RLG00000029252

Kinetochore protein Nuf2

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
35444421 .. 35445287
867 bp
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UTR
Exon/CDS
Intron
RLM00000029252

Sequence Viewer

Length: 354 bp
ATGAATTCGATTGATAACATGTTTCAATTTCTGTTCTGGAGTCCGATCAGGTCTTTGATTGAATTAGGGTTTAATGTTGATAAGGGATTCGACGTGAAGCTCTTCTATGGGGCCAGAAACCTTGACAGAATGGCTTATCGGTTGAATGCTGAGATTGCAGACTTCAATGAAGCAAGAGAAAAGGAGTTGCCTCTTCTTCAAGAGGTAGATGCCGAAGTTAAAGAATTGCTCCAAACCATTGAAGGCCTTAACAACAACCAAGTTAAAGTCAGAACTTTTCTCAAGAAGTTGAAGGAGAAGAGTGGAGGAATGGACAAAGAGGTCAGATTGTTCAAAGATTTTTATATCAATTAG

Protein Analysis

118

Amino Acids

13.77

Weight (kDa)

5.56

Isoelectric Point (pI)

28.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
AcsI RAATTY 1 cut(s) 4
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 8 cut(s) 26, 62, 145, 166, 200, 242, 292, 334
AjiI CACGTC 1 cut(s) 94
AluBI AGCT 1 cut(s) 100
AluI AGCT 1 cut(s) 100
AoxI GGCC 2 cut(s) 111, 244
ApoI RAATTY 1 cut(s) 4
Asp700I GAANNNNTTC 1 cut(s) 101
AspS9I GGNCC 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 111
BmiI GGNNCC 1 cut(s) 112
BmsI GCATC 1 cut(s) 199
BpmI CTGGAG 1 cut(s) 58
BpuEI CTTGAG 1 cut(s) 266
BseMII CTCAG 1 cut(s) 141
BshFI GGCC 2 cut(s) 113, 246
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 2 cut(s) 113, 246
Bsp143I GATC 1 cut(s) 45
BspANI GGCC 2 cut(s) 113, 246
BspCNI CTCAG 1 cut(s) 142
BspLI GGNNCC 1 cut(s) 112
BspQI GCTCTTC 1 cut(s) 107
BssMI GATC 1 cut(s) 45
Bst6I CTCTTC 3 cut(s) 107, 198, 293
BstDEI CTNAG 1 cut(s) 150
BstKTI GATC 1 cut(s) 48
BstMBI GATC 1 cut(s) 45
BstMWI GCNNNNNNNGC 1 cut(s) 155
BstNSI RCATGY 1 cut(s) 22
BsuRI GGCC 2 cut(s) 113, 246
BtrI CACGTC 1 cut(s) 94
Cfr13I GGNCC 1 cut(s) 111
CviAII CATG 1 cut(s) 19
CviJI RGCY 4 cut(s) 100, 113, 134, 246
CviKI_1 RGCY 4 cut(s) 100, 113, 134, 246
DdeI CTNAG 1 cut(s) 150
DpnI GATC 1 cut(s) 47
DpnII GATC 1 cut(s) 45
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
Eam1104I CTCTTC 3 cut(s) 107, 198, 293
EarI CTCTTC 3 cut(s) 107, 198, 293
Eco147I AGGCCT 1 cut(s) 246
EcoRI GAATTC 1 cut(s) 4
FaeI CATG 1 cut(s) 22
FaiI YATR 3 cut(s) 20, 108, 345
FatI CATG 1 cut(s) 18
GsuI CTGGAG 1 cut(s) 58
HaeIII GGCC 2 cut(s) 113, 246
Hin1II CATG 1 cut(s) 22
HinfI GANTC 2 cut(s) 40, 87
Hpy188I TCNGA 3 cut(s) 45, 272, 326
Hpy188III TCNNGA 3 cut(s) 37, 200, 283
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 2 cut(s) 236, 286
HpyCH4IV ACGT 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 158
HpyF10VI GCNNNNNNNGC 1 cut(s) 155
HpyF3I CTNAG 1 cut(s) 150
HpySE526I ACGT 1 cut(s) 93
Hsp92II CATG 1 cut(s) 22
Kzo9I GATC 1 cut(s) 45
LguI GCTCTTC 1 cut(s) 107
LmnI GCTCC 1 cut(s) 234
LpnPI CCDG 3 cut(s) 22, 34, 127
LweI GCATC 1 cut(s) 199
MaeII ACGT 1 cut(s) 93
MalI GATC 1 cut(s) 47
MboI GATC 1 cut(s) 45
MboII GAAGA 4 cut(s) 94, 185, 188, 310
MluCI AATT 5 cut(s) 4, 26, 62, 224, 349
MlyI GAGTC 1 cut(s) 49
MnlI CCTC 4 cut(s) 196, 201, 299, 313
MroXI GAANNNNTTC 1 cut(s) 101
MseI TTAA 4 cut(s) 72, 219, 249, 264
Mva1269I GAATGC 1 cut(s) 151
MwoI GCNNNNNNNGC 1 cut(s) 155
NdeII GATC 1 cut(s) 45
NlaIII CATG 1 cut(s) 22
NlaIV GGNNCC 1 cut(s) 112
NspI RCATGY 1 cut(s) 22
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 18
PciSI GCTCTTC 1 cut(s) 107
PctI GAATGC 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 101
PfeI GAWTC 1 cut(s) 87
PleI GAGTC 1 cut(s) 48
PpsI GAGTC 1 cut(s) 48
PscI ACATGT 1 cut(s) 18
PspN4I GGNNCC 1 cut(s) 112
PspPI GGNCC 1 cut(s) 111
SapI GCTCTTC 1 cut(s) 107
SaqAI TTAA 4 cut(s) 72, 219, 249, 264
Sau3AI GATC 1 cut(s) 45
Sau96I GGNCC 1 cut(s) 111
SchI GAGTC 1 cut(s) 49
SetI ASST 6 cut(s) 53, 96, 102, 123, 207, 324
SfaNI GCATC 1 cut(s) 199
SmlI CTYRAG 1 cut(s) 281
SmoI CTYRAG 1 cut(s) 281
Sse9I AATT 5 cut(s) 4, 26, 62, 224, 349
SseBI AGGCCT 1 cut(s) 246
StuI AGGCCT 1 cut(s) 246
TaiI ACGT 1 cut(s) 96
TaqI TCGA 2 cut(s) 8, 90
TasI AATT 5 cut(s) 4, 26, 62, 224, 349
TfiI GAWTC 1 cut(s) 87
Tru1I TTAA 4 cut(s) 72, 219, 249, 264
Tru9I TTAA 4 cut(s) 72, 219, 249, 264
TspDTI ATGAA 2 cut(s) 17, 183
XapI RAATTY 1 cut(s) 4
XceI RCATGY 1 cut(s) 22
XmnI GAANNNNTTC 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.