BsaWI WCCGGW 1 cut(s) 811
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 1 cut(s) 1314
Bse118I RCCGGY 1 cut(s) 1221
Bse1I ACTGG 3 cut(s) 38, 443, 744
Bse8I GATNNNNATC 2 cut(s) 633, 951
BseBI CCWGG 2 cut(s) 464, 471
BseCI ATCGAT 1 cut(s) 1360
BseDI CCNNGG 1 cut(s) 462
BseGI GGATG 2 cut(s) 352, 1059
BseJI GATNNNNATC 2 cut(s) 633, 951
BseLI CCNNNNNNNGG 1 cut(s) 1314
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 3 cut(s) 38, 443, 744
BseRI GAGGAG 1 cut(s) 985
BseSI GKGCMC 1 cut(s) 340
BseXI GCAGC 3 cut(s) 74, 308, 1209
BseYI CCCAGC 1 cut(s) 237
BshFI GGCC 2 cut(s) 37, 1038
BshVI ATCGAT 1 cut(s) 1360
BsiHKAI GWGCWC 3 cut(s) 340, 747, 967
BsiSI CCGG 2 cut(s) 812, 1222
BslFI GGGAC 1 cut(s) 698
BslI CCNNNNNNNGG 1 cut(s) 1314
BsmFI GGGAC 1 cut(s) 698
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 2 cut(s) 37, 1038
Bsp119I TTCGAA 1 cut(s) 927
Bsp1286I GDGCHC 4 cut(s) 340, 747, 838, 967
Bsp143I GATC 5 cut(s) 184, 640, 700, 946, 952
BspACI CCGC 4 cut(s) 160, 165, 1200, 1398
BspANI GGCC 2 cut(s) 37, 1038
BspCNI CTCAG 1 cut(s) 113
BspDI ATCGAT 1 cut(s) 1360
BspHI TCATGA 3 cut(s) 880, 1213, 1267
BspLI GGNNCC 1 cut(s) 468
BspMAI CTGCAG 2 cut(s) 394, 806
BspPI GGATC 3 cut(s) 192, 708, 947
BspQI GCTCTTC 1 cut(s) 379
BspT104I TTCGAA 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 1221
BsrI ACTGG 3 cut(s) 38, 443, 744
BssAI RCCGGY 1 cut(s) 1221
BssECI CCNNGG 1 cut(s) 462
BssMI GATC 5 cut(s) 184, 640, 700, 946, 952
Bst2UI CCWGG 2 cut(s) 464, 471
Bst4CI ACNGT 4 cut(s) 50, 332, 417, 689
Bst6I CTCTTC 2 cut(s) 379, 1404
BstAPI GCANNNNNTGC 1 cut(s) 150
BstBAI YACGTR 1 cut(s) 572
BstBI TTCGAA 1 cut(s) 927
BstC8I GCNNGC 1 cut(s) 1223
BstDEI CTNAG 4 cut(s) 32, 100, 285, 400
BstF5I GGATG 2 cut(s) 352, 1059
BstH2I RGCGCY 1 cut(s) 1288
BstHHI GCGC 1 cut(s) 1287
BstKTI GATC 5 cut(s) 187, 643, 703, 949, 955
BstMBI GATC 5 cut(s) 184, 640, 700, 946, 952
BstMWI GCNNNNNNNGC 4 cut(s) 62, 81, 150, 159
BstNI CCWGG 2 cut(s) 464, 471
BstNSI RCATGY 1 cut(s) 751
BstSCI CCNGG 2 cut(s) 462, 469
BstSFI CTRYAG 2 cut(s) 390, 802
BstSLI GKGCMC 1 cut(s) 340
BstV1I GCAGC 3 cut(s) 74, 308, 1209
BstV2I GAAGAC 1 cut(s) 1242
BstX2I RGATCY 2 cut(s) 700, 952
BstXI CCANNNNNNTGG 1 cut(s) 1280
BstYI RGATCY 2 cut(s) 700, 952
Bsu15I ATCGAT 1 cut(s) 1360
BsuI GTATCC 1 cut(s) 775
BsuRI GGCC 2 cut(s) 37, 1038
BsuTUI ATCGAT 1 cut(s) 1360
BtgZI GCGATG 1 cut(s) 99
BtsCI GGATG 2 cut(s) 352, 1059
BtsI GCAGTG 2 cut(s) 799, 965
BtsIMutI CAGTG 4 cut(s) 540, 799, 965, 1192
Cac8I GCNNGC 1 cut(s) 1223
CaiI CAGNNNCTG 1 cut(s) 703
CciI TCATGA 3 cut(s) 880, 1213, 1267
CfoI GCGC 1 cut(s) 1287
Cfr10I RCCGGY 1 cut(s) 1221
Cfr13I GGNCC 1 cut(s) 94
ClaI ATCGAT 1 cut(s) 1360
CseI GACGC 1 cut(s) 1056
Csp6I GTAC 8 cut(s) 29, 46, 132, 605, 986, 1203, 1318, 1380
CviQI GTAC 8 cut(s) 29, 46, 132, 605, 986, 1203, 1318, 1380
DdeI CTNAG 4 cut(s) 32, 100, 285, 400
DpnI GATC 5 cut(s) 186, 642, 702, 948, 954
DpnII GATC 5 cut(s) 184, 640, 700, 946, 952
EaeI YGGCCR 1 cut(s) 1036
Eam1104I CTCTTC 2 cut(s) 379, 1404
EarI CTCTTC 2 cut(s) 379, 1404
Eco24I GRGCYC 1 cut(s) 838
Eco32I GATATC 1 cut(s) 1364
Eco47I GGWCC 1 cut(s) 94
Eco57I CTGAAG 5 cut(s) 504, 518, 564, 585, 680
EcoRI GAATTC 1 cut(s) 351
EcoRII CCWGG 2 cut(s) 462, 469
EcoRV GATATC 1 cut(s) 1364
EcoT38I GRGCYC 1 cut(s) 838
FaqI GGGAC 1 cut(s) 698
FauI CCCGC 2 cut(s) 172, 1391
FbaI TGATCA 2 cut(s) 640, 946
FblI GTMKAC 1 cut(s) 691
Fnu4HI GCNGC 3 cut(s) 63, 297, 1198
FokI GGATG 2 cut(s) 359, 1066
FriOI GRGCYC 1 cut(s) 838
Fsp4HI GCNGC 3 cut(s) 63, 297, 1198
FspBI CTAG 3 cut(s) 258, 326, 669
GlaI GCGC 1 cut(s) 1286
GluI GCNGC 3 cut(s) 63, 297, 1198
GsaI CCCAGC 1 cut(s) 241
GsuI CTGGAG 2 cut(s) 453, 761
HaeII RGCGCY 1 cut(s) 1288
HaeIII GGCC 2 cut(s) 37, 1038
HapII CCGG 2 cut(s) 812, 1222
HgaI GACGC 1 cut(s) 1056
HhaI GCGC 1 cut(s) 1287
Hin6I GCGC 1 cut(s) 1285
HinP1I GCGC 1 cut(s) 1285
HincII GTYRAC 1 cut(s) 503
HindII GTYRAC 1 cut(s) 503
HinfI GANTC 4 cut(s) 383, 479, 514, 788
HpaII CCGG 2 cut(s) 812, 1222
HphI GGTGA 2 cut(s) 1221, 1254
Hpy166II GTNNAC 9 cut(s) 46, 97, 338, 397, 413, 494, 503, 650, 692
Hpy188I TCNGA 8 cut(s) 246, 484, 567, 645, 661, 705, 1030, 1072
Hpy8I GTNNAC 9 cut(s) 46, 97, 338, 397, 413, 494, 503, 650, 692
HpyAV CCTTC 4 cut(s) 428, 539, 567, 1106
HpyCH4III ACNGT 4 cut(s) 50, 332, 417, 689
HpyCH4IV ACGT 2 cut(s) 571, 1392
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 81, 150, 159
HpyF3I CTNAG 4 cut(s) 32, 100, 285, 400
HpySE526I ACGT 2 cut(s) 571, 1392
HspAI GCGC 1 cut(s) 1285
KroI GCCGGC 1 cut(s) 1221
KroNI GCCGGC 1 cut(s) 1223
Ksp22I TGATCA 2 cut(s) 640, 946
Kzo9I GATC 5 cut(s) 184, 640, 700, 946, 952
LguI GCTCTTC 1 cut(s) 379
LmnI GCTCC 3 cut(s) 472, 742, 1057
Lsp1109I GCAGC 3 cut(s) 74, 308, 1209
LweI GCATC 4 cut(s) 49, 76, 250, 1054
MaeI CTAG 3 cut(s) 258, 326, 669
MaeII ACGT 2 cut(s) 571, 1392
MaeIII GTNAC 4 cut(s) 212, 263, 380, 587
MalI GATC 5 cut(s) 186, 642, 702, 948, 954
MboI GATC 5 cut(s) 184, 640, 700, 946, 952
MflI RGATCY 2 cut(s) 700, 952
MhlI GDGCHC 4 cut(s) 340, 747, 838, 967
MlsI TGGCCA 1 cut(s) 1038
MluCI AATT 7 cut(s) 8, 145, 314, 351, 451, 715, 1258
MluNI TGGCCA 1 cut(s) 1038
MlyI GAGTC 1 cut(s) 377
MmeI TCCRAC 2 cut(s) 759, 980
MnlI CCTC 6 cut(s) 615, 1006, 1066, 1270, 1275, 1308
Mox20I TGGCCA 1 cut(s) 1038
MroNI GCCGGC 1 cut(s) 1221
MroXI GAANNNNTTC 2 cut(s) 438, 556
MscI TGGCCA 1 cut(s) 1038
MseI TTAA 4 cut(s) 117, 524, 891, 1092
MslI CAYNNNNRTG 1 cut(s) 345
Msp20I TGGCCA 1 cut(s) 1038
MspA1I CMGCKG 3 cut(s) 829, 1200, 1385
MspI CCGG 2 cut(s) 812, 1222
MspR9I CCNGG 2 cut(s) 464, 471
Mva1269I GAATGC 1 cut(s) 1333
MvaI CCWGG 2 cut(s) 464, 471
MwoI GCNNNNNNNGC 4 cut(s) 62, 81, 150, 159
NaeI GCCGGC 1 cut(s) 1223
NdeII GATC 5 cut(s) 184, 640, 700, 946, 952
NgoMIV GCCGGC 1 cut(s) 1221
NlaIV GGNNCC 1 cut(s) 468
NmuCI GTSAC 3 cut(s) 212, 380, 587
NspI RCATGY 1 cut(s) 751
NspV TTCGAA 1 cut(s) 927
PagI TCATGA 3 cut(s) 880, 1213, 1267
PciSI GCTCTTC 1 cut(s) 379
PctI GAATGC 1 cut(s) 1333
PdiI GCCGGC 1 cut(s) 1223
PdmI GAANNNNTTC 2 cut(s) 438, 556
PfeI GAWTC 3 cut(s) 479, 514, 788
PkrI GCNGC 3 cut(s) 64, 298, 1199
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
Ppu21I YACGTR 1 cut(s) 572
Psp6I CCWGG 2 cut(s) 462, 469
PspFI CCCAGC 1 cut(s) 237
PspGI CCWGG 2 cut(s) 462, 469
PspN4I GGNNCC 1 cut(s) 468
PspPI GGNCC 1 cut(s) 94
PstI CTGCAG 2 cut(s) 394, 806
PstNI CAGNNNCTG 1 cut(s) 703
PsuI RGATCY 2 cut(s) 700, 952
PvuII CAGCTG 2 cut(s) 829, 1385
RsaI GTAC 8 cut(s) 30, 47, 133, 606, 987, 1204, 1319, 1381
RsaNI GTAC 8 cut(s) 29, 46, 132, 605, 986, 1203, 1318, 1380
RseI CAYNNNNRTG 1 cut(s) 345
SapI GCTCTTC 1 cut(s) 379
SaqAI TTAA 4 cut(s) 117, 524, 891, 1092
SatI GCNGC 3 cut(s) 63, 297, 1198
Sau3AI GATC 5 cut(s) 184, 640, 700, 946, 952
Sau96I GGNCC 1 cut(s) 94
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 2 cut(s) 464, 471
SduI GDGCHC 4 cut(s) 340, 747, 838, 967
SfaNI GCATC 4 cut(s) 49, 76, 250, 1054
SfcI CTRYAG 2 cut(s) 390, 802
SfuI TTCGAA 1 cut(s) 927
SinI GGWCC 1 cut(s) 94
SmiMI CAYNNNNRTG 1 cut(s) 345
SmlI CTYRAG 1 cut(s) 426
SmoI CTYRAG 1 cut(s) 426
Sse9I AATT 7 cut(s) 8, 145, 314, 351, 451, 715, 1258
SsiI CCGC 4 cut(s) 160, 165, 1200, 1398
SspMI CTAG 3 cut(s) 258, 326, 669
StyD4I CCNGG 2 cut(s) 462, 469
TaaI ACNGT 4 cut(s) 50, 332, 417, 689
TaiI ACGT 2 cut(s) 574, 1395
TaqI TCGA 3 cut(s) 627, 927, 1360
TasI AATT 7 cut(s) 8, 145, 314, 351, 451, 715, 1258
TatI WGTACW 2 cut(s) 45, 604
TfiI GAWTC 3 cut(s) 479, 514, 788
Tru1I TTAA 4 cut(s) 117, 524, 891, 1092
Tru9I TTAA 4 cut(s) 117, 524, 891, 1092
TscAI CASTG 4 cut(s) 547, 806, 972, 1192
TseFI GTSAC 3 cut(s) 212, 380, 587
TseI GCWGC 3 cut(s) 62, 296, 1197
Tsp45I GTSAC 3 cut(s) 212, 380, 587
TspDTI ATGAA 3 cut(s) 17, 138, 1230
TspGWI ACGGA 1 cut(s) 765
TspRI CASTG 4 cut(s) 547, 806, 972, 1192
VneI GTGCAC 1 cut(s) 336
VpaK11BI GGWCC 1 cut(s) 94
XapI RAATTY 3 cut(s) 351, 451, 1258
XceI RCATGY 1 cut(s) 751
XmiI GTMKAC 1 cut(s) 691
XmnI GAANNNNTTC 2 cut(s) 438, 556
XspI CTAG 3 cut(s) 258, 326, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.