zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 855 |
| Acc36I | ACCTGC | 1 cut(s) | 494 |
| AciI | CCGC | 1 cut(s) | 1008 |
| AclWI | GGATC | 1 cut(s) | 897 |
| AcoI | YGGCCR | 2 cut(s) | 3, 610 |
| AcsI | RAATTY | 1 cut(s) | 587 |
| AcuI | CTGAAG | 3 cut(s) | 206, 966, 1121 |
| AfaI | GTAC | 3 cut(s) | 430, 463, 546 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 256 |
| AgsI | TTSAA | 4 cut(s) | 78, 180, 293, 592 |
| AjnI | CCWGG | 1 cut(s) | 1148 |
| AleI | CACNNNNGTG | 1 cut(s) | 144 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 676, 708 |
| AluBI | AGCT | 6 cut(s) | 335, 358, 415, 715, 746, 1028 |
| AluI | AGCT | 6 cut(s) | 335, 358, 415, 715, 746, 1028 |
| Alw21I | GWGCWC | 3 cut(s) | 116, 151, 911 |
| Alw26I | GTCTC | 3 cut(s) | 28, 879, 1187 |
| Alw44I | GTGCAC | 2 cut(s) | 112, 147 |
| AlwI | GGATC | 1 cut(s) | 897 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 791 |
| AoxI | GGCC | 6 cut(s) | 3, 24, 523, 610, 733, 1145 |
| ApaI | GGGCCC | 2 cut(s) | 527, 1149 |
| ApaLI | GTGCAC | 2 cut(s) | 112, 147 |
| ApoI | RAATTY | 1 cut(s) | 587 |
| AseI | ATTAAT | 1 cut(s) | 486 |
| AspLEI | GCGC | 3 cut(s) | 92, 771, 856 |
| AspS9I | GGNCC | 9 cut(s) | 24, 523, 524, 602, 796, 817, 1145, 1146, 1207 |
| AsuC2I | CCSGG | 1 cut(s) | 655 |
| AsuHPI | GGTGA | 4 cut(s) | 308, 509, 880, 1181 |
| AvaII | GGWCC | 4 cut(s) | 602, 796, 817, 1207 |
| BaeGI | GKGCMC | 7 cut(s) | 116, 151, 369, 527, 661, 1135, 1149 |
| BalI | TGGCCA | 2 cut(s) | 5, 612 |
| BanII | GRGCYC | 2 cut(s) | 527, 1149 |
| BauI | CACGAG | 1 cut(s) | 904 |
| BbsI | GAAGAC | 1 cut(s) | 1221 |
| Bbv12I | GWGCWC | 3 cut(s) | 116, 151, 911 |
| BccI | CCATC | 4 cut(s) | 160, 428, 659, 1093 |
| BceAI | ACGGC | 1 cut(s) | 444 |
| BciT130I | CCWGG | 1 cut(s) | 1150 |
| BcnI | CCSGG | 1 cut(s) | 655 |
| BcoDI | GTCTC | 3 cut(s) | 28, 879, 1187 |
| BfmI | CTRYAG | 1 cut(s) | 127 |
| BfuAI | ACCTGC | 1 cut(s) | 494 |
| BlpI | GCTNAGC | 1 cut(s) | 1029 |
| Bme1390I | CCNGG | 2 cut(s) | 655, 1150 |
| Bme18I | GGWCC | 4 cut(s) | 602, 796, 817, 1207 |
| BmgT120I | GGNCC | 9 cut(s) | 24, 523, 524, 602, 796, 817, 1145, 1146, 1207 |
| BmiI | GGNNCC | 5 cut(s) | 134, 525, 818, 1147, 1209 |
| BmrFI | CCNGG | 2 cut(s) | 655, 1150 |
| BmrI | ACTGGG | 1 cut(s) | 393 |
| BmsI | GCATC | 2 cut(s) | 293, 1009 |
| BmuI | ACTGGG | 1 cut(s) | 393 |
| BpiI | GAAGAC | 1 cut(s) | 1221 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1029 |
| BpuEI | CTTGAG | 2 cut(s) | 726, 1202 |
| BpuMI | CCSGG | 1 cut(s) | 655 |
| Bsa29I | ATCGAT | 1 cut(s) | 301 |
| BsaI | GGTCTC | 2 cut(s) | 28, 1187 |
| BsaJI | CCNNGG | 6 cut(s) | 361, 527, 624, 654, 1148, 1149 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 256 |
| Bse118I | RCCGGY | 1 cut(s) | 425 |
| Bse1I | ACTGG | 7 cut(s) | 62, 165, 388, 469, 1034, 1171, 1183 |
| Bse3DI | GCAATG | 2 cut(s) | 211, 238 |
| BseBI | CCWGG | 1 cut(s) | 1150 |
| BseCI | ATCGAT | 1 cut(s) | 301 |
| BseDI | CCNNGG | 6 cut(s) | 361, 527, 624, 654, 1148, 1149 |
| BseGI | GGATG | 1 cut(s) | 670 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BseMI | GCAATG | 2 cut(s) | 211, 238 |
| BseMII | CTCAG | 2 cut(s) | 236, 798 |
| BseNI | ACTGG | 7 cut(s) | 62, 165, 388, 469, 1034, 1171, 1183 |
| BseSI | GKGCMC | 7 cut(s) | 116, 151, 369, 527, 661, 1135, 1149 |
| BseYI | CCCAGC | 2 cut(s) | 335, 885 |
| BsgI | GTGCAG | 2 cut(s) | 122, 904 |
| BshFI | GGCC | 6 cut(s) | 5, 26, 525, 612, 735, 1147 |
| BshVI | ATCGAT | 1 cut(s) | 301 |
| BsiHKAI | GWGCWC | 3 cut(s) | 116, 151, 911 |
| BsiSI | CCGG | 2 cut(s) | 426, 654 |
| BslFI | GGGAC | 4 cut(s) | 232, 467, 830, 1167 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BsmAI | GTCTC | 3 cut(s) | 28, 879, 1187 |
| BsmFI | GGGAC | 4 cut(s) | 232, 467, 830, 1167 |
| BsmI | GAATGC | 2 cut(s) | 856, 1017 |
| BsnI | GGCC | 6 cut(s) | 5, 26, 525, 612, 735, 1147 |
| Bso31I | GGTCTC | 2 cut(s) | 28, 1187 |
| Bsp120I | GGGCCC | 2 cut(s) | 523, 1145 |
| Bsp1286I | GDGCHC | 8 cut(s) | 116, 151, 369, 527, 661, 911, 1135, 1149 |
| Bsp143I | GATC | 2 cut(s) | 298, 889 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1029 |
| Bsp19I | CCATGG | 2 cut(s) | 527, 624 |
| BspACI | CCGC | 1 cut(s) | 1008 |
| BspANI | GGCC | 6 cut(s) | 5, 26, 525, 612, 735, 1147 |
| BspCNI | CTCAG | 2 cut(s) | 235, 797 |
| BspDI | ATCGAT | 1 cut(s) | 301 |
| BspHI | TCATGA | 1 cut(s) | 1232 |
| BspLI | GGNNCC | 5 cut(s) | 134, 525, 818, 1147, 1209 |
| BspMI | ACCTGC | 1 cut(s) | 494 |
| BspPI | GGATC | 1 cut(s) | 897 |
| BspTNI | GGTCTC | 2 cut(s) | 28, 1187 |
| BsrDI | GCAATG | 2 cut(s) | 211, 238 |
| BsrFI | RCCGGY | 1 cut(s) | 425 |
| BsrI | ACTGG | 7 cut(s) | 62, 165, 388, 469, 1034, 1171, 1183 |
| BssAI | RCCGGY | 1 cut(s) | 425 |
| BssECI | CCNNGG | 6 cut(s) | 361, 527, 624, 654, 1148, 1149 |
| BssMI | GATC | 2 cut(s) | 298, 889 |
| BssSI | CACGAG | 1 cut(s) | 904 |
| BssT1I | CCWWGG | 3 cut(s) | 361, 527, 624 |
| Bst2BI | CACGAG | 1 cut(s) | 904 |
| Bst2UI | CCWGG | 1 cut(s) | 1150 |
| Bst4CI | ACNGT | 5 cut(s) | 85, 442, 763, 834, 1227 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 215 |
| BstC8I | GCNNGC | 2 cut(s) | 621, 717 |
| BstDEI | CTNAG | 6 cut(s) | 9, 117, 222, 784, 1004, 1029 |
| BstDSI | CCRYGG | 2 cut(s) | 527, 624 |
| BstF5I | GGATG | 1 cut(s) | 670 |
| BstHHI | GCGC | 3 cut(s) | 92, 771, 856 |
| BstKTI | GATC | 2 cut(s) | 301, 892 |
| BstMAI | GTCTC | 3 cut(s) | 28, 879, 1187 |
| BstMBI | GATC | 2 cut(s) | 298, 889 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 215, 364, 775 |
| BstNI | CCWGG | 1 cut(s) | 1150 |
| BstNSI | RCATGY | 1 cut(s) | 623 |
| BstSCI | CCNGG | 2 cut(s) | 653, 1148 |
| BstSFI | CTRYAG | 1 cut(s) | 127 |
| BstSLI | GKGCMC | 7 cut(s) | 116, 151, 369, 527, 661, 1135, 1149 |
| BstV2I | GAAGAC | 1 cut(s) | 1221 |
| Bsu15I | ATCGAT | 1 cut(s) | 301 |
| BsuRI | GGCC | 6 cut(s) | 5, 26, 525, 612, 735, 1147 |
| BsuTUI | ATCGAT | 1 cut(s) | 301 |
| BtgI | CCRYGG | 2 cut(s) | 527, 624 |
| BtgZI | GCGATG | 1 cut(s) | 1068 |
| BtsCI | GGATG | 1 cut(s) | 670 |
| BtsI | GCAGTG | 1 cut(s) | 484 |
| BtsIMutI | CAGTG | 6 cut(s) | 158, 381, 484, 839, 942, 1164 |
| BveI | ACCTGC | 1 cut(s) | 494 |
| Cac8I | GCNNGC | 2 cut(s) | 621, 717 |
| CaiI | CAGNNNCTG | 1 cut(s) | 791 |
| CciI | TCATGA | 1 cut(s) | 1232 |
| CfoI | GCGC | 3 cut(s) | 92, 771, 856 |
| Cfr10I | RCCGGY | 1 cut(s) | 425 |
| Cfr13I | GGNCC | 9 cut(s) | 24, 523, 524, 602, 796, 817, 1145, 1146, 1207 |
| ClaI | ATCGAT | 1 cut(s) | 301 |
| CseI | GACGC | 1 cut(s) | 1181 |
| Csp6I | GTAC | 3 cut(s) | 429, 462, 545 |
| CviAII | CATG | 8 cut(s) | 321, 528, 564, 620, 625, 989, 1050, 1233 |
| CviQI | GTAC | 3 cut(s) | 429, 462, 545 |
| DdeI | CTNAG | 6 cut(s) | 9, 117, 222, 784, 1004, 1029 |
| DpnI | GATC | 2 cut(s) | 300, 891 |
| DpnII | GATC | 2 cut(s) | 298, 889 |
| EaeI | YGGCCR | 2 cut(s) | 3, 610 |
| Eco130I | CCWWGG | 3 cut(s) | 361, 527, 624 |
| Eco24I | GRGCYC | 2 cut(s) | 527, 1149 |
| Eco31I | GGTCTC | 2 cut(s) | 28, 1187 |
| Eco47I | GGWCC | 4 cut(s) | 602, 796, 817, 1207 |
| Eco57I | CTGAAG | 3 cut(s) | 206, 966, 1121 |
| EcoO109I | RGGNCCY | 3 cut(s) | 523, 817, 1145 |
| EcoRI | GAATTC | 1 cut(s) | 587 |
| EcoRII | CCWGG | 1 cut(s) | 1148 |
| EcoT14I | CCWWGG | 3 cut(s) | 361, 527, 624 |
| EcoT22I | ATGCAT | 1 cut(s) | 211 |
| EcoT38I | GRGCYC | 2 cut(s) | 527, 1149 |
| ErhI | CCWWGG | 3 cut(s) | 361, 527, 624 |
| FaeI | CATG | 8 cut(s) | 324, 531, 567, 623, 628, 992, 1053, 1236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1022, 1054 |
| FaqI | GGGAC | 4 cut(s) | 232, 467, 830, 1167 |
| FatI | CATG | 8 cut(s) | 320, 527, 563, 619, 624, 988, 1049, 1232 |
| FokI | GGATG | 1 cut(s) | 677 |
| FriOI | GRGCYC | 2 cut(s) | 527, 1149 |
| FspAI | RTGCGCAY | 1 cut(s) | 855 |
| FspI | TGCGCA | 1 cut(s) | 855 |
| GlaI | GCGC | 3 cut(s) | 91, 770, 855 |
| GsaI | CCCAGC | 2 cut(s) | 339, 889 |
| HaeIII | GGCC | 6 cut(s) | 5, 26, 525, 612, 735, 1147 |
| HapII | CCGG | 2 cut(s) | 426, 654 |
| HgaI | GACGC | 1 cut(s) | 1181 |
| HhaI | GCGC | 3 cut(s) | 92, 771, 856 |
| Hin1II | CATG | 8 cut(s) | 324, 531, 567, 623, 628, 992, 1053, 1236 |
| Hin6I | GCGC | 3 cut(s) | 90, 769, 854 |
| HinP1I | GCGC | 3 cut(s) | 90, 769, 854 |
| HindIII | AAGCTT | 1 cut(s) | 413 |
| HinfI | GANTC | 1 cut(s) | 824 |
| HpaII | CCGG | 2 cut(s) | 426, 654 |
| HphI | GGTGA | 4 cut(s) | 308, 509, 880, 1181 |
| Hpy166II | GTNNAC | 4 cut(s) | 114, 149, 545, 796 |
| Hpy188III | TCNNGA | 2 cut(s) | 398, 1233 |
| Hpy8I | GTNNAC | 4 cut(s) | 114, 149, 545, 796 |
| HpyAV | CCTTC | 7 cut(s) | 15, 102, 181, 193, 287, 367, 941 |
| HpyCH4III | ACNGT | 5 cut(s) | 85, 442, 763, 834, 1227 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 215, 364, 775 |
| HpyF3I | CTNAG | 6 cut(s) | 9, 117, 222, 784, 1004, 1029 |
| Hsp92II | CATG | 8 cut(s) | 324, 531, 567, 623, 628, 992, 1053, 1236 |
| HspAI | GCGC | 3 cut(s) | 90, 769, 854 |
| Kzo9I | GATC | 2 cut(s) | 298, 889 |
| LmnI | GCTCC | 2 cut(s) | 332, 363 |
| LweI | GCATC | 2 cut(s) | 293, 1009 |
| MaeIII | GTNAC | 4 cut(s) | 379, 841, 964, 1169 |
| MalI | GATC | 2 cut(s) | 300, 891 |
| MboI | GATC | 2 cut(s) | 298, 889 |
| MboII | GAAGA | 3 cut(s) | 66, 995, 1221 |
| MhlI | GDGCHC | 8 cut(s) | 116, 151, 369, 527, 661, 911, 1135, 1149 |
| MlsI | TGGCCA | 2 cut(s) | 5, 612 |
| MluCI | AATT | 4 cut(s) | 283, 587, 893, 1106 |
| MluNI | TGGCCA | 2 cut(s) | 5, 612 |
| MnlI | CCTC | 4 cut(s) | 180, 514, 944, 1226 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 612 |
| Mph1103I | ATGCAT | 1 cut(s) | 211 |
| MscI | TGGCCA | 2 cut(s) | 5, 612 |
| MseI | TTAA | 3 cut(s) | 486, 558, 758 |
| MslI | CAYNNNNRTG | 2 cut(s) | 144, 861 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 612 |
| MspA1I | CMGCKG | 1 cut(s) | 715 |
| MspI | CCGG | 2 cut(s) | 426, 654 |
| MspR9I | CCNGG | 2 cut(s) | 655, 1150 |
| Mva1269I | GAATGC | 2 cut(s) | 856, 1017 |
| MvaI | CCWGG | 1 cut(s) | 1150 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 215, 364, 775 |
| NciI | CCSGG | 1 cut(s) | 655 |
| NcoI | CCATGG | 2 cut(s) | 527, 624 |
| NdeII | GATC | 2 cut(s) | 298, 889 |
| NlaIII | CATG | 8 cut(s) | 324, 531, 567, 623, 628, 992, 1053, 1236 |
| NlaIV | GGNNCC | 5 cut(s) | 134, 525, 818, 1147, 1209 |
| NmuCI | GTSAC | 4 cut(s) | 379, 841, 964, 1169 |
| NsbI | TGCGCA | 1 cut(s) | 855 |
| NsiI | ATGCAT | 1 cut(s) | 211 |
| NspI | RCATGY | 1 cut(s) | 623 |
| OliI | CACNNNNGTG | 1 cut(s) | 144 |
| PaeI | GCATGC | 1 cut(s) | 623 |
| PagI | TCATGA | 1 cut(s) | 1232 |
| PasI | CCCWGGG | 1 cut(s) | 1149 |
| PctI | GAATGC | 2 cut(s) | 856, 1017 |
| PfeI | GAWTC | 1 cut(s) | 824 |
| PflFI | GACNNNGTC | 1 cut(s) | 1211 |
| PpuMI | RGGWCCY | 1 cut(s) | 817 |
| PshBI | ATTAAT | 1 cut(s) | 486 |
| Psp5II | RGGWCCY | 1 cut(s) | 817 |
| Psp6I | CCWGG | 1 cut(s) | 1148 |
| PspFI | CCCAGC | 2 cut(s) | 335, 885 |
| PspGI | CCWGG | 1 cut(s) | 1148 |
| PspN4I | GGNNCC | 5 cut(s) | 134, 525, 818, 1147, 1209 |
| PspOMI | GGGCCC | 2 cut(s) | 523, 1145 |
| PspPI | GGNCC | 9 cut(s) | 24, 523, 524, 602, 796, 817, 1145, 1146, 1207 |
| PspPPI | RGGWCCY | 1 cut(s) | 817 |
| PstNI | CAGNNNCTG | 1 cut(s) | 791 |
| PsyI | GACNNNGTC | 1 cut(s) | 1211 |
| PvuII | CAGCTG | 1 cut(s) | 715 |
| RsaI | GTAC | 3 cut(s) | 430, 463, 546 |
| RsaNI | GTAC | 3 cut(s) | 429, 462, 545 |
| RseI | CAYNNNNRTG | 2 cut(s) | 144, 861 |
| SaqAI | TTAA | 3 cut(s) | 486, 558, 758 |
| Sau3AI | GATC | 2 cut(s) | 298, 889 |
| Sau96I | GGNCC | 9 cut(s) | 24, 523, 524, 602, 796, 817, 1145, 1146, 1207 |
| ScrFI | CCNGG | 2 cut(s) | 655, 1150 |
| SduI | GDGCHC | 8 cut(s) | 116, 151, 369, 527, 661, 911, 1135, 1149 |
| SfaNI | GCATC | 2 cut(s) | 293, 1009 |
| SfcI | CTRYAG | 1 cut(s) | 127 |
| SinI | GGWCC | 4 cut(s) | 602, 796, 817, 1207 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 144, 861 |
| SmlI | CTYRAG | 2 cut(s) | 741, 1217 |
| SmoI | CTYRAG | 2 cut(s) | 741, 1217 |
| SphI | GCATGC | 1 cut(s) | 623 |
| Sse9I | AATT | 4 cut(s) | 283, 587, 893, 1106 |
| SsiI | CCGC | 1 cut(s) | 1008 |
| StyD4I | CCNGG | 2 cut(s) | 653, 1148 |
| StyI | CCWWGG | 3 cut(s) | 361, 527, 624 |
| TaaI | ACNGT | 5 cut(s) | 85, 442, 763, 834, 1227 |
| TaqI | TCGA | 2 cut(s) | 58, 301 |
| TasI | AATT | 4 cut(s) | 283, 587, 893, 1106 |
| TfiI | GAWTC | 1 cut(s) | 824 |
| Tru1I | TTAA | 3 cut(s) | 486, 558, 758 |
| Tru9I | TTAA | 3 cut(s) | 486, 558, 758 |
| TscAI | CASTG | 6 cut(s) | 165, 388, 484, 839, 949, 1171 |
| TseFI | GTSAC | 4 cut(s) | 379, 841, 964, 1169 |
| Tsp45I | GTSAC | 4 cut(s) | 379, 841, 964, 1169 |
| TspDTI | ATGAA | 2 cut(s) | 654, 1221 |
| TspRI | CASTG | 6 cut(s) | 165, 388, 484, 839, 949, 1171 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1211 |
| VneI | GTGCAC | 2 cut(s) | 112, 147 |
| VpaK11BI | GGWCC | 4 cut(s) | 602, 796, 817, 1207 |
| VspI | ATTAAT | 1 cut(s) | 486 |
| XapI | RAATTY | 1 cut(s) | 587 |
| XceI | RCATGY | 1 cut(s) | 623 |
| Zsp2I | ATGCAT | 1 cut(s) | 211 |