Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001104

Physical Location & Seq

Genomic Coordinates Forward (+)

44758725 .. 44761089

Gene Structure 2365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0275200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGAGAAAGGGAAGAGACCTGCTGAGGAAGGTAAGGGAAAGAAAAGGAGTGGGAAGCCTAGATTATGATCTTAATGCTGATGAGTTTGATGATGTGGAGTTTCAAGAAAATGGTTTTGAACCAAGGGTTGTGCCAGAATTTGATGAGATGGGTTTCATTCCAAAGAGAGGACTTAAGGGAGTGAAGATCAGAACTGTTGATCTGAAAAATCCTAAGTTTAGATTAGGTCTAGCATTCCCAAATTTAGAGCAATTGAAGGAAGCTGTAAGGGAGTGTGCTATCAGAAATGAACTTGGGATATGGTTTGAAAAAAAATCAAAGAAGAAGATAAAGGTGAATTGTCAATGGGACTGCCCATTTAGGTTGTATGCTAACACAACTAAATGTGAGGGTGAGACCTTGATTGTCAAGACTCTGAACAACAAGCATAACTGCAGTCCAGTGGAAACAAGTCATTTTTTTACTTATAGGAGAATAGCTCAAGAGGTAGCTGAAGATCTATTGGTGGATGAGAATTGGTCTAGGAAAGGCATCCACAACCACATTGAGAAGAAGTTCAAGTTGGACGTGGGTGTTCAAACAATAACCAGAGCAAAAAGAGCTGCCAAAAGGATGAATAAGGGCCACTATATTGAGCAGTACAACAAGCTTGCTGCATATAAGAAAAAGCTGTTGAGAAGCAACCCTGGATCCACTATGGAAATCAAGACTCAAATGGACAGTCCTGTAAGGAGGTTTCACATGATGTACCAACAGGGGCATGCATGCAAGAAGGGTTGGATGAAGGGTTGCAGGCCTCTTATAGGCTTGGATGGAGCTCACCTAAAGGGGCATCACCCTGGACAACTTTTAACTGCCATTGGCATAGATGCTAACCATGGGATGTTTTTAATTGCATTTGCCATAGCTGAGGTTGAGAACCAAGAGACTTGGACATGGTTCCTTGAATATCTGAAGTGGGATCTCAGAATAAAAAGGGACAACAGTTACACATTTATGACTGATAAGCAAAAGAGGCTGGGAAATGCCATTGCAGGTTTATTTCCAAATGCAGAGCACAAGCACTGTGTTAGGCACCTCTATAATAACTTCAAGGCAAAGCATCCAAGAGAGAGGCTTAAACAGCTGGTTTGGAATGCTGCCAGATCAAGTACTGTGGTATGGTATAACAGACACATGGAGGAGTTGAGAGTGTTGAGTGAGCAAGCATGGAGGTGGTTTGAAGACAAGAACCCTGCACAGTGGAGTAGGGCCTATTTCAGAGATGAGTTCAAGTATGACATCCTACTAAACAACTTGTGTGAGTCCTTTAATTCAGCCATACTACTTGCTAGGGATAAGCCTATTATCACTATGTTGGAGAAGATTAGGATAGACATGATGGTTAGGAATGCAAATAGAAGGGCTGCTTGTGAGAGGTGGAAGGATTTAGTTGGTCCTAGGATTAAAAAGATAATAGACAAGATTGGGCAGAGGGTTACATGCTATAGAGCTCATAAAAGTGGGGAATTTATCTTTCAAATTACTGGAAGTGATGACATGGGCAGTAAGCATGCTGTAGACTTAAGACTCCATACATGCACCTGCAAGAGGTGGCAGCTCAGTGGGATACCATGTGTGCGTGCTATATGTGCAATCAGGTTCAAGAAACATAAGGGGAGGATGACTGGGAGCCAGTTGACTATCCCATTGCACCTTCACATTTTAAGGTGTAGCCTGGTAGGCCTAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT

Protein Analysis

577

Amino Acids

67.52

Weight (kDa)

9.8

Isoelectric Point (pI)

35.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DBD_Tnp_Mut	PF03108	72 - 126	2.1e-10	MuDR family transposase
MULE	PF10551	268 - 363	9.5e-19	MULE transposase domain
Transposase_mut	PF00872	283 - 376	6.4e-07	Transposase, Mutator family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68190 AT1G68190 AT1G68190
fragaria_vesca	FvH4_4g26540 FvH4_4g26540 FvH4_4g26550
malus_domestica	MD13G1034200.v1.1 MD13G1034400.v1.1 MD16G1035900.v1.1
prunus_persica	Prupe.1G318100_v2.0.a1 Prupe.1G318100_v2.0.a1 Prupe.1G318100_v2.0.a1 Prupe.1G318100_v2.0.a1 Prupe.1G318400_v2.0.a1 Prupe.1G318400_v2.0.a1 Prupe.1G318400_v2.0.a1
pyrus_communis	pycom13g02950 pycom13g02960 pycom16g03080
rosa_chinensis	RchiOBHm_Chr4g0434171 RchiOBHm_Chr4g0434181 RchiOBHm_Chr4g0434191 RchiOBHm_Chr4g0434201
rosa_laevigata	RLG00000006693 RLG00000006694 RLG00000006695
rosa_multiflora	Rmu_sc0000459.1_g000002 Rmu_sc0000459.1_g000009
rosa_roxburghii	Rroxscaffold_5G00375560 Rroxscaffold_5G00375570 Rroxscaffold_5G00375580
rosa_rugosa	Rorug04G0274800 Rorug04G0274900 Rorug04G0275000.1 Rorug04G0275100 Rorug04G0275200 Rorug04G0275300 Rorug04G0275400
rosa_samantha	Rh4AG329700 Rh4AG329800 Rh4AG329900 Rh4AG330000 Rh4BG337300 Rh4BG337400 Rh4BG337500 Rh4BG337600 Rh4CG352700 Rh4CG352800 Rh4CG352900 Rh4CG353000 Rh4DG333300 Rh4DG333400 Rh4DG333500 Rh4DG333600
rosa_wichuraiana	Rw0G007010 Rw0G007020 Rw4G028590 Rw4G028600 Rw4G028620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1592
Acc36I	ACCTGC	3 cut(s)	27, 1025, 1592
AccB1I	GGYRCC	1 cut(s)	1074
AccI	GTMKAC	1 cut(s)	1560
AclWI	GGATC	3 cut(s)	684, 697, 969
AcsI	RAATTY	3 cut(s)	137, 241, 1508
AcuI	CTGAAG	2 cut(s)	513, 974
AfaI	GTAC	3 cut(s)	641, 749, 1153
AfiI	CCNNNNNNNGG	3 cut(s)	167, 803, 1590
AflII	CTTAAG	2 cut(s)	173, 1564
AjiI	CACGTC	1 cut(s)	568
AjnI	CCWGG	3 cut(s)	685, 838, 1716
AjuI	GAANNNNNNNTTGG	2 cut(s)	545, 577
Alw21I	GWGCWC	3 cut(s)	820, 1059, 1495
Alw26I	GTCTC	3 cut(s)	9, 389, 920
AlwI	GGATC	3 cut(s)	684, 697, 969
AoxI	GGCC	4 cut(s)	622, 794, 1251, 1723
ApeKI	GCWGC	5 cut(s)	602, 653, 1139, 1406, 1597
ApoI	RAATTY	3 cut(s)	137, 241, 1508
ArsI	GACNNNNNNTTYG	2 cut(s)	706, 738
Asp700I	GAANNNNTTC	1 cut(s)	554
AspA2I	CCTAGG	1 cut(s)	1439
AspS9I	GGNCC	3 cut(s)	622, 1251, 1436
AsuHPI	GGTGA	4 cut(s)	346, 404, 812, 827
AvaII	GGWCC	1 cut(s)	1436
AvrII	CCTAGG	1 cut(s)	1439
BamHI	GGATCC	1 cut(s)	689
BanI	GGYRCC	1 cut(s)	1074
BanII	GRGCYC	2 cut(s)	820, 1495
BbsI	GAAGAC	1 cut(s)	1230
Bbv12I	GWGCWC	3 cut(s)	820, 1059, 1495
BbvCI	CCTCAGC	2 cut(s)	23, 909
BbvI	GCAGC	5 cut(s)	589, 640, 1126, 1393, 1609
BccI	CCATC	3 cut(s)	142, 806, 1375
BciT130I	CCWGG	3 cut(s)	687, 840, 1718
BciVI	GTATCC	1 cut(s)	1602
BcoDI	GTCTC	3 cut(s)	9, 389, 920
BfaI	CTAG	5 cut(s)	59, 230, 522, 1332, 1440
BfmI	CTRYAG	3 cut(s)	433, 1486, 1557
BfrI	CTTAAG	2 cut(s)	173, 1564
BfuAI	ACCTGC	3 cut(s)	27, 1025, 1592
BfuI	GTATCC	1 cut(s)	1602
BglI	GCCNNNNNGGC	1 cut(s)	1722
BglII	AGATCT	1 cut(s)	496
BisI	GCNGC	5 cut(s)	603, 654, 1140, 1407, 1598
BlnI	CCTAGG	1 cut(s)	1439
BlsI	GCNGC	5 cut(s)	604, 655, 1141, 1408, 1599
BmcAI	AGTACT	1 cut(s)	1153
Bme1390I	CCNGG	3 cut(s)	687, 840, 1718
Bme18I	GGWCC	1 cut(s)	1436
BmgBI	CACGTC	1 cut(s)	568
BmgT120I	GGNCC	3 cut(s)	622, 1251, 1436
BmiI	GGNNCC	4 cut(s)	691, 941, 1076, 1673
BmrFI	CCNGG	3 cut(s)	687, 840, 1718
BmrI	ACTGGG	1 cut(s)	1677
BmsI	GCATC	4 cut(s)	540, 841, 859, 1111
BmuI	ACTGGG	1 cut(s)	1677
BpiI	GAAGAC	1 cut(s)	1230
BplI	GAGNNNNNCTC	2 cut(s)	463, 495
Bpu10I	CCTNAGC	2 cut(s)	23, 909
BpuEI	CTTGAG	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	66
BsaI	GGTCTC	2 cut(s)	9, 389
BsaJI	CCNNGG	5 cut(s)	122, 685, 838, 877, 1439
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 803, 1590
Bse1I	ACTGG	4 cut(s)	440, 1531, 1672, 1675
Bse3DI	GCAATG	2 cut(s)	1029, 1688
Bse8I	GATNNNNATC	1 cut(s)	66
BseBI	CCWGG	3 cut(s)	687, 840, 1718
BseDI	CCNNGG	5 cut(s)	122, 685, 838, 877, 1439
BseGI	GGATG	9 cut(s)	514, 531, 618, 786, 817, 888, 1102, 1281, 1668
BseJI	GATNNNNATC	1 cut(s)	66
BseLI	CCNNNNNNNGG	3 cut(s)	167, 803, 1590
BseMI	GCAATG	2 cut(s)	1029, 1688
BseMII	CTCAG	4 cut(s)	14, 900, 979, 1615
BseNI	ACTGG	4 cut(s)	440, 1531, 1672, 1675
BseRI	GAGGAG	1 cut(s)	1196
BseXI	GCAGC	5 cut(s)	589, 640, 1126, 1393, 1609
BseYI	CCCAGC	1 cut(s)	1018
BsgI	GTGCAG	1 cut(s)	1221
BshFI	GGCC	4 cut(s)	624, 796, 1253, 1725
BshNI	GGYRCC	1 cut(s)	1074
BsiHKAI	GWGCWC	3 cut(s)	820, 1059, 1495
BslFI	GGGAC	2 cut(s)	362, 992
BslI	CCNNNNNNNGG	3 cut(s)	167, 803, 1590
BsmAI	GTCTC	3 cut(s)	9, 389, 920
BsmFI	GGGAC	2 cut(s)	362, 992
BsmI	GAATGC	3 cut(s)	233, 1141, 1396
BsnI	GGCC	4 cut(s)	624, 796, 1253, 1725
Bso31I	GGTCTC	2 cut(s)	9, 389
Bsp1286I	GDGCHC	3 cut(s)	820, 1059, 1495
Bsp143I	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
Bsp19I	CCATGG	1 cut(s)	877
BspANI	GGCC	4 cut(s)	624, 796, 1253, 1725
BspCNI	CTCAG	4 cut(s)	15, 901, 978, 1614
BspLI	GGNNCC	4 cut(s)	691, 941, 1076, 1673
BspMAI	CTGCAG	1 cut(s)	437
BspMI	ACCTGC	3 cut(s)	27, 1025, 1592
BspPI	GGATC	3 cut(s)	684, 697, 969
BspT107I	GGYRCC	1 cut(s)	1074
BspTI	CTTAAG	2 cut(s)	173, 1564
BspTNI	GGTCTC	2 cut(s)	9, 389
BsrDI	GCAATG	2 cut(s)	1029, 1688
BsrI	ACTGG	4 cut(s)	440, 1531, 1672, 1675
BssECI	CCNNGG	5 cut(s)	122, 685, 838, 877, 1439
BssMI	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
BssT1I	CCWWGG	3 cut(s)	122, 877, 1439
Bst2UI	CCWGG	3 cut(s)	687, 840, 1718
Bst4CI	ACNGT	6 cut(s)	196, 722, 986, 1067, 1156, 1242
Bst6I	CTCTTC	1 cut(s)	7
BstAFI	CTTAAG	2 cut(s)	173, 1564
BstC8I	GCNNGC	7 cut(s)	651, 762, 766, 794, 1206, 1554, 1623
BstDEI	CTNAG	6 cut(s)	23, 213, 909, 965, 1601, 1727
BstDSI	CCRYGG	1 cut(s)	877
BstENI	CCTNNNNNAGG	2 cut(s)	801, 1588
BstF5I	GGATG	9 cut(s)	514, 531, 618, 786, 817, 888, 1102, 1281, 1668
BstKTI	GATC	7 cut(s)	70, 189, 202, 499, 692, 964, 1148
BstMAI	GTCTC	3 cut(s)	9, 389, 920
BstMBI	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
BstMWI	GCNNNNNNNGC	5 cut(s)	599, 1015, 1123, 1631, 1722
BstNI	CCWGG	3 cut(s)	687, 840, 1718
BstNSI	RCATGY	5 cut(s)	764, 768, 1485, 1556, 1581
BstSCI	CCNGG	3 cut(s)	685, 838, 1716
BstSFI	CTRYAG	3 cut(s)	433, 1486, 1557
BstV1I	GCAGC	5 cut(s)	589, 640, 1126, 1393, 1609
BstV2I	GAAGAC	1 cut(s)	1230
BstX2I	RGATCY	3 cut(s)	496, 689, 961
BstYI	RGATCY	3 cut(s)	496, 689, 961
BsuI	GTATCC	1 cut(s)	1602
BsuRI	GGCC	4 cut(s)	624, 796, 1253, 1725
BtgI	CCRYGG	1 cut(s)	877
BtrI	CACGTC	1 cut(s)	568
BtsCI	GGATG	9 cut(s)	514, 531, 618, 786, 817, 888, 1102, 1281, 1668
BtsIMutI	CAGTG	4 cut(s)	447, 1063, 1247, 1609
BveI	ACCTGC	3 cut(s)	27, 1025, 1592
Cac8I	GCNNGC	7 cut(s)	651, 762, 766, 794, 1206, 1554, 1623
Cfr13I	GGNCC	3 cut(s)	622, 1251, 1436
Csp6I	GTAC	3 cut(s)	640, 748, 1152
CspCI	CAANNNNNGTGG	2 cut(s)	1137, 1172
CviQI	GTAC	3 cut(s)	640, 748, 1152
DdeI	CTNAG	6 cut(s)	23, 213, 909, 965, 1601, 1727
DpnI	GATC	7 cut(s)	69, 188, 201, 498, 691, 963, 1147
DpnII	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
Eam1104I	CTCTTC	1 cut(s)	7
EarI	CTCTTC	1 cut(s)	7
Ecl136II	GAGCTC	2 cut(s)	818, 1493
Eco130I	CCWWGG	3 cut(s)	122, 877, 1439
Eco147I	AGGCCT	2 cut(s)	796, 1725
Eco24I	GRGCYC	2 cut(s)	820, 1495
Eco31I	GGTCTC	2 cut(s)	9, 389
Eco47I	GGWCC	1 cut(s)	1436
Eco53kI	GAGCTC	2 cut(s)	818, 1493
Eco57I	CTGAAG	2 cut(s)	513, 974
EcoICRI	GAGCTC	2 cut(s)	818, 1493
EcoNI	CCTNNNNNAGG	2 cut(s)	801, 1588
EcoO109I	RGGNCCY	1 cut(s)	1251
EcoRII	CCWGG	3 cut(s)	685, 838, 1716
EcoT14I	CCWWGG	3 cut(s)	122, 877, 1439
EcoT22I	ATGCAT	1 cut(s)	766
EcoT38I	GRGCYC	2 cut(s)	820, 1495
ErhI	CCWWGG	3 cut(s)	122, 877, 1439
FalI	AAGNNNNNCTT	2 cut(s)	1393, 1425
FaqI	GGGAC	2 cut(s)	362, 992
FblI	GTMKAC	1 cut(s)	1560
Fnu4HI	GCNGC	5 cut(s)	603, 654, 1140, 1407, 1598
FokI	GGATG	9 cut(s)	518, 521, 625, 793, 824, 895, 1089, 1268, 1675
FriOI	GRGCYC	2 cut(s)	820, 1495
Fsp4HI	GCNGC	5 cut(s)	603, 654, 1140, 1407, 1598
FspBI	CTAG	5 cut(s)	59, 230, 522, 1332, 1440
GluI	GCNGC	5 cut(s)	603, 654, 1140, 1407, 1598
GsaI	CCCAGC	1 cut(s)	1022
HaeIII	GGCC	4 cut(s)	624, 796, 1253, 1725
HincII	GTYRAC	1 cut(s)	1680
HindII	GTYRAC	1 cut(s)	1680
HindIII	AAGCTT	1 cut(s)	647
HinfI	GANTC	4 cut(s)	412, 709, 1304, 1569
HphI	GGTGA	4 cut(s)	346, 404, 812, 827
Hpy166II	GTNNAC	2 cut(s)	1561, 1680
Hpy188I	TCNGA	7 cut(s)	191, 204, 284, 417, 954, 968, 1262
Hpy188III	TCNNGA	5 cut(s)	104, 409, 482, 706, 1645
Hpy8I	GTNNAC	2 cut(s)	1561, 1680
HpyAV	CCTTC	7 cut(s)	22, 250, 766, 778, 1395, 1417, 1706
HpyCH4III	ACNGT	6 cut(s)	196, 722, 986, 1067, 1156, 1242
HpyCH4IV	ACGT	1 cut(s)	567
HpyF10VI	GCNNNNNNNGC	5 cut(s)	599, 1015, 1123, 1631, 1722
HpyF3I	CTNAG	6 cut(s)	23, 213, 909, 965, 1601, 1727
HpySE526I	ACGT	1 cut(s)	567
Kzo9I	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
LmnI	GCTCC	2 cut(s)	815, 1671
Lsp1109I	GCAGC	5 cut(s)	589, 640, 1126, 1393, 1609
LweI	GCATC	4 cut(s)	540, 841, 859, 1111
MaeI	CTAG	5 cut(s)	59, 230, 522, 1332, 1440
MaeII	ACGT	1 cut(s)	567
MaeIII	GTNAC	2 cut(s)	986, 1477
MalI	GATC	7 cut(s)	69, 188, 201, 498, 691, 963, 1147
MboI	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
MboII	GAAGA	8 cut(s)	24, 196, 334, 337, 506, 562, 1235, 1375
MfeI	CAATTG	1 cut(s)	251
MflI	RGATCY	3 cut(s)	496, 689, 961
MhlI	GDGCHC	3 cut(s)	820, 1059, 1495
MluCI	AATT	9 cut(s)	137, 241, 251, 337, 514, 891, 1312, 1508, 1521
MlyI	GAGTC	4 cut(s)	406, 703, 1313, 1563
MmeI	TCCRAC	3 cut(s)	543, 758, 1338
Mph1103I	ATGCAT	1 cut(s)	766
MroXI	GAANNNNTTC	1 cut(s)	554
MseI	TTAA	9 cut(s)	72, 174, 851, 890, 1119, 1311, 1446, 1565, 1706
MslI	CAYNNNNRTG	3 cut(s)	995, 1213, 1500
MspA1I	CMGCKG	1 cut(s)	1126
MspCI	CTTAAG	2 cut(s)	173, 1564
MspR9I	CCNGG	3 cut(s)	687, 840, 1718
MunI	CAATTG	1 cut(s)	251
Mva1269I	GAATGC	3 cut(s)	233, 1141, 1396
MvaI	CCWGG	3 cut(s)	687, 840, 1718
MwoI	GCNNNNNNNGC	5 cut(s)	599, 1015, 1123, 1631, 1722
NcoI	CCATGG	1 cut(s)	877
NdeII	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
NlaIV	GGNNCC	4 cut(s)	691, 941, 1076, 1673
NsiI	ATGCAT	1 cut(s)	766
NspI	RCATGY	5 cut(s)	764, 768, 1485, 1556, 1581
PaeI	GCATGC	3 cut(s)	764, 768, 1556
PaqCI	CACCTGC	1 cut(s)	1592
PceI	AGGCCT	2 cut(s)	796, 1725
PctI	GAATGC	3 cut(s)	233, 1141, 1396
PdmI	GAANNNNTTC	1 cut(s)	554
PkrI	GCNGC	5 cut(s)	604, 655, 1141, 1408, 1599
PleI	GAGTC	4 cut(s)	406, 703, 1312, 1563
PpsI	GAGTC	4 cut(s)	406, 703, 1312, 1563
Psp124BI	GAGCTC	2 cut(s)	820, 1495
Psp6I	CCWGG	3 cut(s)	685, 838, 1716
PspFI	CCCAGC	1 cut(s)	1018
PspGI	CCWGG	3 cut(s)	685, 838, 1716
PspN4I	GGNNCC	4 cut(s)	691, 941, 1076, 1673
PspPI	GGNCC	3 cut(s)	622, 1251, 1436
PstI	CTGCAG	1 cut(s)	437
PsuI	RGATCY	3 cut(s)	496, 689, 961
PvuII	CAGCTG	1 cut(s)	1126
RsaI	GTAC	3 cut(s)	641, 749, 1153
RsaNI	GTAC	3 cut(s)	640, 748, 1152
RseI	CAYNNNNRTG	3 cut(s)	995, 1213, 1500
SacI	GAGCTC	2 cut(s)	820, 1495
SaqAI	TTAA	9 cut(s)	72, 174, 851, 890, 1119, 1311, 1446, 1565, 1706
SatI	GCNGC	5 cut(s)	603, 654, 1140, 1407, 1598
Sau3AI	GATC	7 cut(s)	67, 186, 199, 496, 689, 961, 1145
Sau96I	GGNCC	3 cut(s)	622, 1251, 1436
ScaI	AGTACT	1 cut(s)	1153
SchI	GAGTC	4 cut(s)	406, 703, 1313, 1563
ScrFI	CCNGG	3 cut(s)	687, 840, 1718
SduI	GDGCHC	3 cut(s)	820, 1059, 1495
SfaNI	GCATC	4 cut(s)	540, 841, 859, 1111
SfcI	CTRYAG	3 cut(s)	433, 1486, 1557
SinI	GGWCC	1 cut(s)	1436
SmiMI	CAYNNNNRTG	3 cut(s)	995, 1213, 1500
SmlI	CTYRAG	3 cut(s)	173, 480, 1564
SmoI	CTYRAG	3 cut(s)	173, 480, 1564
SphI	GCATGC	3 cut(s)	764, 768, 1556
Sse9I	AATT	9 cut(s)	137, 241, 251, 337, 514, 891, 1312, 1508, 1521
SseBI	AGGCCT	2 cut(s)	796, 1725
SspMI	CTAG	5 cut(s)	59, 230, 522, 1332, 1440
SstI	GAGCTC	2 cut(s)	820, 1495
StuI	AGGCCT	2 cut(s)	796, 1725
StyD4I	CCNGG	3 cut(s)	685, 838, 1716
StyI	CCWWGG	3 cut(s)	122, 877, 1439
TaaI	ACNGT	6 cut(s)	196, 722, 986, 1067, 1156, 1242
TaiI	ACGT	1 cut(s)	570
TasI	AATT	9 cut(s)	137, 241, 251, 337, 514, 891, 1312, 1508, 1521
TatI	WGTACW	2 cut(s)	639, 1151
Tru1I	TTAA	9 cut(s)	72, 174, 851, 890, 1119, 1311, 1446, 1565, 1706
Tru9I	TTAA	9 cut(s)	72, 174, 851, 890, 1119, 1311, 1446, 1565, 1706
TscAI	CASTG	4 cut(s)	447, 1070, 1247, 1609
TseI	GCWGC	5 cut(s)	602, 653, 1139, 1406, 1597
TspDTI	ATGAA	4 cut(s)	145, 303, 629, 797
TspRI	CASTG	4 cut(s)	447, 1070, 1247, 1609
Vha464I	CTTAAG	2 cut(s)	173, 1564
VpaK11BI	GGWCC	1 cut(s)	1436
XagI	CCTNNNNNAGG	2 cut(s)	801, 1588
XapI	RAATTY	3 cut(s)	137, 241, 1508
XceI	RCATGY	5 cut(s)	764, 768, 1485, 1556, 1581
XmaJI	CCTAGG	1 cut(s)	1439
XmiI	GTMKAC	1 cut(s)	1560
XmnI	GAANNNNTTC	1 cut(s)	554
XspI	CTAG	5 cut(s)	59, 230, 522, 1332, 1440
ZrmI	AGTACT	1 cut(s)	1153
Zsp2I	ATGCAT	1 cut(s)	766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.