Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002199

Physical Location & Seq

Genomic Coordinates Forward (+)

30766317 .. 30768710

Gene Structure 2394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G320800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 897 bp

ATGTCATTTACAATCTTCCAACCCGCTTCGGTGCCCCTCCTCCACTCCCATGCGCACCTTAGCTCACCCCTCCCTCCCATGTCTATCTTACGCCGCCTCAACCCCAACCACCTAAAACTAAAACTACGCCGCCACCGCTTCGCCAGTGTCGCCGCCGCAGTACGCCAGGACACCGCGCTCTGGACCCAAGCCCCACTCTCCGAGATTGAACCAGCGGCCGAGTCGCTCTTCCACGTCCGCATCGACCTGTCCGACGCGCCCGACCTCGCTTCGTCCCACACGCGCGCTGGCCAGTATCTCCAGCTTCGCGTCCCGGACGAGTCCAAACCCTCGTTTCTGGCCATCGCGTCGCCGCCTTCGTTGGCGGCGACAAAGGGCGTGTTCGAGTTCTTGGTGAAGAGCGTGGCGGGGTCCACAGCGGAGCTTCTGTGCAGGCTCAAGAGAGGGGACGTCGTGGAGCTAAGCCAGGCTATGGGGAAAGGCTTCGAGATCGATCGGATCGACCCGCCCGAGAAATACCCGACGGTTCTAATATTCGCCACGGGATCTGGAATAAGTCCAATCCGTTCTCTGATTGAATCGGGGTTTAGCGCCGATACAAGATCTGACGTCAAGCTCTTCTATGGGGCTAGAAACCTCGACAGAATGGCTTATCAGGATAGATTTAAGGACTGGGAATCTTCAGGTGTTGAGATTGTGCCAGTATTATCACAGCCGCATGATGGTTGGACGGGACAAAGTGGTTATGTGCAGGCTGCTTTTTCCAGAGCCAAGCAAATTTATAACCCTCTTTCTACAGGTGCTGTTTTATGTGGGCAGAAGCAGATGACTGAGGAGGTTACCTCAATTCTTATAGCAGATGGAGTCTCCAGTGAAAAAATACTGAAGAATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAD_binding_1

Protein Analysis

299

Amino Acids

32.64

Weight (kDa)

8.48

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15140 AT1G15140 AT1G15140
fragaria_vesca	FvH4_4g26280
malus_domestica	MD13G1031300.v1.1 MD16G1033500.v1.1
prunus_persica	Prupe.1G320800_v2.0.a1
pyrus_communis	pycom13g02740 pycom16g02810
rosa_chinensis	RchiOBHm_Chr2g0114941 RchiOBHm_Chr2g0123901 RchiOBHm_Chr2g0151061 RchiOBHm_Chr4g0433881 RchiOBHm_Chr6g0253871 RchiOBHm_Chr6g0284911 RchiOBHm_Chr7g0204021
rosa_laevigata	RLG00000006720 RLG00000013719 RLG00000029252 RLG00000034168
rosa_multiflora	Rmu_sc0000352.1_g000003 Rmu_sc0001311.1_g000004 Rmu_sc0002503.1_g000009 Rmu_sc0002892.1_g000030 Rmu_sc0004401.1_g000018 Rmu_sc0005802.1_g000017 Rmu_sc0012206.1_g000005 Rmu_sc0018346.1_g000012
rosa_roxburghii	Rroxscaffold_1G00042190 Rroxscaffold_3G00228970 Rroxscaffold_3G00244410 Rroxscaffold_4G00329490 Rroxscaffold_4G00329740 Rroxscaffold_5G00375280
rosa_rugosa	Rorug01G0076300 Rorug04G0272100 Rorug07G0031500
rosa_samantha	Rh2BG316000 Rh2CG609700 Rh4BG334200 Rh4CG350000 Rh5CG508600
rosa_wichuraiana	Rw4G028330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
AatII	GACGTC	2 cut(s)	453, 612
Acc16I	TGCGCA	1 cut(s)	54
AccB1I	GGYRCC	1 cut(s)	31
AccB7I	CCANNNNNTGG	1 cut(s)	472
AccII	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
AclWI	GGATC	2 cut(s)	506, 553
AcoI	YGGCCR	3 cut(s)	216, 289, 339
AcsI	RAATTY	2 cut(s)	777, 889
AcuI	CTGAAG	1 cut(s)	666
AcyI	GRCGYC	2 cut(s)	450, 609
AfaI	GTAC	1 cut(s)	162
AfiI	CCNNNNNNNGG	3 cut(s)	180, 472, 722
AgsI	TTSAA	2 cut(s)	209, 578
AjiI	CACGTC	1 cut(s)	235
AjnI	CCWGG	2 cut(s)	165, 465
AluBI	AGCT	5 cut(s)	63, 304, 424, 460, 616
AluI	AGCT	5 cut(s)	63, 304, 424, 460, 616
Alw26I	GTCTC	1 cut(s)	871
AlwI	GGATC	2 cut(s)	506, 553
AlwNI	CAGNNNCTG	1 cut(s)	803
Ama87I	CYCGRG	1 cut(s)	509
AoxI	GGCC	3 cut(s)	216, 289, 339
ApeKI	GCWGC	1 cut(s)	755
ApoI	RAATTY	2 cut(s)	777, 889
Asp700I	GAANNNNTTC	2 cut(s)	482, 890
AspLEI	GCGC	6 cut(s)	55, 178, 259, 285, 287, 593
AspS9I	GGNCC	2 cut(s)	183, 411
AsuC2I	CCSGG	1 cut(s)	314
AsuHPI	GGTGA	2 cut(s)	57, 406
AvaI	CYCGRG	1 cut(s)	509
AvaII	GGWCC	2 cut(s)	183, 411
BaeGI	GKGCMC	1 cut(s)	36
BalI	TGGCCA	2 cut(s)	291, 341
BanI	GGYRCC	1 cut(s)	31
BbvI	GCAGC	1 cut(s)	742
BccI	CCATC	3 cut(s)	350, 716, 854
BciT130I	CCWGG	2 cut(s)	167, 467
BcnI	CCSGG	1 cut(s)	314
BcoDI	GTCTC	1 cut(s)	871
BfaI	CTAG	1 cut(s)	630
BfmI	CTRYAG	1 cut(s)	795
BfoI	RGCGCY	1 cut(s)	594
BglII	AGATCT	1 cut(s)	602
BisI	GCNGC	9 cut(s)	94, 130, 153, 156, 216, 353, 366, 716, 756
BlpI	GCTNAGC	1 cut(s)	461
BlsI	GCNGC	9 cut(s)	95, 131, 154, 157, 217, 354, 367, 717, 757
Bme1390I	CCNGG	3 cut(s)	167, 314, 467
Bme18I	GGWCC	2 cut(s)	183, 411
BmeT110I	CYCGRG	1 cut(s)	509
BmgBI	CACGTC	1 cut(s)	235
BmgT120I	GGNCC	2 cut(s)	183, 411
BmiI	GGNNCC	3 cut(s)	33, 185, 412
BmrFI	CCNGG	3 cut(s)	167, 314, 467
BmrI	ACTGGG	1 cut(s)	682
BmsI	GCATC	1 cut(s)	249
BmuI	ACTGGG	1 cut(s)	682
BplI	GAGNNNNNCTC	2 cut(s)	827, 859
BpmI	CTGGAG	2 cut(s)	284, 853
Bpu10I	CCTNAGC	1 cut(s)	59
Bpu1102I	GCTNAGC	1 cut(s)	461
BpuEI	CTTGAG	1 cut(s)	422
BpuMI	CCSGG	1 cut(s)	314
Bsa29I	ATCGAT	1 cut(s)	492
BsaHI	GRCGYC	2 cut(s)	450, 609
BsaJI	CCNNGG	1 cut(s)	540
BsaXI	ACNNNNNCTCC	2 cut(s)	413, 443
Bsc4I	CCNNNNNNNGG	3 cut(s)	180, 472, 722
Bse1I	ACTGG	5 cut(s)	144, 292, 677, 701, 870
BseBI	CCWGG	2 cut(s)	167, 467
BseCI	ATCGAT	1 cut(s)	492
BseDI	CCNNGG	1 cut(s)	540
BseLI	CCNNNNNNNGG	3 cut(s)	180, 472, 722
BseMII	CTCAG	1 cut(s)	822
BseNI	ACTGG	5 cut(s)	144, 292, 677, 701, 870
BsePI	GCGCGC	1 cut(s)	283
BseRI	GAGGAG	2 cut(s)	29, 848
BseSI	GKGCMC	1 cut(s)	36
BseX3I	CGGCCG	1 cut(s)	216
BseXI	GCAGC	1 cut(s)	742
BsgI	GTGCAG	2 cut(s)	451, 770
Bsh1236I	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
Bsh1285I	CGRYCG	2 cut(s)	219, 496
BshFI	GGCC	3 cut(s)	218, 291, 341
BshNI	GGYRCC	1 cut(s)	31
BshVI	ATCGAT	1 cut(s)	492
BsiEI	CGRYCG	2 cut(s)	219, 496
BsiHKCI	CYCGRG	1 cut(s)	509
BsiSI	CCGG	1 cut(s)	314
BslFI	GGGAC	4 cut(s)	259, 296, 461, 747
BslI	CCNNNNNNNGG	3 cut(s)	180, 472, 722
BsmAI	GTCTC	1 cut(s)	871
BsmFI	GGGAC	4 cut(s)	259, 296, 461, 747
BsnI	GGCC	3 cut(s)	218, 291, 341
BsoBI	CYCGRG	1 cut(s)	509
Bsp1286I	GDGCHC	1 cut(s)	36
Bsp143I	GATC	5 cut(s)	489, 493, 498, 545, 602
Bsp1720I	GCTNAGC	1 cut(s)	461
BspANI	GGCC	3 cut(s)	218, 291, 341
BspCNI	CTCAG	1 cut(s)	823
BspDI	ATCGAT	1 cut(s)	492
BspFNI	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
BspLI	GGNNCC	3 cut(s)	33, 185, 412
BspPI	GGATC	2 cut(s)	506, 553
BspQI	GCTCTTC	3 cut(s)	233, 392, 623
BspT107I	GGYRCC	1 cut(s)	31
BsrI	ACTGG	5 cut(s)	144, 292, 677, 701, 870
BssECI	CCNNGG	1 cut(s)	540
BssHII	GCGCGC	1 cut(s)	283
BssMI	GATC	5 cut(s)	489, 493, 498, 545, 602
BssNI	GRCGYC	2 cut(s)	450, 609
Bst2UI	CCWGG	2 cut(s)	167, 467
Bst4CI	ACNGT	1 cut(s)	526
Bst6I	CTCTTC	3 cut(s)	233, 392, 623
BstACI	GRCGYC	2 cut(s)	450, 609
BstC8I	GCNNGC	4 cut(s)	285, 289, 434, 753
BstDEI	CTNAG	3 cut(s)	59, 461, 831
BstDSI	CCRYGG	1 cut(s)	540
BstEII	GGTNACC	1 cut(s)	838
BstFNI	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
BstH2I	RGCGCY	1 cut(s)	594
BstHHI	GCGC	6 cut(s)	55, 178, 259, 285, 287, 593
BstKTI	GATC	5 cut(s)	492, 496, 501, 548, 605
BstMAI	GTCTC	1 cut(s)	871
BstMBI	GATC	5 cut(s)	489, 493, 498, 545, 602
BstMCI	CGRYCG	2 cut(s)	219, 496
BstMWI	GCNNNNNNNGC	2 cut(s)	135, 149
BstNI	CCWGG	2 cut(s)	167, 467
BstPI	GGTNACC	1 cut(s)	838
BstSCI	CCNGG	3 cut(s)	165, 312, 465
BstSFI	CTRYAG	1 cut(s)	795
BstSLI	GKGCMC	1 cut(s)	36
BstUI	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
BstV1I	GCAGC	1 cut(s)	742
BstX2I	RGATCY	2 cut(s)	545, 602
BstYI	RGATCY	2 cut(s)	545, 602
BstZI	CGGCCG	1 cut(s)	216
Bsu15I	ATCGAT	1 cut(s)	492
BsuRI	GGCC	3 cut(s)	218, 291, 341
BsuTUI	ATCGAT	1 cut(s)	492
BtgI	CCRYGG	1 cut(s)	540
BtgZI	GCGATG	1 cut(s)	328
BtrI	CACGTC	1 cut(s)	235
BtsIMutI	CAGTG	2 cut(s)	151, 877
Cac8I	GCNNGC	4 cut(s)	285, 289, 434, 753
CaiI	CAGNNNCTG	1 cut(s)	803
CfoI	GCGC	6 cut(s)	55, 178, 259, 285, 287, 593
Cfr13I	GGNCC	2 cut(s)	183, 411
ClaI	ATCGAT	1 cut(s)	492
CseI	GACGC	3 cut(s)	263, 298, 336
Csp6I	GTAC	1 cut(s)	161
CviAII	CATG	3 cut(s)	50, 79, 719
CviQI	GTAC	1 cut(s)	161
DdeI	CTNAG	3 cut(s)	59, 461, 831
DpnI	GATC	5 cut(s)	491, 495, 500, 547, 604
DpnII	GATC	5 cut(s)	489, 493, 498, 545, 602
EaeI	YGGCCR	3 cut(s)	216, 289, 339
EagI	CGGCCG	1 cut(s)	216
Eam1104I	CTCTTC	3 cut(s)	233, 392, 623
EarI	CTCTTC	3 cut(s)	233, 392, 623
EclXI	CGGCCG	1 cut(s)	216
Eco47I	GGWCC	2 cut(s)	183, 411
Eco52I	CGGCCG	1 cut(s)	216
Eco57I	CTGAAG	1 cut(s)	666
Eco88I	CYCGRG	1 cut(s)	509
Eco91I	GGTNACC	1 cut(s)	838
EcoO65I	GGTNACC	1 cut(s)	838
EcoRII	CCWGG	2 cut(s)	165, 465
FaeI	CATG	3 cut(s)	53, 82, 722
FaiI	YATR	9 cut(s)	51, 80, 473, 624, 720, 747, 783, 811, 854
FaqI	GGGAC	4 cut(s)	259, 296, 461, 747
FatI	CATG	3 cut(s)	49, 78, 718
FauI	CCCGC	3 cut(s)	31, 400, 513
Fnu4HI	GCNGC	9 cut(s)	94, 130, 153, 156, 216, 353, 366, 716, 756
Fsp4HI	GCNGC	9 cut(s)	94, 130, 153, 156, 216, 353, 366, 716, 756
FspAI	RTGCGCAY	1 cut(s)	54
FspBI	CTAG	1 cut(s)	630
FspI	TGCGCA	1 cut(s)	54
GlaI	GCGC	6 cut(s)	54, 177, 258, 284, 286, 592
GluI	GCNGC	9 cut(s)	94, 130, 153, 156, 216, 353, 366, 716, 756
GsuI	CTGGAG	2 cut(s)	284, 853
HaeII	RGCGCY	1 cut(s)	594
HaeIII	GGCC	3 cut(s)	218, 291, 341
HapII	CCGG	1 cut(s)	314
HgaI	GACGC	3 cut(s)	263, 298, 336
HhaI	GCGC	6 cut(s)	55, 178, 259, 285, 287, 593
Hin1I	GRCGYC	2 cut(s)	450, 609
Hin1II	CATG	3 cut(s)	53, 82, 722
Hin6I	GCGC	6 cut(s)	53, 176, 257, 283, 285, 591
HinP1I	GCGC	6 cut(s)	53, 176, 257, 283, 285, 591
HinfI	GANTC	5 cut(s)	221, 320, 578, 677, 864
HpaII	CCGG	1 cut(s)	314
HphI	GGTGA	2 cut(s)	57, 406
Hpy166II	GTNNAC	1 cut(s)	414
Hpy188I	TCNGA	6 cut(s)	202, 253, 498, 573, 607, 896
Hpy188III	TCNNGA	6 cut(s)	181, 439, 487, 549, 656, 765
Hpy8I	GTNNAC	1 cut(s)	414
Hpy99I	CGWCG	4 cut(s)	257, 352, 455, 526
HpyAV	CCTTC	1 cut(s)	366
HpyCH4III	ACNGT	1 cut(s)	526
HpyCH4IV	ACGT	3 cut(s)	234, 450, 609
HpyCH4V	TGCA	2 cut(s)	432, 751
HpyF10VI	GCNNNNNNNGC	2 cut(s)	135, 149
HpyF3I	CTNAG	3 cut(s)	59, 461, 831
HpySE526I	ACGT	3 cut(s)	234, 450, 609
Hsp92I	GRCGYC	2 cut(s)	450, 609
Hsp92II	CATG	3 cut(s)	53, 82, 722
HspAI	GCGC	6 cut(s)	53, 176, 257, 283, 285, 591
Kzo9I	GATC	5 cut(s)	489, 493, 498, 545, 602
LguI	GCTCTTC	3 cut(s)	233, 392, 623
LmnI	GCTCC	2 cut(s)	421, 457
Lsp1109I	GCAGC	1 cut(s)	742
LweI	GCATC	1 cut(s)	249
MaeI	CTAG	1 cut(s)	630
MaeII	ACGT	3 cut(s)	234, 450, 609
MaeIII	GTNAC	1 cut(s)	838
MalI	GATC	5 cut(s)	491, 495, 500, 547, 604
MboI	GATC	5 cut(s)	489, 493, 498, 545, 602
MboII	GAAGA	5 cut(s)	7, 220, 409, 610, 672
MflI	RGATCY	2 cut(s)	545, 602
MhlI	GDGCHC	1 cut(s)	36
MlsI	TGGCCA	2 cut(s)	291, 341
MluCI	AATT	3 cut(s)	777, 846, 889
MluNI	TGGCCA	2 cut(s)	291, 341
MlyI	GAGTC	3 cut(s)	230, 329, 873
MmeI	TCCRAC	3 cut(s)	43, 276, 707
Mox20I	TGGCCA	2 cut(s)	291, 341
MroXI	GAANNNNTTC	2 cut(s)	482, 890
MscI	TGGCCA	2 cut(s)	291, 341
MseI	TTAA	1 cut(s)	666
MslI	CAYNNNNRTG	1 cut(s)	48
Msp20I	TGGCCA	2 cut(s)	291, 341
MspA1I	CMGCKG	2 cut(s)	215, 419
MspI	CCGG	1 cut(s)	314
MspR9I	CCNGG	3 cut(s)	167, 314, 467
MvaI	CCWGG	2 cut(s)	167, 467
MvnI	CGCG	6 cut(s)	176, 257, 283, 285, 309, 347
MwoI	GCNNNNNNNGC	2 cut(s)	135, 149
NciI	CCSGG	1 cut(s)	314
NdeII	GATC	5 cut(s)	489, 493, 498, 545, 602
NlaIII	CATG	3 cut(s)	53, 82, 722
NlaIV	GGNNCC	3 cut(s)	33, 185, 412
NmeAIII	GCCGAG	1 cut(s)	244
NsbI	TGCGCA	1 cut(s)	54
PauI	GCGCGC	1 cut(s)	283
PciSI	GCTCTTC	3 cut(s)	233, 392, 623
PcsI	WCGNNNNNNNCGW	6 cut(s)	240, 249, 356, 365, 498, 507
PdmI	GAANNNNTTC	2 cut(s)	482, 890
PfeI	GAWTC	2 cut(s)	578, 677
PflMI	CCANNNNNTGG	1 cut(s)	472
PfoI	TCCNGGA	1 cut(s)	312
PkrI	GCNGC	9 cut(s)	95, 131, 154, 157, 217, 354, 367, 717, 757
Ple19I	CGATCG	1 cut(s)	496
PleI	GAGTC	3 cut(s)	229, 328, 872
PpsI	GAGTC	3 cut(s)	229, 328, 872
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	2 cut(s)	165, 465
PspEI	GGTNACC	1 cut(s)	838
PspGI	CCWGG	2 cut(s)	165, 465
PspN4I	GGNNCC	3 cut(s)	33, 185, 412
PspPI	GGNCC	2 cut(s)	183, 411
PstNI	CAGNNNCTG	1 cut(s)	803
PsuI	RGATCY	2 cut(s)	545, 602
PteI	GCGCGC	1 cut(s)	283
PvuI	CGATCG	1 cut(s)	496
RsaI	GTAC	1 cut(s)	162
RsaNI	GTAC	1 cut(s)	161
RseI	CAYNNNNRTG	1 cut(s)	48
SapI	GCTCTTC	3 cut(s)	233, 392, 623
SaqAI	TTAA	1 cut(s)	666
SatI	GCNGC	9 cut(s)	94, 130, 153, 156, 216, 353, 366, 716, 756
Sau3AI	GATC	5 cut(s)	489, 493, 498, 545, 602
Sau96I	GGNCC	2 cut(s)	183, 411
SchI	GAGTC	3 cut(s)	230, 329, 873
ScrFI	CCNGG	3 cut(s)	167, 314, 467
SduI	GDGCHC	1 cut(s)	36
SfaNI	GCATC	1 cut(s)	249
SfcI	CTRYAG	1 cut(s)	795
SinI	GGWCC	2 cut(s)	183, 411
SmiMI	CAYNNNNRTG	1 cut(s)	48
SmlI	CTYRAG	1 cut(s)	437
SmoI	CTYRAG	1 cut(s)	437
Sse9I	AATT	3 cut(s)	777, 846, 889
SspI	AATATT	1 cut(s)	534
SspMI	CTAG	1 cut(s)	630
StyD4I	CCNGG	3 cut(s)	165, 312, 465
TaaI	ACNGT	1 cut(s)	526
TaiI	ACGT	3 cut(s)	237, 453, 612
TaqI	TCGA	6 cut(s)	243, 384, 486, 492, 501, 639
TasI	AATT	3 cut(s)	777, 846, 889
TauI	GCSGC	8 cut(s)	96, 132, 155, 158, 218, 355, 368, 718
TfiI	GAWTC	2 cut(s)	578, 677
Tru1I	TTAA	1 cut(s)	666
Tru9I	TTAA	1 cut(s)	666
TscAI	CASTG	2 cut(s)	151, 877
TseI	GCWGC	1 cut(s)	755
TspGWI	ACGGA	1 cut(s)	554
TspRI	CASTG	2 cut(s)	151, 877
Van91I	CCANNNNNTGG	1 cut(s)	472
VpaK11BI	GGWCC	2 cut(s)	183, 411
XapI	RAATTY	2 cut(s)	777, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	284
XmnI	GAANNNNTTC	2 cut(s)	482, 890
XspI	CTAG	1 cut(s)	630
ZraI	GACGTC	2 cut(s)	451, 610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.