RLG00000006693

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
9684412 .. 9692808
8397 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006693

Sequence Viewer

Length: 1479 bp
ATGGAGAAATGTTGTGAGTTCTGCAGAGCATTAAGGCCAGTAGTGTACTGTAAAGCTGATGCAGCACATCTTTGCCTATCTTGTGATGCAAAGATCCATTCGGCTAATACAGTTTTCAACCGGCATCAGCGCACTGTCTTATGCGAATCCTGCCAGGGCCACCCTGCTTATGTTCTGTGTTTGGATCACAGAATGTTTATGTGCAATGCCTGTGACAGGAGCCAGCACACGTCGTCTTCCCAACATCATCACAAACGCACTATCCGGAGTTACACAGATTGCCCGTCTGCCAAGGATTTTGCAGCATTGTGGGGTTTCCAATCAAATGAGATAGATAACAAGACTCTATCCACCTCTTGTGGATCTTGTGACTCGAGTGTGGTAAGCTATGATATTCATGGGCAGTCTTGCTCACAAATTGAATGTCTTTCAGGTGGTGCTCAGTTTGAAATGGGATCGACCAGTAAACAATACGAGAGTAAAGGTGAAGAGCATAAGAAGACTGGTTTTATTCTGCACCAGATACTTGACTTGGAAAGGCTGCAGCTAGCCAAAGGGAATAGCCCTTCAGCACAGAGTGACCTATCTTTTTCAGCACATCATACTTGGAACAGCTTTGATGAGAATCTTGATTGGCATTTACAACATTGCGAGACTACTGGTACTAACTTTCAGCTAAATGAGAGTCCGCTTCAGAATCCGAAAGATGATCCTTTTCCATTTCTATTTTCTCAAGCGGAACATTTACCATCAAATTCAACTATTGGACTTCCATTGCAGACAGAATCCATTTGGCAGTGCAGAAGTCCGGTTCAAAGTAGTCAGCTGTGGTCTCAAAATATGCAAGACCTTGGGGTTTGTGAAGAGCTTGCTTCTCACGACGATTTCAACATACCTGATGTTGATTTGACATTCCGAAATTTCGAGGAACTCTTTGGAGGTGATCAAGATCCTACCAGATTGCTGCTTGATGATAAAGATGTCTCATATTCCTCCATGAAGAGGGACATGTCCCTCGATAAATCAGATGACTGCAATTCAAGAGCATTAATGGATGTATCAGAGGCTTCATCCATGTACCTTACTCAGCCTGCAGACTTCGACAAAGATACCGGTGCCTGTAACAAAGTTGTAGACGTTTCGGGAAGCATGGATTCGAATTCTCCACATGCTAGTCGACCACCTTTTTCAACTTTACCATTCTCTGAGTCGAGGATATTCACCGTTAGCAACAATGCAGATTGTCATGATACGCAACCCTTGAGCACTTCACCTGATGTGGATGCTGGACAGCTGGAAGTCAGAGCAAGTTCTCGGATGAGGTACAAAGAGAAGAAGCATTCTCGACTAACTGAGAAGAAACTTCCATATCCATCTCGGAAAGCTACAACCAACATACATAAGCTGGGAAAAGGCCGAATTGTTAAGACAGAAGAGGAATACGATTCAGACACCATTGATGTGACAAGAAGTTACTGA

Protein Analysis

493

Amino Acids

55.26

Weight (kDa)

5.51

Isoelectric Point (pI)

62.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1115
AccI GTMKAC 2 cut(s) 1134, 1177
AccIII TCCGGA 1 cut(s) 264
AciI CCGC 2 cut(s) 689, 737
AclWI GGATC 6 cut(s) 88, 192, 370, 463, 704, 944
AcsI RAATTY 3 cut(s) 754, 919, 1159
AcuI CTGAAG 2 cut(s) 552, 677
AdeI CACNNNGTG 1 cut(s) 578
AfaI GTAC 4 cut(s) 47, 664, 1079, 1325
AfiI CCNNNNNNNGG 2 cut(s) 216, 1002
AflIII ACRYGT 2 cut(s) 228, 1008
AgeI ACCGGT 1 cut(s) 1112
AgsI TTSAA 8 cut(s) 118, 422, 449, 759, 815, 889, 1041, 1191
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 1 cut(s) 153
Alw21I GWGCWC 2 cut(s) 442, 1268
Alw26I GTCTC 3 cut(s) 647, 837, 988
AlwI GGATC 6 cut(s) 88, 192, 370, 463, 704, 944
Ama87I CYCGRG 1 cut(s) 373
Aor13HI TCCGGA 1 cut(s) 264
AoxI GGCC 3 cut(s) 35, 157, 1414
ApeKI GCWGC 5 cut(s) 62, 302, 541, 544, 964
ApoI RAATTY 3 cut(s) 754, 919, 1159
ArsI GACNNNNNNTTYG 2 cut(s) 409, 441
AseI ATTAAT 1 cut(s) 1049
AsiGI ACCGGT 1 cut(s) 1112
AspLEI GCGC 1 cut(s) 132
AspS9I GGNCC 1 cut(s) 157
AsuHPI GGTGA 4 cut(s) 497, 953, 1213, 1263
AsuII TTCGAA 1 cut(s) 1157
AsuNHI GCTAGC 1 cut(s) 547
AvaI CYCGRG 1 cut(s) 373
BanI GGYRCC 1 cut(s) 1115
BbsI GAAGAC 2 cut(s) 228, 506
Bbv12I GWGCWC 2 cut(s) 442, 1268
BbvI GCAGC 5 cut(s) 74, 314, 528, 556, 951
BccI CCATC 2 cut(s) 757, 1381
BciT130I CCWGG 1 cut(s) 155
BclI TGATCA 1 cut(s) 943
BcoDI GTCTC 3 cut(s) 647, 837, 988
BfaI CTAG 2 cut(s) 548, 1173
BfmI CTRYAG 3 cut(s) 22, 542, 1092
BisI GCNGC 5 cut(s) 63, 303, 542, 545, 965
BlsI GCNGC 5 cut(s) 64, 304, 543, 546, 966
Bme1390I CCNGG 1 cut(s) 155
BmeT110I CYCGRG 1 cut(s) 373
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 1 cut(s) 157
BmiI GGNNCC 2 cut(s) 221, 1117
BmrFI CCNGG 1 cut(s) 155
BmsI GCATC 4 cut(s) 49, 76, 133, 1273
BmtI GCTAGC 1 cut(s) 551
BpiI GAAGAC 2 cut(s) 228, 506
Bpu14I TTCGAA 1 cut(s) 1157
BpuEI CTTGAG 2 cut(s) 717, 1282
BsaBI GATNNNNATC 2 cut(s) 624, 948
BsaI GGTCTC 1 cut(s) 837
BsaJI CCNNGG 3 cut(s) 154, 291, 850
BsaWI WCCGGW 3 cut(s) 264, 808, 1112
Bsc4I CCNNNNNNNGG 2 cut(s) 216, 1002
Bse118I RCCGGY 2 cut(s) 120, 1112
Bse1I ACTGG 4 cut(s) 38, 462, 508, 664
Bse3DI GCAATG 3 cut(s) 211, 646, 773
Bse8I GATNNNNATC 2 cut(s) 624, 948
BseAI TCCGGA 1 cut(s) 264
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 3 cut(s) 154, 291, 850
BseGI GGATG 4 cut(s) 1060, 1070, 1288, 1323
BseJI GATNNNNATC 2 cut(s) 624, 948
BseLI CCNNNNNNNGG 2 cut(s) 216, 1002
BseMI GCAATG 3 cut(s) 211, 646, 773
BseMII CTCAG 4 cut(s) 455, 1100, 1197, 1344
BseNI ACTGG 4 cut(s) 38, 462, 508, 664
BseXI GCAGC 5 cut(s) 74, 314, 528, 556, 951
BseYI CCCAGC 1 cut(s) 1405
BsgI GTGCAG 2 cut(s) 500, 820
BshFI GGCC 3 cut(s) 37, 159, 1416
BshNI GGYRCC 1 cut(s) 1115
BshTI ACCGGT 1 cut(s) 1112
BsiHKAI GWGCWC 2 cut(s) 442, 1268
BsiHKCI CYCGRG 1 cut(s) 373
BsiSI CCGG 4 cut(s) 121, 265, 809, 1113
BslFI GGGAC 2 cut(s) 997, 1019
BslI CCNNNNNNNGG 2 cut(s) 216, 1002
BsmAI GTCTC 3 cut(s) 647, 837, 988
BsmFI GGGAC 2 cut(s) 997, 1019
BsmI GAATGC 1 cut(s) 1339
BsnI GGCC 3 cut(s) 37, 159, 1416
Bso31I GGTCTC 1 cut(s) 837
BsoBI CYCGRG 1 cut(s) 373
Bsp119I TTCGAA 1 cut(s) 1157
Bsp1286I GDGCHC 2 cut(s) 442, 1268
Bsp13I TCCGGA 1 cut(s) 264
Bsp143I GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
BspACI CCGC 2 cut(s) 689, 737
BspANI GGCC 3 cut(s) 37, 159, 1416
BspCNI CTCAG 4 cut(s) 454, 1099, 1198, 1345
BspEI TCCGGA 1 cut(s) 264
BspHI TCATGA 1 cut(s) 1246
BspLI GGNNCC 2 cut(s) 221, 1117
BspMAI CTGCAG 3 cut(s) 26, 546, 1096
BspOI GCTAGC 1 cut(s) 551
BspPI GGATC 6 cut(s) 88, 192, 370, 463, 704, 944
BspQI GCTCTTC 2 cut(s) 483, 858
BspT104I TTCGAA 1 cut(s) 1157
BspT107I GGYRCC 1 cut(s) 1115
BspTNI GGTCTC 1 cut(s) 837
BsrDI GCAATG 3 cut(s) 211, 646, 773
BsrFI RCCGGY 2 cut(s) 120, 1112
BsrI ACTGG 4 cut(s) 38, 462, 508, 664
BssAI RCCGGY 2 cut(s) 120, 1112
BssECI CCNNGG 3 cut(s) 154, 291, 850
BssMI GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
BssT1I CCWWGG 2 cut(s) 291, 850
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 4 cut(s) 50, 112, 136, 1225
Bst6I CTCTTC 4 cut(s) 483, 858, 995, 1428
BstBI TTCGAA 1 cut(s) 1157
BstC8I GCNNGC 4 cut(s) 224, 549, 870, 1092
BstDEI CTNAG 4 cut(s) 441, 1086, 1206, 1353
BstENI CCTNNNNNAGG 1 cut(s) 214
BstF5I GGATG 4 cut(s) 1060, 1070, 1288, 1323
BstHHI GCGC 1 cut(s) 132
BstKTI GATC 7 cut(s) 96, 187, 365, 458, 712, 946, 952
BstMAI GTCTC 3 cut(s) 647, 837, 988
BstMBI GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
BstMWI GCNNNNNNNGC 2 cut(s) 62, 150
BstNI CCWGG 1 cut(s) 155
BstNSI RCATGY 2 cut(s) 1012, 1172
BstSCI CCNGG 1 cut(s) 153
BstSFI CTRYAG 3 cut(s) 22, 542, 1092
BstV1I GCAGC 5 cut(s) 74, 314, 528, 556, 951
BstV2I GAAGAC 2 cut(s) 228, 506
BstX2I RGATCY 3 cut(s) 93, 362, 949
BstYI RGATCY 3 cut(s) 93, 362, 949
BsuRI GGCC 3 cut(s) 37, 159, 1416
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 4 cut(s) 1060, 1070, 1288, 1323
BtsI GCAGTG 1 cut(s) 803
BtsIMutI CAGTG 2 cut(s) 132, 803
Cac8I GCNNGC 4 cut(s) 224, 549, 870, 1092
CciI TCATGA 1 cut(s) 1246
CfoI GCGC 1 cut(s) 132
Cfr10I RCCGGY 2 cut(s) 120, 1112
Cfr13I GGNCC 1 cut(s) 157
Csp6I GTAC 4 cut(s) 46, 663, 1078, 1324
CspAI ACCGGT 1 cut(s) 1112
CviAII CATG 7 cut(s) 398, 997, 1009, 1075, 1150, 1169, 1247
CviQI GTAC 4 cut(s) 46, 663, 1078, 1324
DdeI CTNAG 4 cut(s) 441, 1086, 1206, 1353
DpnI GATC 7 cut(s) 95, 186, 364, 457, 711, 945, 951
DpnII GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
DraIII CACNNNGTG 1 cut(s) 578
Eam1104I CTCTTC 4 cut(s) 483, 858, 995, 1428
EarI CTCTTC 4 cut(s) 483, 858, 995, 1428
Eco130I CCWWGG 2 cut(s) 291, 850
Eco31I GGTCTC 1 cut(s) 837
Eco57I CTGAAG 2 cut(s) 552, 677
Eco88I CYCGRG 1 cut(s) 373
EcoNI CCTNNNNNAGG 1 cut(s) 214
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 2 cut(s) 291, 850
ErhI CCWWGG 2 cut(s) 291, 850
FaeI CATG 7 cut(s) 401, 1000, 1012, 1078, 1153, 1172, 1250
FaqI GGGAC 2 cut(s) 997, 1019
FatI CATG 7 cut(s) 397, 996, 1008, 1074, 1149, 1168, 1246
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 2 cut(s) 1134, 1177
Fnu4HI GCNGC 5 cut(s) 63, 303, 542, 545, 965
FokI GGATG 4 cut(s) 1057, 1067, 1295, 1330
Fsp4HI GCNGC 5 cut(s) 63, 303, 542, 545, 965
FspBI CTAG 2 cut(s) 548, 1173
GlaI GCGC 1 cut(s) 131
GluI GCNGC 5 cut(s) 63, 303, 542, 545, 965
GsaI CCCAGC 1 cut(s) 1409
HaeIII GGCC 3 cut(s) 37, 159, 1416
HapII CCGG 4 cut(s) 121, 265, 809, 1113
HhaI GCGC 1 cut(s) 132
Hin1II CATG 7 cut(s) 401, 1000, 1012, 1078, 1153, 1172, 1250
Hin6I GCGC 1 cut(s) 130
HinP1I GCGC 1 cut(s) 130
HincII GTYRAC 1 cut(s) 1178
HindII GTYRAC 1 cut(s) 1178
HpaII CCGG 4 cut(s) 121, 265, 809, 1113
HphI GGTGA 4 cut(s) 497, 953, 1213, 1263
Hpy166II GTNNAC 4 cut(s) 46, 467, 1135, 1178
Hpy188III TCNNGA 8 cut(s) 265, 629, 878, 947, 1041, 1143, 1247, 1344
Hpy8I GTNNAC 4 cut(s) 46, 467, 1135, 1178
Hpy99I CGWCG 2 cut(s) 235, 884
HpyAV CCTTC 1 cut(s) 576
HpyCH4III ACNGT 4 cut(s) 50, 112, 136, 1225
HpyCH4IV ACGT 2 cut(s) 230, 1137
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 150
HpyF3I CTNAG 4 cut(s) 441, 1086, 1206, 1353
HpySE526I ACGT 2 cut(s) 230, 1137
Hsp92II CATG 7 cut(s) 401, 1000, 1012, 1078, 1153, 1172, 1250
HspAI GCGC 1 cut(s) 130
Kpn2I TCCGGA 1 cut(s) 264
Ksp22I TGATCA 1 cut(s) 943
Kzo9I GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
LguI GCTCTTC 2 cut(s) 483, 858
LmnI GCTCC 1 cut(s) 219
Lsp1109I GCAGC 5 cut(s) 74, 314, 528, 556, 951
LweI GCATC 4 cut(s) 49, 76, 133, 1273
MaeI CTAG 2 cut(s) 548, 1173
MaeII ACGT 2 cut(s) 230, 1137
MaeIII GTNAC 7 cut(s) 212, 269, 368, 578, 1121, 1462, 1472
MalI GATC 7 cut(s) 95, 186, 364, 457, 711, 945, 951
MboI GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
MboII GAAGA 8 cut(s) 228, 500, 511, 875, 1012, 1345, 1369, 1445
MflI RGATCY 3 cut(s) 93, 362, 949
MhlI GDGCHC 2 cut(s) 442, 1268
MluCI AATT 6 cut(s) 417, 754, 919, 1036, 1159, 1419
MlyI GAGTC 4 cut(s) 337, 365, 694, 1217
MroI TCCGGA 1 cut(s) 264
MseI TTAA 3 cut(s) 32, 1049, 1425
MslI CAYNNNNRTG 1 cut(s) 1460
MspA1I CMGCKG 2 cut(s) 826, 1294
MspI CCGG 4 cut(s) 121, 265, 809, 1113
MspR9I CCNGG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 1339
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 62, 150
NdeII GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
NheI GCTAGC 1 cut(s) 547
NlaIII CATG 7 cut(s) 401, 1000, 1012, 1078, 1153, 1172, 1250
NlaIV GGNNCC 2 cut(s) 221, 1117
NmuCI GTSAC 4 cut(s) 212, 368, 578, 1462
NspI RCATGY 2 cut(s) 1012, 1172
NspV TTCGAA 1 cut(s) 1157
PaeR7I CTCGAG 1 cut(s) 373
PagI TCATGA 1 cut(s) 1246
PciI ACATGT 1 cut(s) 1008
PciSI GCTCTTC 2 cut(s) 483, 858
PctI GAATGC 1 cut(s) 1339
PfeI GAWTC 6 cut(s) 146, 625, 697, 785, 1154, 1445
PinAI ACCGGT 1 cut(s) 1112
PkrI GCNGC 5 cut(s) 64, 304, 543, 546, 966
PleI GAGTC 4 cut(s) 337, 365, 693, 1216
PpsI GAGTC 4 cut(s) 337, 365, 693, 1216
PscI ACATGT 1 cut(s) 1008
PshBI ATTAAT 1 cut(s) 1049
Psp6I CCWGG 1 cut(s) 153
PspFI CCCAGC 1 cut(s) 1405
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 221, 1117
PspPI GGNCC 1 cut(s) 157
PspXI VCTCGAGB 1 cut(s) 373
PstI CTGCAG 3 cut(s) 26, 546, 1096
PsuI RGATCY 3 cut(s) 93, 362, 949
PvuII CAGCTG 2 cut(s) 826, 1294
RsaI GTAC 4 cut(s) 47, 664, 1079, 1325
RsaNI GTAC 4 cut(s) 46, 663, 1078, 1324
RseI CAYNNNNRTG 1 cut(s) 1460
SalI GTCGAC 1 cut(s) 1176
SapI GCTCTTC 2 cut(s) 483, 858
SaqAI TTAA 3 cut(s) 32, 1049, 1425
SatI GCNGC 5 cut(s) 63, 303, 542, 545, 965
Sau3AI GATC 7 cut(s) 93, 184, 362, 455, 709, 943, 949
Sau96I GGNCC 1 cut(s) 157
SchI GAGTC 4 cut(s) 337, 365, 694, 1217
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 2 cut(s) 442, 1268
SfaNI GCATC 4 cut(s) 49, 76, 133, 1273
SfcI CTRYAG 3 cut(s) 22, 542, 1092
Sfr274I CTCGAG 1 cut(s) 373
SfuI TTCGAA 1 cut(s) 1157
SlaI CTCGAG 1 cut(s) 373
SmiMI CAYNNNNRTG 1 cut(s) 1460
SmlI CTYRAG 3 cut(s) 373, 732, 1261
SmoI CTYRAG 3 cut(s) 373, 732, 1261
Sse9I AATT 6 cut(s) 417, 754, 919, 1036, 1159, 1419
SsiI CCGC 2 cut(s) 689, 737
SspMI CTAG 2 cut(s) 548, 1173
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 2 cut(s) 291, 850
TaaI ACNGT 4 cut(s) 50, 112, 136, 1225
TaiI ACGT 2 cut(s) 233, 1140
TaqI TCGA 9 cut(s) 374, 458, 924, 1017, 1101, 1157, 1177, 1211, 1345
TasI AATT 6 cut(s) 417, 754, 919, 1036, 1159, 1419
TatI WGTACW 1 cut(s) 45
TfiI GAWTC 6 cut(s) 146, 625, 697, 785, 1154, 1445
Tru1I TTAA 3 cut(s) 32, 1049, 1425
Tru9I TTAA 3 cut(s) 32, 1049, 1425
TscAI CASTG 2 cut(s) 139, 803
TseFI GTSAC 4 cut(s) 212, 368, 578, 1462
TseI GCWGC 5 cut(s) 62, 302, 541, 544, 964
Tsp45I GTSAC 4 cut(s) 212, 368, 578, 1462
TspDTI ATGAA 3 cut(s) 386, 1013, 1059
TspRI CASTG 2 cut(s) 139, 803
VspI ATTAAT 1 cut(s) 1049
XagI CCTNNNNNAGG 1 cut(s) 214
XapI RAATTY 3 cut(s) 754, 919, 1159
XceI RCATGY 2 cut(s) 1012, 1172
XhoI CTCGAG 1 cut(s) 373
XmiI GTMKAC 2 cut(s) 1134, 1177
XspI CTAG 2 cut(s) 548, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.