Rmu_sc0002892.1_g000030

Fruit protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002892.1
Physical Location & Seq
Forward (+)
113176 .. 113605
430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002892.1_g000030.1.cds

Sequence Viewer

Length: 249 bp
atggggaaaggcttcgagattgatcagattgagccgctggagaattatcctacggttctaatttttgcaaagggctatggaacaagttcaatcgggtctctcattgaatcagggtttaatgctgataagcgatccgacgtgaagctcttctatggggtcagaaaccttgacaatatggcttatcaggatagattcaaagattgggaagcttcaggtgtaaagagagttcctatattatcacaaccatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

9.22

Weight (kDa)

5.27

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 35
AclWI GGATC 1 cut(s) 126
AcuI CTGAAG 1 cut(s) 195
AgsI TTSAA 3 cut(s) 90, 107, 196
AjiI CACGTC 1 cut(s) 139
AluBI AGCT 2 cut(s) 145, 209
AluI AGCT 2 cut(s) 145, 209
Alw26I GTCTC 1 cut(s) 102
AlwI GGATC 1 cut(s) 126
Asp700I GAANNNNTTC 3 cut(s) 11, 85, 146
BclI TGATCA 1 cut(s) 22
BcoDI GTCTC 1 cut(s) 102
BisI GCNGC 1 cut(s) 35
BlsI GCNGC 1 cut(s) 36
BmgBI CACGTC 1 cut(s) 139
BpmI CTGGAG 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 102
BsmAI GTCTC 1 cut(s) 102
Bso31I GGTCTC 1 cut(s) 102
Bsp143I GATC 2 cut(s) 22, 131
BspACI CCGC 1 cut(s) 35
BspPI GGATC 1 cut(s) 126
BspQI GCTCTTC 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 102
BssMI GATC 2 cut(s) 22, 131
Bst4CI ACNGT 1 cut(s) 55
Bst6I CTCTTC 1 cut(s) 152
BstKTI GATC 2 cut(s) 25, 134
BstMAI GTCTC 1 cut(s) 102
BstMBI GATC 2 cut(s) 22, 131
BtrI CACGTC 1 cut(s) 139
CviJI RGCY 6 cut(s) 12, 34, 75, 145, 179, 209
CviKI_1 RGCY 6 cut(s) 12, 34, 75, 145, 179, 209
DpnI GATC 2 cut(s) 24, 133
DpnII GATC 2 cut(s) 22, 131
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco31I GGTCTC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 195
FaiI YATR 5 cut(s) 78, 153, 176, 233, 247
FbaI TGATCA 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 35
Fsp4HI GCNGC 1 cut(s) 35
GluI GCNGC 1 cut(s) 35
GsuI CTGGAG 1 cut(s) 59
HindIII AAGCTT 1 cut(s) 207
HinfI GANTC 2 cut(s) 107, 192
Hpy188I TCNGA 3 cut(s) 27, 136, 161
Hpy188III TCNNGA 2 cut(s) 16, 185
Hpy99I CGWCG 1 cut(s) 140
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4IV ACGT 1 cut(s) 138
HpyCH4V TGCA 1 cut(s) 68
HpySE526I ACGT 1 cut(s) 138
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 2 cut(s) 22, 131
LguI GCTCTTC 1 cut(s) 152
LpnPI CCDG 4 cut(s) 23, 96, 170, 198
MaeII ACGT 1 cut(s) 138
MalI GATC 2 cut(s) 24, 133
MboI GATC 2 cut(s) 22, 131
MboII GAAGA 1 cut(s) 139
MluCI AATT 2 cut(s) 43, 60
MmeI TCCRAC 1 cut(s) 159
MroXI GAANNNNTTC 3 cut(s) 11, 85, 146
MseI TTAA 1 cut(s) 117
MspA1I CMGCKG 1 cut(s) 37
NdeII GATC 2 cut(s) 22, 131
PciSI GCTCTTC 1 cut(s) 152
PdmI GAANNNNTTC 3 cut(s) 11, 85, 146
PfeI GAWTC 2 cut(s) 107, 192
PkrI GCNGC 1 cut(s) 36
PsrI GAACNNNNNNTAC 2 cut(s) 210, 242
SapI GCTCTTC 1 cut(s) 152
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 1 cut(s) 35
Sau3AI GATC 2 cut(s) 22, 131
SetI ASST 5 cut(s) 141, 147, 168, 211, 217
SgeI CNNG 9 cut(s) 28, 50, 96, 106, 123, 151, 179, 197, 225
Sse9I AATT 2 cut(s) 43, 60
SsiI CCGC 1 cut(s) 35
TaaI ACNGT 1 cut(s) 55
TaiI ACGT 1 cut(s) 141
TaqI TCGA 1 cut(s) 15
TasI AATT 2 cut(s) 43, 60
TauI GCSGC 1 cut(s) 37
TfiI GAWTC 2 cut(s) 107, 192
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
XmnI GAANNNNTTC 3 cut(s) 11, 85, 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.