Rh5CG508600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
70891479 .. 70892934
1456 bp
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UTR
Exon/CDS
Intron
Rh5CG508600.1

Sequence Viewer

Length: 216 bp
ATGACCAACAAATTTGACGACTCTAACACAATTCCTTATGATTGGAGTTGCCTTGCAGAGGGCATTACCATTATTTTCATACTTCCTGGAGCTTTCAATATTCACCACGAATTAAATGTTCTTGGAGTGGATTTGGAAAATGTGGCAAAAATAGCAACAACATCATCTGCTTTGAAAGAGGAAGAGCTCAAGCTGCGTTTCAAAATAGCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

7.94

Weight (kDa)

4.89

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 11
AfiI CCNNNNNNNGG 1 cut(s) 58
AgsI TTSAA 3 cut(s) 97, 175, 202
AjnI CCWGG 1 cut(s) 85
AluBI AGCT 3 cut(s) 92, 187, 193
AluI AGCT 3 cut(s) 92, 187, 193
Alw21I GWGCWC 1 cut(s) 189
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 95
BanII GRGCYC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 189
BbvI GCAGC 1 cut(s) 180
BciT130I CCWGG 1 cut(s) 87
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
Bme1390I CCNGG 1 cut(s) 87
BmrFI CCNGG 1 cut(s) 87
BpmI CTGGAG 1 cut(s) 108
BpuEI CTTGAG 1 cut(s) 173
Bsc4I CCNNNNNNNGG 1 cut(s) 58
BseBI CCWGG 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 58
BseXI GCAGC 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 189
BslI CCNNNNNNNGG 1 cut(s) 58
Bsp1286I GDGCHC 1 cut(s) 189
BspQI GCTCTTC 1 cut(s) 177
Bst2UI CCWGG 1 cut(s) 87
Bst6I CTCTTC 1 cut(s) 177
BstENI CCTNNNNNAGG 1 cut(s) 56
BstMWI GCNNNNNNNGC 2 cut(s) 152, 193
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstV1I GCAGC 1 cut(s) 180
CviJI RGCY 3 cut(s) 92, 187, 193
CviKI_1 RGCY 3 cut(s) 92, 187, 193
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 187
Eco24I GRGCYC 1 cut(s) 189
Eco53kI GAGCTC 1 cut(s) 187
EcoICRI GAGCTC 1 cut(s) 187
EcoNI CCTNNNNNAGG 1 cut(s) 56
EcoRII CCWGG 1 cut(s) 85
EcoT38I GRGCYC 1 cut(s) 189
FaiI YATR 2 cut(s) 39, 80
Fnu4HI GCNGC 1 cut(s) 194
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 1 cut(s) 194
GluI GCNGC 1 cut(s) 194
GsuI CTGGAG 1 cut(s) 108
HinfI GANTC 1 cut(s) 20
HphI GGTGA 1 cut(s) 95
HpyCH4V TGCA 1 cut(s) 56
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 193
LguI GCTCTTC 1 cut(s) 177
LmnI GCTCC 1 cut(s) 89
LpnPI CCDG 2 cut(s) 72, 99
Lsp1109I GCAGC 1 cut(s) 180
MboII GAAGA 1 cut(s) 194
MhlI GDGCHC 1 cut(s) 189
MluCI AATT 4 cut(s) 11, 30, 110, 211
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 2 cut(s) 52, 172
MseI TTAA 2 cut(s) 113, 214
MspR9I CCNGG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 87
MwoI GCNNNNNNNGC 2 cut(s) 152, 193
PciSI GCTCTTC 1 cut(s) 177
PfoI TCCNGGA 1 cut(s) 85
PkrI GCNGC 1 cut(s) 195
PleI GAGTC 1 cut(s) 14
PpsI GAGTC 1 cut(s) 14
Psp124BI GAGCTC 1 cut(s) 189
Psp6I CCWGG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 85
SacI GAGCTC 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 2 cut(s) 113, 214
SatI GCNGC 1 cut(s) 194
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 87
SduI GDGCHC 1 cut(s) 189
SetI ASST 3 cut(s) 94, 189, 195
SgeI CNNG 6 cut(s) 65, 98, 99, 119, 134, 202
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
Sse9I AATT 4 cut(s) 11, 30, 110, 211
SspI AATATT 1 cut(s) 100
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 1 cut(s) 85
TasI AATT 4 cut(s) 11, 30, 110, 211
Tru1I TTAA 2 cut(s) 113, 214
Tru9I TTAA 2 cut(s) 113, 214
TseI GCWGC 1 cut(s) 193
TspDTI ATGAA 1 cut(s) 67
XagI CCTNNNNNAGG 1 cut(s) 56
XapI RAATTY 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.