Rh4AG330000

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
64051666 .. 64053912
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG330000.1

Sequence Viewer

Length: 1485 bp
ATGGAGAAATGTTGTGAGTTCTGCAGAGCATTAAGGCCGGTAGTGTACTGTAAAGCTGATGCAGCACATCTTTGCCTCTCTTGTGATGCAAAGATCCATTCGGCTAACACAGTTTTCAACCGGCATCAGCGCACTGTCTTATGCGAATCCTGCCAAGGCCGCCCTGCTTATGTTCAGTGTTTGGATCACAGAATGTTTATGTGCAATGCCTGTGACAGGAGCCAGCACACGTCATCTTCCCAACATCATCACAAACGCACTATCAGGAGTTACACAGATTGCCCGTCTGCCAAGGATTTTGCAGCATTGTGGGGTTTCCAATCAAATGAGATAGATAACAAGACTCTATCCACCTCTTGTGGTTCTTGTGACTCGAGTGTGGTAAGCTATGATATTCATGGGCAGTCTTGCTCACAAATTGAATGTCTTTCAGGTGGTGCTCGGTTTGAAATGGGATCGACCAGTAAACAATACGAGATATATTGTAAAGGTGAAGAGCATAAGAAGACTGGTTTTATTCTGCACCAGATACTTGACTTGGAAAGGCTGCAGCTAGCCAAGGGGAATAGCCCTTCAGCACAGAGTGACCTATCTTCTTCAGCACATCATACTTGGAACAGCTTTGATGAGAATCTTGATTGGCATTTACAACACTGCGAGACTACTGGTACTAACTTTCAGCTAAATGAGAGTCCGCTTCAGAATCCGAAAGATGATCCTTTGCCATTTCTATTTTATCAAGCAGAACATTTACCATCAAATTCAACTATTGGACTTCCATTGCAGACAGAATCCATTTGGCAGTGCAGAAGTCCGGTTCAAAGTAGTCAGCTGTGGTCTCAAAATATGCAAGACCTTGGGGTTTGTGAAGAGCTTGTTTGTCACGACGATTTTGACATACCTGATGTTGATTTGACATTCCGAAATTTCGAGGAACTCTTTGGAGGTGATCAAGATCCTACCAGATTGCTGCTTGATGATAAAGATGTCTCATATTCCTCCATGGAGAGGGACATGTCCCTCGATAAATCAGATGACTGCAATTCAAGAGCAATGGTGGATGTATCAGAGGCTTCATCCATGTACCTTACTCAGCCTGCAGACTTCGACAAAGATACCAGTGCCTGTAACAAAGTTGTAGACGTTTCGGGAAGCATGGATTCGAATTCTCCACATGCTATTCGACCACCTTTTTCAACTTTACCATTCTCTGAGTCGAGGATATTCACCGTTAGCAACAATGCAGATTGTCATGATACGCAACCCTTGAGCACTTCACCTGATGTGGATACTGGACAGCTGGAAGTCGGAGCAAGTTCTCGGATGAGGTACAAAGAGAAGAAGCATTCTCGACTAACTGAGAAGAAACTTCCATATCCATCTCGGAAAGCTACAACTAATATACATAAGCTGGGAAAAGGCCGAATTGTTAAGACAGAAGAGGAATACGATTCAGACACCATTGATGTGACAAGAAGTCACTGA

Protein Analysis

494

Amino Acids

55.59

Weight (kDa)

5.4

Isoelectric Point (pI)

61.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1140
AciI CCGC 2 cut(s) 160, 695
AclWI GGATC 5 cut(s) 88, 192, 463, 710, 950
AcsI RAATTY 3 cut(s) 760, 925, 1165
AcuI CTGAAG 3 cut(s) 558, 582, 683
AdeI CACNNNGTG 1 cut(s) 584
AfaI GTAC 4 cut(s) 47, 670, 1085, 1331
AfiI CCNNNNNNNGG 2 cut(s) 216, 1008
AflIII ACRYGT 2 cut(s) 228, 1014
AgsI TTSAA 7 cut(s) 118, 422, 449, 765, 821, 1047, 1197
AhdI GACNNNNNGTC 1 cut(s) 1476
AjiI CACGTC 1 cut(s) 231
Alw21I GWGCWC 2 cut(s) 442, 1274
Alw26I GTCTC 3 cut(s) 653, 843, 994
AlwI GGATC 5 cut(s) 88, 192, 463, 710, 950
AlwNI CAGNNNCTG 1 cut(s) 1125
Ama87I CYCGRG 1 cut(s) 373
AoxI GGCC 3 cut(s) 35, 157, 1420
ApeKI GCWGC 5 cut(s) 62, 302, 547, 550, 970
ApoI RAATTY 3 cut(s) 760, 925, 1165
ArsI GACNNNNNNTTYG 2 cut(s) 409, 441
AspLEI GCGC 1 cut(s) 132
AsuHPI GGTGA 4 cut(s) 503, 959, 1219, 1269
AsuII TTCGAA 1 cut(s) 1163
AsuNHI GCTAGC 1 cut(s) 553
AvaI CYCGRG 1 cut(s) 373
BbsI GAAGAC 1 cut(s) 512
Bbv12I GWGCWC 2 cut(s) 442, 1274
BbvI GCAGC 5 cut(s) 74, 314, 534, 562, 957
BccI CCATC 2 cut(s) 763, 1387
BciVI GTATCC 1 cut(s) 1282
BclI TGATCA 1 cut(s) 949
BcoDI GTCTC 3 cut(s) 653, 843, 994
BfaI CTAG 1 cut(s) 554
BfmI CTRYAG 3 cut(s) 22, 548, 1098
BfuI GTATCC 1 cut(s) 1282
BisI GCNGC 6 cut(s) 63, 160, 303, 548, 551, 971
BlsI GCNGC 6 cut(s) 64, 161, 304, 549, 552, 972
BmeRI GACNNNNNGTC 1 cut(s) 1476
BmeT110I CYCGRG 1 cut(s) 373
BmgBI CACGTC 1 cut(s) 231
BmiI GGNNCC 1 cut(s) 221
BmsI GCATC 3 cut(s) 49, 76, 133
BmtI GCTAGC 1 cut(s) 557
BpiI GAAGAC 1 cut(s) 512
Bpu14I TTCGAA 1 cut(s) 1163
BpuEI CTTGAG 1 cut(s) 1288
BsaBI GATNNNNATC 2 cut(s) 630, 954
BsaI GGTCTC 1 cut(s) 843
BsaJI CCNNGG 5 cut(s) 154, 291, 558, 856, 1002
BsaWI WCCGGW 1 cut(s) 814
Bsc4I CCNNNNNNNGG 2 cut(s) 216, 1008
Bse118I RCCGGY 2 cut(s) 37, 120
Bse1I ACTGG 5 cut(s) 462, 514, 670, 1119, 1297
Bse3DI GCAATG 3 cut(s) 211, 779, 1059
Bse8I GATNNNNATC 2 cut(s) 630, 954
BseDI CCNNGG 5 cut(s) 154, 291, 558, 856, 1002
BseGI GGATG 3 cut(s) 1066, 1076, 1329
BseJI GATNNNNATC 2 cut(s) 630, 954
BseLI CCNNNNNNNGG 2 cut(s) 216, 1008
BseMI GCAATG 3 cut(s) 211, 779, 1059
BseMII CTCAG 3 cut(s) 1106, 1203, 1350
BseNI ACTGG 5 cut(s) 462, 514, 670, 1119, 1297
BseXI GCAGC 5 cut(s) 74, 314, 534, 562, 957
BseYI CCCAGC 1 cut(s) 1411
BsgI GTGCAG 2 cut(s) 506, 826
BshFI GGCC 3 cut(s) 37, 159, 1422
BsiHKAI GWGCWC 2 cut(s) 442, 1274
BsiHKCI CYCGRG 1 cut(s) 373
BsiSI CCGG 3 cut(s) 38, 121, 815
BslFI GGGAC 2 cut(s) 1003, 1025
BslI CCNNNNNNNGG 2 cut(s) 216, 1008
BsmAI GTCTC 3 cut(s) 653, 843, 994
BsmFI GGGAC 2 cut(s) 1003, 1025
BsmI GAATGC 1 cut(s) 1345
BsnI GGCC 3 cut(s) 37, 159, 1422
Bso31I GGTCTC 1 cut(s) 843
BsoBI CYCGRG 1 cut(s) 373
Bsp119I TTCGAA 1 cut(s) 1163
Bsp1286I GDGCHC 2 cut(s) 442, 1274
Bsp143I GATC 6 cut(s) 93, 184, 455, 715, 949, 955
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 2 cut(s) 160, 695
BspANI GGCC 3 cut(s) 37, 159, 1422
BspCNI CTCAG 3 cut(s) 1105, 1204, 1351
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 1 cut(s) 221
BspMAI CTGCAG 3 cut(s) 26, 552, 1102
BspOI GCTAGC 1 cut(s) 557
BspPI GGATC 5 cut(s) 88, 192, 463, 710, 950
BspQI GCTCTTC 2 cut(s) 489, 864
BspT104I TTCGAA 1 cut(s) 1163
BspTNI GGTCTC 1 cut(s) 843
BsrDI GCAATG 3 cut(s) 211, 779, 1059
BsrFI RCCGGY 2 cut(s) 37, 120
BsrI ACTGG 5 cut(s) 462, 514, 670, 1119, 1297
BssAI RCCGGY 2 cut(s) 37, 120
BssECI CCNNGG 5 cut(s) 154, 291, 558, 856, 1002
BssMI GATC 6 cut(s) 93, 184, 455, 715, 949, 955
BssT1I CCWWGG 5 cut(s) 154, 291, 558, 856, 1002
Bst4CI ACNGT 4 cut(s) 50, 112, 136, 1231
Bst6I CTCTTC 3 cut(s) 489, 864, 1434
BstBI TTCGAA 1 cut(s) 1163
BstC8I GCNNGC 3 cut(s) 224, 555, 1098
BstDEI CTNAG 3 cut(s) 1092, 1212, 1359
BstDSI CCRYGG 1 cut(s) 1002
BstENI CCTNNNNNAGG 1 cut(s) 214
BstF5I GGATG 3 cut(s) 1066, 1076, 1329
BstHHI GCGC 1 cut(s) 132
BstKTI GATC 6 cut(s) 96, 187, 458, 718, 952, 958
BstMAI GTCTC 3 cut(s) 653, 843, 994
BstMBI GATC 6 cut(s) 93, 184, 455, 715, 949, 955
BstMWI GCNNNNNNNGC 3 cut(s) 62, 150, 159
BstNSI RCATGY 2 cut(s) 1018, 1178
BstSFI CTRYAG 3 cut(s) 22, 548, 1098
BstV1I GCAGC 5 cut(s) 74, 314, 534, 562, 957
BstV2I GAAGAC 1 cut(s) 512
BstX2I RGATCY 2 cut(s) 93, 955
BstYI RGATCY 2 cut(s) 93, 955
BsuI GTATCC 1 cut(s) 1282
BsuRI GGCC 3 cut(s) 37, 159, 1422
BtgI CCRYGG 1 cut(s) 1002
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 3 cut(s) 1066, 1076, 1329
BtsI GCAGTG 2 cut(s) 652, 809
BtsIMutI CAGTG 6 cut(s) 132, 182, 652, 809, 1126, 1480
Cac8I GCNNGC 3 cut(s) 224, 555, 1098
CaiI CAGNNNCTG 1 cut(s) 1125
CciI TCATGA 1 cut(s) 1252
CfoI GCGC 1 cut(s) 132
Cfr10I RCCGGY 2 cut(s) 37, 120
Csp6I GTAC 4 cut(s) 46, 669, 1084, 1330
CviAII CATG 7 cut(s) 398, 1003, 1015, 1081, 1156, 1175, 1253
CviQI GTAC 4 cut(s) 46, 669, 1084, 1330
DdeI CTNAG 3 cut(s) 1092, 1212, 1359
DpnI GATC 6 cut(s) 95, 186, 457, 717, 951, 957
DpnII GATC 6 cut(s) 93, 184, 455, 715, 949, 955
DraIII CACNNNGTG 1 cut(s) 584
DriI GACNNNNNGTC 1 cut(s) 1476
Eam1104I CTCTTC 3 cut(s) 489, 864, 1434
Eam1105I GACNNNNNGTC 1 cut(s) 1476
EarI CTCTTC 3 cut(s) 489, 864, 1434
Eco130I CCWWGG 5 cut(s) 154, 291, 558, 856, 1002
Eco31I GGTCTC 1 cut(s) 843
Eco57I CTGAAG 3 cut(s) 558, 582, 683
Eco88I CYCGRG 1 cut(s) 373
EcoNI CCTNNNNNAGG 1 cut(s) 214
EcoRI GAATTC 1 cut(s) 1165
EcoT14I CCWWGG 5 cut(s) 154, 291, 558, 856, 1002
ErhI CCWWGG 5 cut(s) 154, 291, 558, 856, 1002
FaeI CATG 7 cut(s) 401, 1006, 1018, 1084, 1159, 1178, 1256
FaqI GGGAC 2 cut(s) 1003, 1025
FatI CATG 7 cut(s) 397, 1002, 1014, 1080, 1155, 1174, 1252
FbaI TGATCA 1 cut(s) 949
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 6 cut(s) 63, 160, 303, 548, 551, 971
FokI GGATG 3 cut(s) 1063, 1073, 1336
Fsp4HI GCNGC 6 cut(s) 63, 160, 303, 548, 551, 971
FspBI CTAG 1 cut(s) 554
GlaI GCGC 1 cut(s) 131
GluI GCNGC 6 cut(s) 63, 160, 303, 548, 551, 971
GsaI CCCAGC 1 cut(s) 1415
HaeIII GGCC 3 cut(s) 37, 159, 1422
HapII CCGG 3 cut(s) 38, 121, 815
HhaI GCGC 1 cut(s) 132
Hin1II CATG 7 cut(s) 401, 1006, 1018, 1084, 1159, 1178, 1256
Hin6I GCGC 1 cut(s) 130
HinP1I GCGC 1 cut(s) 130
HpaII CCGG 3 cut(s) 38, 121, 815
HphI GGTGA 4 cut(s) 503, 959, 1219, 1269
Hpy166II GTNNAC 3 cut(s) 46, 467, 1141
Hpy188III TCNNGA 8 cut(s) 265, 635, 884, 953, 1047, 1149, 1253, 1350
Hpy8I GTNNAC 3 cut(s) 46, 467, 1141
Hpy99I CGWCG 1 cut(s) 890
HpyAV CCTTC 1 cut(s) 582
HpyCH4III ACNGT 4 cut(s) 50, 112, 136, 1231
HpyCH4IV ACGT 2 cut(s) 230, 1143
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 150, 159
HpyF3I CTNAG 3 cut(s) 1092, 1212, 1359
HpySE526I ACGT 2 cut(s) 230, 1143
Hsp92II CATG 7 cut(s) 401, 1006, 1018, 1084, 1159, 1178, 1256
HspAI GCGC 1 cut(s) 130
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 6 cut(s) 93, 184, 455, 715, 949, 955
LguI GCTCTTC 2 cut(s) 489, 864
LmnI GCTCC 2 cut(s) 219, 1310
Lsp1109I GCAGC 5 cut(s) 74, 314, 534, 562, 957
LweI GCATC 3 cut(s) 49, 76, 133
MaeI CTAG 1 cut(s) 554
MaeII ACGT 2 cut(s) 230, 1143
MaeIII GTNAC 8 cut(s) 212, 269, 368, 584, 881, 1127, 1468, 1478
MalI GATC 6 cut(s) 95, 186, 457, 717, 951, 957
MboI GATC 6 cut(s) 93, 184, 455, 715, 949, 955
MboII GAAGA 9 cut(s) 228, 506, 517, 585, 588, 881, 1351, 1375, 1451
MflI RGATCY 2 cut(s) 93, 955
MhlI GDGCHC 2 cut(s) 442, 1274
MluCI AATT 6 cut(s) 417, 760, 925, 1042, 1165, 1425
MlyI GAGTC 4 cut(s) 337, 365, 700, 1223
MmeI TCCRAC 1 cut(s) 1288
MseI TTAA 2 cut(s) 32, 1431
MslI CAYNNNNRTG 1 cut(s) 1466
MspA1I CMGCKG 2 cut(s) 832, 1300
MspI CCGG 3 cut(s) 38, 121, 815
Mva1269I GAATGC 1 cut(s) 1345
MwoI GCNNNNNNNGC 3 cut(s) 62, 150, 159
NcoI CCATGG 1 cut(s) 1002
NdeII GATC 6 cut(s) 93, 184, 455, 715, 949, 955
NheI GCTAGC 1 cut(s) 553
NlaIII CATG 7 cut(s) 401, 1006, 1018, 1084, 1159, 1178, 1256
NlaIV GGNNCC 1 cut(s) 221
NmuCI GTSAC 6 cut(s) 212, 368, 584, 881, 1468, 1478
NspI RCATGY 2 cut(s) 1018, 1178
NspV TTCGAA 1 cut(s) 1163
PaeR7I CTCGAG 1 cut(s) 373
PagI TCATGA 1 cut(s) 1252
PciI ACATGT 1 cut(s) 1014
PciSI GCTCTTC 2 cut(s) 489, 864
PctI GAATGC 1 cut(s) 1345
PfeI GAWTC 6 cut(s) 146, 631, 703, 791, 1160, 1451
PkrI GCNGC 6 cut(s) 64, 161, 304, 549, 552, 972
PleI GAGTC 4 cut(s) 337, 365, 699, 1222
PpsI GAGTC 4 cut(s) 337, 365, 699, 1222
PscI ACATGT 1 cut(s) 1014
PspFI CCCAGC 1 cut(s) 1411
PspN4I GGNNCC 1 cut(s) 221
PspXI VCTCGAGB 1 cut(s) 373
PstI CTGCAG 3 cut(s) 26, 552, 1102
PstNI CAGNNNCTG 1 cut(s) 1125
PsuI RGATCY 2 cut(s) 93, 955
PvuII CAGCTG 2 cut(s) 832, 1300
RsaI GTAC 4 cut(s) 47, 670, 1085, 1331
RsaNI GTAC 4 cut(s) 46, 669, 1084, 1330
RseI CAYNNNNRTG 1 cut(s) 1466
SapI GCTCTTC 2 cut(s) 489, 864
SaqAI TTAA 2 cut(s) 32, 1431
SatI GCNGC 6 cut(s) 63, 160, 303, 548, 551, 971
Sau3AI GATC 6 cut(s) 93, 184, 455, 715, 949, 955
SchI GAGTC 4 cut(s) 337, 365, 700, 1223
SduI GDGCHC 2 cut(s) 442, 1274
SfaNI GCATC 3 cut(s) 49, 76, 133
SfcI CTRYAG 3 cut(s) 22, 548, 1098
Sfr274I CTCGAG 1 cut(s) 373
SfuI TTCGAA 1 cut(s) 1163
SlaI CTCGAG 1 cut(s) 373
SmiMI CAYNNNNRTG 1 cut(s) 1466
SmlI CTYRAG 2 cut(s) 373, 1267
SmoI CTYRAG 2 cut(s) 373, 1267
Sse9I AATT 6 cut(s) 417, 760, 925, 1042, 1165, 1425
SsiI CCGC 2 cut(s) 160, 695
SspMI CTAG 1 cut(s) 554
StyI CCWWGG 5 cut(s) 154, 291, 558, 856, 1002
TaaI ACNGT 4 cut(s) 50, 112, 136, 1231
TaiI ACGT 2 cut(s) 233, 1146
TaqI TCGA 9 cut(s) 374, 458, 930, 1023, 1107, 1163, 1183, 1217, 1351
TasI AATT 6 cut(s) 417, 760, 925, 1042, 1165, 1425
TatI WGTACW 1 cut(s) 45
TauI GCSGC 1 cut(s) 162
TfiI GAWTC 6 cut(s) 146, 631, 703, 791, 1160, 1451
Tru1I TTAA 2 cut(s) 32, 1431
Tru9I TTAA 2 cut(s) 32, 1431
TscAI CASTG 5 cut(s) 139, 182, 659, 809, 1126
TseFI GTSAC 6 cut(s) 212, 368, 584, 881, 1468, 1478
TseI GCWGC 5 cut(s) 62, 302, 547, 550, 970
Tsp45I GTSAC 6 cut(s) 212, 368, 584, 881, 1468, 1478
TspDTI ATGAA 2 cut(s) 386, 1065
TspRI CASTG 5 cut(s) 139, 182, 659, 809, 1126
XagI CCTNNNNNAGG 1 cut(s) 214
XapI RAATTY 3 cut(s) 760, 925, 1165
XceI RCATGY 2 cut(s) 1018, 1178
XhoI CTCGAG 1 cut(s) 373
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.