Rh4DG069500

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000488
Physical Location & Seq
Reverse (-)
10295893 .. 10297149
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG069500.1

Sequence Viewer

Length: 1257 bp
ATGGCTCTCAAGGTATCGAATTCCAGACTCACAAGGAGAGAAGGATCTGTTTATGCAAGAAGACCTGCTTCCGAAACCGTCTGCAAGTTTTGCGCGATGGGTAGATGCCTCAAGAAAGAGTGCCGGTTCCTACACGCTGACCCGGAACAAAAGACTCTTGCTTTAATGGAGGAGGAGGCAAAATCTTTGGGGAAAGCATCTGATTCTGCTACTGTTAATGTTAATGTTGAGAAAAGCATTGGTACCCATAAAGAGAAAGCAAAGGCCGAAGCAGTCTGCAAGTTCTGGGCAGATGGGAAGTGTGTAAGACGAGGGTGCCCTTATTTGCACAGTTGGTTCCGTGGAGATGGTTTTTCTTCCTTGGCAAAGCTCCAAGGCCATAAGAAGGGGATAACCGGAATTGTGCTTCCTGAGGGAAGTAGCAGTCTCTATTCTGCTGCCAAAGACGGAACCGTTACGGTTTGGGACTGCAACACTGGTGAATGCAGCAGGGTAATCAATCTTGGTGCCGAAGCAGGCTGCTTGATTAGTAAGGGTGTGTGGATTTTCTGCGGTGCTTCCAATCTCGTCAAGGCCTGGAATATTGAGTCCAATGCTGAATTTACCCTAGTTGGACCTGTTGGTCAAATCCATGCCATGGAAGTTGGGAATGATATGGTATTTGCTGGGGCAGAGGAGGGTGTTATATATGTGTGGAAAGGCAAAGCCTGTTCCGATGCTAAAGCGAATCCATTTCACCTTCATCAGGCTCTCAGTGGCCACACTGCTGCTGTGGTTTCTTTAAGGGTTGGAAATATCAGGCTCTACTCAGGTTCTGTGGACCATACAATAAGGGTGTGGAATCTGGACACTTTGGAGTGTGCTATGACTCTAAATGGACATTCTGATGCTGTGACGTCTCTTATATGTTGGACCACATTTCTGATCTCATGCTCATTAGACCACACGATAAAGGTGTGGACTATGTGTAAAGGAGGCAACATTGAAGAAATCTACACTCACACTGAAGAAGACGGTCTTCTTGCTCTCTCTGGAATGCATGATGCTGAAGACAAACCAGTCCTACTTTGCTCATCAAAAGACAATTCTGTCCGCATATATGATTTGCCATCCTTTGATGAGAGGGGAAGATTATTTGCAAAACGAGAAGTTCGGGCTATTCAAGTAGGCCCTGGAGGACTATTCTTCACTGGGGATGAAACTGGTGGACTTTCCGTGTGGAAGTGGCTGGAACCTGCAGTCAAACAAGAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04120 map03040 map04120
Pfam Domains
Protein Families
WD40 zf-CCCH

Protein Analysis

418

Amino Acids

45.53

Weight (kDa)

7.16

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 115 - 166 1.1e-06 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 120 - 166 2e-06 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 122 - 262 1.9e-08 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 182 - 337 4e-20 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 182 - 409 3.9e-12 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 182 - 378 2.8e-11 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 187 - 336 7.5e-09 TEP-1 second beta-propeller
Beta-prop_IP5PC_F PF23754 212 - 302 6.7e-07 IP5P C-F beta-propeller
WD40_Prp19 PF24814 218 - 301 2.5e-06 Prp19 WD40 domain
Beta-prop_WDR3_2nd PF25172 246 - 368 3.8e-11 WDR3 second beta-propeller domain
Beta-prop_SCAP PF24017 252 - 335 3.9e-11 SCAP Beta-propeller
Beta-prop_THOC3 PF25174 267 - 410 2.4e-16 THOC3 beta-propeller domain
WD40_Prp19 PF24814 268 - 408 6.5e-12 Prp19 WD40 domain
WD40 PF00400 286 - 320 4.9e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000488)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25440 AT4G25440 AT4G25440 AT5G51980 AT5G51980
fragaria_vesca FvH4_2g11580 FvH4_3g29280 FvH4_4g05980 FvH4_7g28880 FvH4_7g28880
malus_domestica MD01G1195600.v1.1 MD02G1195200.v1.1 MD07G1262400.v1.1
prunus_persica Prupe.2G102200_v2.0.a1 Prupe.2G102200_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G288900_v2.0.a1
pyrus_communis pycom01g20620 pycom02g15900 pycom07g24140
rosa_chinensis RchiOBHm_Chr1g0376561 RchiOBHm_Chr3g0483051 RchiOBHm_Chr3g0483061 RchiOBHm_Chr3g0483601 RchiOBHm_Chr3g0483611 RchiOBHm_Chr4g0402321 RchiOBHm_Chr6g0270771
rosa_laevigata RLG00000009464 RLG00000009486 RLG00000013770 RLG00000023264 RLG00000023325 RLG00000026601 RLG00000035049
rosa_multiflora Rmu_co8110388.1_g000001 Rmu_co8419409.1_g000001 Rmu_sc0000555.1_g000012 Rmu_sc0000642.1_g000020 Rmu_sc0001308.1_g000010 Rmu_sc0002963.1_g000021 Rmu_sc0004788.1_g000012 Rmu_sc0005594.1_g000015 Rmu_sc0022770.1_g000001
rosa_roxburghii Rroxscaffold_4G00282000 Rroxscaffold_5G00341940 Rroxscaffold_5G00341950 Rroxscaffold_6G00398950 Rroxscaffold_7G00197610
rosa_rugosa Rorug01G0396500 Rorug03G0207400 Rorug03G0346000 Rorug04G0166800 Rorug06G0056400 Rorug06G0056500
rosa_samantha Rh1AG412700 Rh1BG372400 Rh1BG372600 Rh1CG386200 Rh1CG386500 Rh1DG403300 Rh1DG403500 Rh3AG255500 Rh3AG255600 Rh3BG292600 Rh3CG290200 Rh3DG278800 Rh3DG286100 Rh4AG075500 Rh4AG111600 Rh4BG071900 Rh4BG072100 Rh4BG231300 Rh4CG080200 Rh4CG080300 Rh4DG069300 Rh4DG069500 Rh6AG175700 Rh6BG178900 Rh6CG175200 Rh6DG167500
rosa_wichuraiana Rw1G036190 Rw3G023110 Rw4G006070 Rw6G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 621, 1058, 1088
AatII GACGTC 1 cut(s) 899
Acc36I ACCTGC 2 cut(s) 73, 1243
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 3 cut(s) 242, 315, 506
AccB7I CCANNNNNTGG 1 cut(s) 637
AccII CGCG 1 cut(s) 95
AciI CCGC 2 cut(s) 552, 1093
AclWI GGATC 1 cut(s) 52
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 2 cut(s) 19, 599
AcuI CTGAAG 2 cut(s) 1026, 1068
AcyI GRCGYC 1 cut(s) 896
AfaI GTAC 1 cut(s) 244
AfiI CCNNNNNNNGG 3 cut(s) 385, 637, 745
AgsI TTSAA 2 cut(s) 986, 1163
AjnI CCWGG 2 cut(s) 575, 1171
AluBI AGCT 1 cut(s) 370
AluI AGCT 1 cut(s) 370
Alw26I GTCTC 2 cut(s) 431, 903
AlwI GGATC 1 cut(s) 52
AlwNI CAGNNNCTG 1 cut(s) 815
AoxI GGCC 5 cut(s) 264, 376, 573, 757, 1168
ApeKI GCWGC 4 cut(s) 437, 486, 519, 767
ApoI RAATTY 2 cut(s) 19, 599
Asp718I GGTACC 1 cut(s) 242
AspLEI GCGC 1 cut(s) 95
AspS9I GGNCC 4 cut(s) 614, 820, 912, 1169
AsuC2I CCSGG 1 cut(s) 143
AsuHPI GGTGA 2 cut(s) 491, 728
AvaII GGWCC 3 cut(s) 614, 820, 912
AxyI CCTNAGG 1 cut(s) 411
BaeGI GKGCMC 1 cut(s) 320
BalI TGGCCA 1 cut(s) 759
BanI GGYRCC 3 cut(s) 242, 315, 506
BbsI GAAGAC 4 cut(s) 67, 1010, 1017, 1056
BbvI GCAGC 4 cut(s) 424, 498, 506, 754
BccI CCATC 4 cut(s) 91, 287, 341, 1117
BciT130I CCWGG 2 cut(s) 577, 1173
BcnI CCSGG 1 cut(s) 143
BcoDI GTCTC 2 cut(s) 431, 903
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 1 cut(s) 1236
BfuAI ACCTGC 2 cut(s) 73, 1243
BisI GCNGC 4 cut(s) 438, 487, 520, 768
BlsI GCNGC 4 cut(s) 439, 488, 521, 769
Bme1390I CCNGG 3 cut(s) 143, 577, 1173
Bme18I GGWCC 3 cut(s) 614, 820, 912
BmgT120I GGNCC 4 cut(s) 614, 820, 912, 1169
BmiI GGNNCC 7 cut(s) 128, 244, 317, 338, 451, 508, 1233
BmrFI CCNGG 3 cut(s) 143, 577, 1173
BmrI ACTGGG 1 cut(s) 1200
BmsI GCATC 5 cut(s) 95, 206, 706, 877, 1033
BmuI ACTGGG 1 cut(s) 1200
BpiI GAAGAC 4 cut(s) 67, 1010, 1017, 1056
BpmI CTGGAG 1 cut(s) 1194
BpuEI CTTGAG 1 cut(s) 95
BpuMI CCSGG 1 cut(s) 143
BsaHI GRCGYC 1 cut(s) 896
BsaJI CCNNGG 5 cut(s) 340, 360, 373, 636, 1171
BsaWI WCCGGW 1 cut(s) 395
Bsc4I CCNNNNNNNGG 3 cut(s) 385, 637, 745
Bse118I RCCGGY 1 cut(s) 123
Bse1I ACTGG 4 cut(s) 481, 1058, 1195, 1207
Bse21I CCTNAGG 1 cut(s) 411
BseBI CCWGG 2 cut(s) 577, 1173
BseDI CCNNGG 5 cut(s) 340, 360, 373, 636, 1171
BseGI GGATG 2 cut(s) 1109, 1201
BseLI CCNNNNNNNGG 3 cut(s) 385, 637, 745
BseMII CTCAG 3 cut(s) 402, 766, 822
BseNI ACTGG 4 cut(s) 481, 1058, 1195, 1207
BseRI GAGGAG 3 cut(s) 185, 188, 689
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 4 cut(s) 424, 498, 506, 754
BseYI CCCAGC 1 cut(s) 665
Bsh1236I CGCG 1 cut(s) 95
BshFI GGCC 5 cut(s) 266, 378, 575, 759, 1170
BshNI GGYRCC 3 cut(s) 242, 315, 506
BsiSI CCGG 3 cut(s) 124, 143, 396
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 3 cut(s) 385, 637, 745
BsmAI GTCTC 2 cut(s) 431, 903
BsmBI CGTCTC 1 cut(s) 903
BsmFI GGGAC 1 cut(s) 479
BsmI GAATGC 2 cut(s) 488, 1041
BsnI GGCC 5 cut(s) 266, 378, 575, 759, 1170
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 2 cut(s) 44, 924
Bsp19I CCATGG 1 cut(s) 636
BspACI CCGC 2 cut(s) 552, 1093
BspANI GGCC 5 cut(s) 266, 378, 575, 759, 1170
BspCNI CTCAG 3 cut(s) 403, 765, 821
BspFNI CGCG 1 cut(s) 95
BspLI GGNNCC 7 cut(s) 128, 244, 317, 338, 451, 508, 1233
BspMAI CTGCAG 1 cut(s) 1240
BspMI ACCTGC 2 cut(s) 73, 1243
BspPI GGATC 1 cut(s) 52
BspT107I GGYRCC 3 cut(s) 242, 315, 506
BsrFI RCCGGY 1 cut(s) 123
BsrI ACTGG 4 cut(s) 481, 1058, 1195, 1207
BssAI RCCGGY 1 cut(s) 123
BssECI CCNNGG 5 cut(s) 340, 360, 373, 636, 1171
BssMI GATC 2 cut(s) 44, 924
BssNI GRCGYC 1 cut(s) 896
BssT1I CCWWGG 3 cut(s) 360, 373, 636
Bst2UI CCWGG 2 cut(s) 577, 1173
Bst4CI ACNGT 6 cut(s) 79, 214, 332, 454, 460, 1016
BstACI GRCGYC 1 cut(s) 896
BstAPI GCANNNNNTGC 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 517
BstDEI CTNAG 3 cut(s) 411, 752, 808
BstDSI CCRYGG 2 cut(s) 340, 636
BstENI CCTNNNNNAGG 1 cut(s) 743
BstF5I GGATG 2 cut(s) 1109, 1201
BstFNI CGCG 1 cut(s) 95
BstHHI GCGC 1 cut(s) 95
BstKTI GATC 2 cut(s) 47, 927
BstMAI GTCTC 2 cut(s) 431, 903
BstMBI GATC 2 cut(s) 44, 924
BstMWI GCNNNNNNNGC 1 cut(s) 90
BstNI CCWGG 2 cut(s) 577, 1173
BstSCI CCNGG 3 cut(s) 141, 575, 1171
BstSFI CTRYAG 1 cut(s) 1236
BstSLI GKGCMC 1 cut(s) 320
BstUI CGCG 1 cut(s) 95
BstV1I GCAGC 4 cut(s) 424, 498, 506, 754
BstV2I GAAGAC 4 cut(s) 67, 1010, 1017, 1056
BstX2I RGATCY 1 cut(s) 44
BstYI RGATCY 1 cut(s) 44
Bsu36I CCTNAGG 1 cut(s) 411
BsuRI GGCC 5 cut(s) 266, 378, 575, 759, 1170
BtgI CCRYGG 2 cut(s) 340, 636
BtgZI GCGATG 1 cut(s) 110
BtsCI GGATG 2 cut(s) 1109, 1201
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 5 cut(s) 474, 760, 762, 1002, 1188
BveI ACCTGC 2 cut(s) 73, 1243
Cac8I GCNNGC 1 cut(s) 517
CaiI CAGNNNCTG 1 cut(s) 815
CfoI GCGC 1 cut(s) 95
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 4 cut(s) 614, 820, 912, 1169
Csp6I GTAC 1 cut(s) 243
CviAII CATG 4 cut(s) 632, 637, 930, 1040
CviQI GTAC 1 cut(s) 243
DdeI CTNAG 3 cut(s) 411, 752, 808
DpnI GATC 2 cut(s) 46, 926
DpnII GATC 2 cut(s) 44, 924
DrdI GACNNNNNNGTC 3 cut(s) 621, 1058, 1088
DseDI GACNNNNNNGTC 3 cut(s) 621, 1058, 1088
EaeI YGGCCR 1 cut(s) 757
Eco130I CCWWGG 3 cut(s) 360, 373, 636
Eco147I AGGCCT 1 cut(s) 575
Eco47I GGWCC 3 cut(s) 614, 820, 912
Eco57I CTGAAG 2 cut(s) 1026, 1068
Eco81I CCTNAGG 1 cut(s) 411
EcoNI CCTNNNNNAGG 1 cut(s) 743
EcoO109I RGGNCCY 1 cut(s) 1169
EcoRI GAATTC 1 cut(s) 19
EcoRII CCWGG 2 cut(s) 575, 1171
EcoT14I CCWWGG 3 cut(s) 360, 373, 636
EcoT22I ATGCAT 1 cut(s) 1041
ErhI CCWWGG 3 cut(s) 360, 373, 636
Esp3I CGTCTC 1 cut(s) 903
FaeI CATG 4 cut(s) 635, 640, 933, 1043
FalI AAGNNNNNCTT 4 cut(s) 52, 84, 1002, 1034
FaqI GGGAC 1 cut(s) 479
FatI CATG 4 cut(s) 631, 636, 929, 1039
Fnu4HI GCNGC 4 cut(s) 438, 487, 520, 768
FokI GGATG 2 cut(s) 1096, 1208
Fsp4HI GCNGC 4 cut(s) 438, 487, 520, 768
FspBI CTAG 1 cut(s) 608
GlaI GCGC 1 cut(s) 94
GluI GCNGC 4 cut(s) 438, 487, 520, 768
GsaI CCCAGC 1 cut(s) 669
GsuI CTGGAG 1 cut(s) 1194
HaeIII GGCC 5 cut(s) 266, 378, 575, 759, 1170
HapII CCGG 3 cut(s) 124, 143, 396
HhaI GCGC 1 cut(s) 95
Hin1I GRCGYC 1 cut(s) 896
Hin1II CATG 4 cut(s) 635, 640, 933, 1043
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HinfI GANTC 8 cut(s) 27, 154, 203, 587, 727, 841, 868, 1250
HpaII CCGG 3 cut(s) 124, 143, 396
HphI GGTGA 2 cut(s) 491, 728
Hpy166II GTNNAC 3 cut(s) 820, 960, 1208
Hpy188I TCNGA 5 cut(s) 73, 202, 715, 886, 924
Hpy188III TCNNGA 6 cut(s) 24, 112, 410, 845, 1032, 1254
Hpy8I GTNNAC 3 cut(s) 820, 960, 1208
HpyAV CCTTC 3 cut(s) 35, 379, 749
HpyCH4III ACNGT 6 cut(s) 79, 214, 332, 454, 460, 1016
HpyCH4IV ACGT 1 cut(s) 896
HpyCH4V TGCA 9 cut(s) 56, 84, 279, 328, 471, 486, 1039, 1139, 1238
HpyF10VI GCNNNNNNNGC 1 cut(s) 90
HpyF3I CTNAG 3 cut(s) 411, 752, 808
HpySE526I ACGT 1 cut(s) 896
Hsp92I GRCGYC 1 cut(s) 896
Hsp92II CATG 4 cut(s) 635, 640, 933, 1043
HspAI GCGC 1 cut(s) 93
KpnI GGTACC 1 cut(s) 246
Kzo9I GATC 2 cut(s) 44, 924
LmnI GCTCC 1 cut(s) 375
Lsp1109I GCAGC 4 cut(s) 424, 498, 506, 754
LweI GCATC 5 cut(s) 95, 206, 706, 877, 1033
MaeI CTAG 1 cut(s) 608
MaeII ACGT 1 cut(s) 896
MaeIII GTNAC 2 cut(s) 454, 892
MalI GATC 2 cut(s) 46, 926
MboI GATC 2 cut(s) 44, 924
MboII GAAGA 9 cut(s) 72, 348, 998, 1010, 1019, 1022, 1061, 1140, 1177
MflI RGATCY 1 cut(s) 44
MhlI GDGCHC 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 759
MluCI AATT 4 cut(s) 19, 399, 599, 1084
MluNI TGGCCA 1 cut(s) 759
MlyI GAGTC 4 cut(s) 21, 148, 596, 862
MmeI TCCRAC 3 cut(s) 592, 769, 890
Mox20I TGGCCA 1 cut(s) 759
Mph1103I ATGCAT 1 cut(s) 1041
MscI TGGCCA 1 cut(s) 759
MseI TTAA 4 cut(s) 164, 216, 222, 782
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 1 cut(s) 759
MspI CCGG 3 cut(s) 124, 143, 396
MspR9I CCNGG 3 cut(s) 143, 577, 1173
Mva1269I GAATGC 2 cut(s) 488, 1041
MvaI CCWGG 2 cut(s) 577, 1173
MvnI CGCG 1 cut(s) 95
MwoI GCNNNNNNNGC 1 cut(s) 90
NciI CCSGG 1 cut(s) 143
NcoI CCATGG 1 cut(s) 636
NdeII GATC 2 cut(s) 44, 924
NlaIII CATG 4 cut(s) 635, 640, 933, 1043
NlaIV GGNNCC 7 cut(s) 128, 244, 317, 338, 451, 508, 1233
NmuCI GTSAC 1 cut(s) 892
NsiI ATGCAT 1 cut(s) 1041
PceI AGGCCT 1 cut(s) 575
PctI GAATGC 2 cut(s) 488, 1041
PfeI GAWTC 3 cut(s) 203, 727, 841
PflMI CCANNNNNTGG 1 cut(s) 637
PkrI GCNGC 4 cut(s) 439, 488, 521, 769
PleI GAGTC 4 cut(s) 21, 148, 595, 862
PpsI GAGTC 4 cut(s) 21, 148, 595, 862
Psp6I CCWGG 2 cut(s) 575, 1171
PspFI CCCAGC 1 cut(s) 665
PspGI CCWGG 2 cut(s) 575, 1171
PspN4I GGNNCC 7 cut(s) 128, 244, 317, 338, 451, 508, 1233
PspPI GGNCC 4 cut(s) 614, 820, 912, 1169
PstI CTGCAG 1 cut(s) 1240
PstNI CAGNNNCTG 1 cut(s) 815
PsuI RGATCY 1 cut(s) 44
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
RseI CAYNNNNRTG 1 cut(s) 885
SaqAI TTAA 4 cut(s) 164, 216, 222, 782
SatI GCNGC 4 cut(s) 438, 487, 520, 768
Sau3AI GATC 2 cut(s) 44, 924
Sau96I GGNCC 4 cut(s) 614, 820, 912, 1169
SchI GAGTC 4 cut(s) 21, 148, 596, 862
ScrFI CCNGG 3 cut(s) 143, 577, 1173
SduI GDGCHC 1 cut(s) 320
SetI ASST 9 cut(s) 15, 67, 372, 619, 741, 814, 899, 957, 1237
SfaNI GCATC 5 cut(s) 95, 206, 706, 877, 1033
SfcI CTRYAG 1 cut(s) 1236
SinI GGWCC 3 cut(s) 614, 820, 912
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 2 cut(s) 8, 110
SmoI CTYRAG 2 cut(s) 8, 110
Sse9I AATT 4 cut(s) 19, 399, 599, 1084
SseBI AGGCCT 1 cut(s) 575
SsiI CCGC 2 cut(s) 552, 1093
SspI AATATT 1 cut(s) 583
SspMI CTAG 1 cut(s) 608
StuI AGGCCT 1 cut(s) 575
StyD4I CCNGG 3 cut(s) 141, 575, 1171
StyI CCWWGG 3 cut(s) 360, 373, 636
TaaI ACNGT 6 cut(s) 79, 214, 332, 454, 460, 1016
TaiI ACGT 1 cut(s) 899
TaqI TCGA 1 cut(s) 17
TasI AATT 4 cut(s) 19, 399, 599, 1084
TfiI GAWTC 3 cut(s) 203, 727, 841
Tru1I TTAA 4 cut(s) 164, 216, 222, 782
Tru9I TTAA 4 cut(s) 164, 216, 222, 782
TscAI CASTG 5 cut(s) 481, 760, 769, 1009, 1195
TseFI GTSAC 1 cut(s) 892
TseI GCWGC 4 cut(s) 437, 486, 519, 767
Tsp45I GTSAC 1 cut(s) 892
TspDTI ATGAA 2 cut(s) 731, 1212
TspGWI ACGGA 3 cut(s) 329, 462, 1204
TspRI CASTG 5 cut(s) 481, 760, 769, 1009, 1195
Van91I CCANNNNNTGG 1 cut(s) 637
VpaK11BI GGWCC 3 cut(s) 614, 820, 912
XagI CCTNNNNNAGG 1 cut(s) 743
XapI RAATTY 2 cut(s) 19, 599
XspI CTAG 1 cut(s) 608
ZraI GACGTC 1 cut(s) 897
Zsp2I ATGCAT 1 cut(s) 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.