Prupe.2G153300_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000488
Physical Location & Seq
Reverse (-)
20759905 .. 20762744
2840 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G153300.1

Sequence Viewer

Length: 1374 bp
ATGGCCACTAAGGTAGTGAGGAAGCACACCAATAGACCAGAAAGATCAGTGTATGCTCGACCTGCAGGAGGACCTTCAAAAACTGTTTGCGCCTTTTGGGCTGCTGGAAGGTGCACACGGGAATTCTGTCGTTTCCTGCACGCGGATGCACCGCCTTCATCCATGAACCCTCAAATTTCAAAGAAGTCGTCTCTTCTTTGGACGAAGGAAGGAACTGCCACGGGAGAGGGCAATGCATGCAATGCTACTCAGAAAAGCAATGCTCCTCAGAAAATCAATGCTCCTCAAGAAAGCAATGCTGCTCAGACTCAGAAAAGCAATGCTCCTAAGAAAAGCAATGCTCCTCAGAAAAGCAATGCTGCCCAGAAAAGCAATCCTACTCCAAAAAATGTCTGTAAGTTCTGGGTAGATGGAAACTGTGTGAAAGGTGATCGATGCCTGTATTTGCATAACTGGTTCCGTGGTGAGGAGTTCTCCATGTTGGCAAAGCTCCAAGGGCACACGAAGGCTGTCACTGGTATTGCCCTTCCTGAACGAACTAACAAGCTTTATTCAACCAGTAAAGATGGAACAGCCAGAGTTTGGGACTGCCATACTGGTGAATGTGGCAGTGCGATTGATCTTGGTGGTGAAGCAGGTTCTTTAATTAGTGAGGGCCCATGGGTTTTTGCTGGTGTACCAAATCTTGTTAAGGTTTGGAATACTGAGACAAATTCTGAATTCAACCTGGATGGACCTGTTGGCCAAGTGCATGCTATGGTGGTTGGTAATGAAATGCTTTTCGCTGGGACACAGAATGGTGATATATGTGTGTGGAAAGGTAGCACTGAAACTAATCCGCCATTTTATCCTGCTGCAACTCTGAAGGGCCACACTGGTGCTGTGGTATGTTTAACTGTTGGGCGCAACAGGCTTTACTCGGGTTCTGTGGACCATACAATTAAGGTGTGGGACCTTTATACTTTGCAGGGTGTTCTGACACTAAATGGGCATTCTGGTGTGGTGATGTCTCTTCTTTGCTGGGATCAGTTCTTGCTCTCATGCTCACTGGACGACACGATAAAGGTGTGGGCTGCCACTGAAGGAGGTGGTTTGGAAGTGACCTACACTCACAACGAAGAGCAGGGTGTTCTTGATCTTGCCGGAATGACAGATGCAGAAAGCAAGCCAATCTTGCTTTCTTCTTGCAATGATAATTCTGTCCGCATATATGAACTGCCATCATTCACTGAAAGAGGCAGATTATTTGCAAAACAAGAAGTTCGGACCGTCGAGGTAGGACCTGGAGGACTATTCTTCAGTGGGGATGCAACTGGTGTCCTTTCTGTTTGGAAGTGGATGGATCCTCCTGCCGTCAAAGTGGAGTCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04120 map03040 map04120
Pfam Domains
Protein Families
WD40 zf-CCCH

Protein Analysis

458

Amino Acids

49.41

Weight (kDa)

8.13

Isoelectric Point (pI)

30.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000488)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25440 AT4G25440 AT4G25440 AT5G51980 AT5G51980
fragaria_vesca FvH4_2g11580 FvH4_3g29280 FvH4_4g05980 FvH4_7g28880 FvH4_7g28880
malus_domestica MD01G1195600.v1.1 MD02G1195200.v1.1 MD07G1262400.v1.1
prunus_persica Prupe.2G102200_v2.0.a1 Prupe.2G102200_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G288900_v2.0.a1
pyrus_communis pycom01g20620 pycom02g15900 pycom07g24140
rosa_chinensis RchiOBHm_Chr1g0376561 RchiOBHm_Chr3g0483051 RchiOBHm_Chr3g0483061 RchiOBHm_Chr3g0483601 RchiOBHm_Chr3g0483611 RchiOBHm_Chr4g0402321 RchiOBHm_Chr6g0270771
rosa_laevigata RLG00000009464 RLG00000009486 RLG00000013770 RLG00000023264 RLG00000023325 RLG00000026601 RLG00000035049
rosa_multiflora Rmu_co8110388.1_g000001 Rmu_co8419409.1_g000001 Rmu_sc0000555.1_g000012 Rmu_sc0000642.1_g000020 Rmu_sc0001308.1_g000010 Rmu_sc0002963.1_g000021 Rmu_sc0004788.1_g000012 Rmu_sc0005594.1_g000015 Rmu_sc0022770.1_g000001
rosa_roxburghii Rroxscaffold_4G00282000 Rroxscaffold_5G00341940 Rroxscaffold_5G00341950 Rroxscaffold_6G00398950 Rroxscaffold_7G00197610
rosa_rugosa Rorug01G0396500 Rorug03G0207400 Rorug03G0346000 Rorug04G0166800 Rorug06G0056400 Rorug06G0056500
rosa_samantha Rh1AG412700 Rh1BG372400 Rh1BG372600 Rh1CG386200 Rh1CG386500 Rh1DG403300 Rh1DG403500 Rh3AG255500 Rh3AG255600 Rh3BG292600 Rh3CG290200 Rh3DG278800 Rh3DG286100 Rh4AG075500 Rh4AG111600 Rh4BG071900 Rh4BG072100 Rh4BG231300 Rh4CG080200 Rh4CG080300 Rh4DG069300 Rh4DG069500 Rh6AG175700 Rh6BG178900 Rh6CG175200 Rh6DG167500
rosa_wichuraiana Rw1G036190 Rw3G023110 Rw4G006070 Rw6G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 70, 626
AccB7I CCANNNNNTGG 1 cut(s) 582
AccII CGCG 1 cut(s) 143
AciI CCGC 4 cut(s) 143, 152, 839, 1204
AclWI GGATC 3 cut(s) 1032, 1337, 1350
AcoI YGGCCR 2 cut(s) 3, 742
AcsI RAATTY 4 cut(s) 122, 174, 712, 719
AcuI CTGAAG 3 cut(s) 884, 1101, 1282
AfaI GTAC 1 cut(s) 678
AfiI CCNNNNNNNGG 4 cut(s) 68, 142, 466, 582
AgsI TTSAA 4 cut(s) 78, 180, 555, 724
AjnI CCWGG 2 cut(s) 726, 1282
AjuI GAANNNNNNNTTGG 2 cut(s) 1162, 1194
AleI CACNNNNGTG 1 cut(s) 876
AluBI AGCT 2 cut(s) 490, 547
AluI AGCT 2 cut(s) 490, 547
Alw21I GWGCWC 1 cut(s) 116
Alw26I GTCTC 3 cut(s) 195, 701, 1014
Alw44I GTGCAC 1 cut(s) 112
AlwI GGATC 3 cut(s) 1032, 1337, 1350
Ama87I CYCGRG 1 cut(s) 919
AoxI GGCC 4 cut(s) 3, 655, 742, 868
ApaI GGGCCC 1 cut(s) 659
ApaLI GTGCAC 1 cut(s) 112
ApeKI GCWGC 5 cut(s) 101, 299, 359, 854, 1073
ApoI RAATTY 4 cut(s) 122, 174, 712, 719
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
AspLEI GCGC 2 cut(s) 92, 906
AspS9I GGNCC 9 cut(s) 71, 655, 656, 734, 868, 931, 952, 1266, 1280
AsuHPI GGTGA 6 cut(s) 440, 476, 611, 641, 812, 1015
AvaI CYCGRG 1 cut(s) 919
AvaII GGWCC 6 cut(s) 71, 734, 931, 952, 1266, 1280
BaeGI GKGCMC 3 cut(s) 116, 501, 659
BalI TGGCCA 2 cut(s) 5, 744
BamHI GGATCC 1 cut(s) 1342
BanII GRGCYC 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 1359
Bbv12I GWGCWC 1 cut(s) 116
BbvI GCAGC 5 cut(s) 88, 286, 346, 841, 1060
BccI CCATC 5 cut(s) 404, 560, 725, 1228, 1333
BceAI ACGGC 1 cut(s) 1337
BciT130I CCWGG 2 cut(s) 728, 1284
BcoDI GTCTC 3 cut(s) 195, 701, 1014
BfmI CTRYAG 1 cut(s) 63
BfuAI ACCTGC 2 cut(s) 70, 626
BglI GCCNNNNNGGC 1 cut(s) 98
BisI GCNGC 5 cut(s) 102, 300, 360, 855, 1074
BlsI GCNGC 5 cut(s) 103, 301, 361, 856, 1075
Bme1390I CCNGG 2 cut(s) 728, 1284
Bme18I GGWCC 6 cut(s) 71, 734, 931, 952, 1266, 1280
BmeT110I CYCGRG 1 cut(s) 919
BmgT120I GGNCC 9 cut(s) 71, 655, 656, 734, 868, 931, 952, 1266, 1280
BmiI GGNNCC 4 cut(s) 458, 657, 953, 1344
BmrFI CCNGG 2 cut(s) 728, 1284
BmsI GCATC 4 cut(s) 136, 425, 1144, 1297
BpiI GAAGAC 1 cut(s) 1359
BplI GAGNNNNNCTC 2 cut(s) 458, 490
BpmI CTGGAG 1 cut(s) 1305
BpuEI CTTGAG 1 cut(s) 270
Bsa29I ATCGAT 1 cut(s) 433
BsaJI CCNNGG 4 cut(s) 219, 460, 493, 659
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 142, 466, 582
Bse1I ACTGG 7 cut(s) 458, 520, 558, 601, 880, 1053, 1318
Bse3DI GCAATG 8 cut(s) 238, 247, 265, 301, 325, 343, 361, 1195
BseBI CCWGG 2 cut(s) 728, 1284
BseCI ATCGAT 1 cut(s) 433
BseDI CCNNGG 4 cut(s) 219, 460, 493, 659
BseGI GGATG 5 cut(s) 151, 158, 736, 1312, 1344
BseLI CCNNNNNNNGG 4 cut(s) 68, 142, 466, 582
BseMI GCAATG 8 cut(s) 238, 247, 265, 301, 325, 343, 361, 1195
BseMII CTCAG 6 cut(s) 263, 281, 317, 323, 359, 696
BseNI ACTGG 7 cut(s) 458, 520, 558, 601, 880, 1053, 1318
BseRI GAGGAG 4 cut(s) 255, 273, 333, 482
BseSI GKGCMC 3 cut(s) 116, 501, 659
BseXI GCAGC 5 cut(s) 88, 286, 346, 841, 1060
BseYI CCCAGC 2 cut(s) 785, 1020
BsgI GTGCAG 1 cut(s) 122
Bsh1236I CGCG 1 cut(s) 143
BshFI GGCC 4 cut(s) 5, 657, 744, 870
BshVI ATCGAT 1 cut(s) 433
BsiHKAI GWGCWC 1 cut(s) 116
BsiHKCI CYCGRG 1 cut(s) 919
BsiSI CCGG 1 cut(s) 1143
BslFI GGGAC 3 cut(s) 599, 802, 965
BslI CCNNNNNNNGG 4 cut(s) 68, 142, 466, 582
BsmAI GTCTC 3 cut(s) 195, 701, 1014
BsmBI CGTCTC 1 cut(s) 195
BsmFI GGGAC 3 cut(s) 599, 802, 965
BsmI GAATGC 1 cut(s) 991
BsnI GGCC 4 cut(s) 5, 657, 744, 870
BsoBI CYCGRG 1 cut(s) 919
Bsp120I GGGCCC 1 cut(s) 655
Bsp1286I GDGCHC 3 cut(s) 116, 501, 659
Bsp143I GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
Bsp19I CCATGG 1 cut(s) 659
BspACI CCGC 4 cut(s) 143, 152, 839, 1204
BspANI GGCC 4 cut(s) 5, 657, 744, 870
BspCNI CTCAG 6 cut(s) 262, 280, 316, 322, 358, 697
BspDI ATCGAT 1 cut(s) 433
BspFNI CGCG 1 cut(s) 143
BspHI TCATGA 1 cut(s) 1370
BspLI GGNNCC 4 cut(s) 458, 657, 953, 1344
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 2 cut(s) 70, 626
BspPI GGATC 3 cut(s) 1032, 1337, 1350
BspQI GCTCTTC 1 cut(s) 1113
BsrDI GCAATG 8 cut(s) 238, 247, 265, 301, 325, 343, 361, 1195
BsrI ACTGG 7 cut(s) 458, 520, 558, 601, 880, 1053, 1318
BssECI CCNNGG 4 cut(s) 219, 460, 493, 659
BssMI GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
BssT1I CCWWGG 2 cut(s) 493, 659
Bst2UI CCWGG 2 cut(s) 728, 1284
Bst4CI ACNGT 4 cut(s) 85, 419, 898, 1270
Bst6I CTCTTC 3 cut(s) 198, 1017, 1113
BstAPI GCANNNNNTGC 2 cut(s) 237, 242
BstC8I GCNNGC 4 cut(s) 141, 238, 753, 1166
BstDEI CTNAG 8 cut(s) 9, 249, 267, 303, 309, 327, 345, 705
BstDSI CCRYGG 3 cut(s) 219, 460, 659
BstENI CCTNNNNNAGG 1 cut(s) 66
BstF5I GGATG 5 cut(s) 151, 158, 736, 1312, 1344
BstFNI CGCG 1 cut(s) 143
BstHHI GCGC 2 cut(s) 92, 906
BstKTI GATC 6 cut(s) 47, 433, 622, 1027, 1138, 1345
BstMAI GTCTC 3 cut(s) 195, 701, 1014
BstMBI GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
BstMWI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 496, 910, 1174
BstNI CCWGG 2 cut(s) 728, 1284
BstNSI RCATGY 2 cut(s) 240, 755
BstSCI CCNGG 2 cut(s) 726, 1282
BstSFI CTRYAG 1 cut(s) 63
BstSLI GKGCMC 3 cut(s) 116, 501, 659
BstUI CGCG 1 cut(s) 143
BstV1I GCAGC 5 cut(s) 88, 286, 346, 841, 1060
BstV2I GAAGAC 1 cut(s) 1359
BstX2I RGATCY 1 cut(s) 1342
BstYI RGATCY 1 cut(s) 1342
Bsu15I ATCGAT 1 cut(s) 433
BsuRI GGCC 4 cut(s) 5, 657, 744, 870
BsuTUI ATCGAT 1 cut(s) 433
BtgI CCRYGG 3 cut(s) 219, 460, 659
BtsCI GGATG 5 cut(s) 151, 158, 736, 1312, 1344
BtsI GCAGTG 1 cut(s) 616
BtsIMutI CAGTG 9 cut(s) 54, 513, 616, 825, 873, 1046, 1077, 1227, 1306
BveI ACCTGC 2 cut(s) 70, 626
Cac8I GCNNGC 4 cut(s) 141, 238, 753, 1166
CciI TCATGA 1 cut(s) 1370
CfoI GCGC 2 cut(s) 92, 906
Cfr13I GGNCC 9 cut(s) 71, 655, 656, 734, 868, 931, 952, 1266, 1280
ClaI ATCGAT 1 cut(s) 433
CpoI CGGWCCG 1 cut(s) 1266
Csp6I GTAC 1 cut(s) 677
CspI CGGWCCG 1 cut(s) 1266
CviAII CATG 7 cut(s) 163, 237, 478, 660, 752, 1041, 1371
CviQI GTAC 1 cut(s) 677
DdeI CTNAG 8 cut(s) 9, 249, 267, 303, 309, 327, 345, 705
DpnI GATC 6 cut(s) 46, 432, 621, 1026, 1137, 1344
DpnII GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
EaeI YGGCCR 2 cut(s) 3, 742
Eam1104I CTCTTC 3 cut(s) 198, 1017, 1113
EarI CTCTTC 3 cut(s) 198, 1017, 1113
EciI GGCGGA 1 cut(s) 828
Eco130I CCWWGG 2 cut(s) 493, 659
Eco24I GRGCYC 1 cut(s) 659
Eco47I GGWCC 6 cut(s) 71, 734, 931, 952, 1266, 1280
Eco57I CTGAAG 3 cut(s) 884, 1101, 1282
Eco88I CYCGRG 1 cut(s) 919
EcoNI CCTNNNNNAGG 1 cut(s) 66
EcoO109I RGGNCCY 4 cut(s) 71, 655, 952, 1280
EcoRI GAATTC 2 cut(s) 122, 719
EcoRII CCWGG 2 cut(s) 726, 1282
EcoT14I CCWWGG 2 cut(s) 493, 659
EcoT22I ATGCAT 1 cut(s) 238
EcoT38I GRGCYC 1 cut(s) 659
ErhI CCWWGG 2 cut(s) 493, 659
Esp3I CGTCTC 1 cut(s) 195
FaeI CATG 7 cut(s) 166, 240, 481, 663, 755, 1044, 1374
FalI AAGNNNNNCTT 2 cut(s) 1157, 1189
FaqI GGGAC 3 cut(s) 599, 802, 965
FatI CATG 7 cut(s) 162, 236, 477, 659, 751, 1040, 1370
Fnu4HI GCNGC 5 cut(s) 102, 300, 360, 855, 1074
FokI GGATG 5 cut(s) 145, 158, 743, 1319, 1351
FriOI GRGCYC 1 cut(s) 659
Fsp4HI GCNGC 5 cut(s) 102, 300, 360, 855, 1074
GlaI GCGC 2 cut(s) 91, 905
GluI GCNGC 5 cut(s) 102, 300, 360, 855, 1074
GsaI CCCAGC 2 cut(s) 789, 1024
GsuI CTGGAG 1 cut(s) 1305
HaeIII GGCC 4 cut(s) 5, 657, 744, 870
HapII CCGG 1 cut(s) 1143
HhaI GCGC 2 cut(s) 92, 906
Hin1II CATG 7 cut(s) 166, 240, 481, 663, 755, 1044, 1374
Hin6I GCGC 2 cut(s) 90, 904
HinP1I GCGC 2 cut(s) 90, 904
HindIII AAGCTT 1 cut(s) 545
HinfI GANTC 2 cut(s) 307, 1364
HpaII CCGG 1 cut(s) 1143
HphI GGTGA 6 cut(s) 440, 476, 611, 641, 812, 1015
Hpy166II GTNNAC 3 cut(s) 114, 677, 931
Hpy188I TCNGA 9 cut(s) 252, 270, 306, 312, 348, 718, 864, 978, 1266
Hpy188III TCNNGA 4 cut(s) 287, 530, 1133, 1371
Hpy8I GTNNAC 3 cut(s) 114, 677, 931
Hpy99I CGWCG 1 cut(s) 1274
HpyAV CCTTC 9 cut(s) 84, 102, 165, 199, 203, 499, 536, 859, 1076
HpyCH4III ACNGT 4 cut(s) 85, 419, 898, 1270
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 496, 910, 1174
HpyF3I CTNAG 8 cut(s) 9, 249, 267, 303, 309, 327, 345, 705
Hsp92II CATG 7 cut(s) 166, 240, 481, 663, 755, 1044, 1374
HspAI GCGC 2 cut(s) 90, 904
Kzo9I GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
LguI GCTCTTC 1 cut(s) 1113
LmnI GCTCC 5 cut(s) 268, 286, 328, 346, 495
Lsp1109I GCAGC 5 cut(s) 88, 286, 346, 841, 1060
LweI GCATC 4 cut(s) 136, 425, 1144, 1297
MaeIII GTNAC 2 cut(s) 511, 1099
MalI GATC 6 cut(s) 46, 432, 621, 1026, 1137, 1344
MboI GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
MboII GAAGA 6 cut(s) 185, 1004, 1130, 1173, 1288, 1359
MflI RGATCY 1 cut(s) 1342
MhlI GDGCHC 3 cut(s) 116, 501, 659
MlsI TGGCCA 2 cut(s) 5, 744
MluCI AATT 7 cut(s) 122, 174, 645, 712, 719, 939, 1195
MluNI TGGCCA 2 cut(s) 5, 744
MlyI GAGTC 2 cut(s) 301, 1373
Mox20I TGGCCA 2 cut(s) 5, 744
Mph1103I ATGCAT 1 cut(s) 238
MscI TGGCCA 2 cut(s) 5, 744
MseI TTAA 4 cut(s) 644, 690, 893, 942
MslI CAYNNNNRTG 4 cut(s) 144, 597, 876, 996
Msp20I TGGCCA 2 cut(s) 5, 744
MspI CCGG 1 cut(s) 1143
MspR9I CCNGG 2 cut(s) 728, 1284
Mva1269I GAATGC 1 cut(s) 991
MvaI CCWGG 2 cut(s) 728, 1284
MvnI CGCG 1 cut(s) 143
MwoI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 496, 910, 1174
NcoI CCATGG 1 cut(s) 659
NdeII GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
NlaIII CATG 7 cut(s) 166, 240, 481, 663, 755, 1044, 1374
NlaIV GGNNCC 4 cut(s) 458, 657, 953, 1344
NmuCI GTSAC 2 cut(s) 511, 1099
NsiI ATGCAT 1 cut(s) 238
NspI RCATGY 2 cut(s) 240, 755
OliI CACNNNNGTG 1 cut(s) 876
PaeI GCATGC 2 cut(s) 240, 755
PagI TCATGA 1 cut(s) 1370
PciSI GCTCTTC 1 cut(s) 1113
PctI GAATGC 1 cut(s) 991
PflMI CCANNNNNTGG 1 cut(s) 582
PkrI GCNGC 5 cut(s) 103, 301, 361, 856, 1075
PleI GAGTC 2 cut(s) 301, 1372
PpsI GAGTC 2 cut(s) 301, 1372
PpuMI RGGWCCY 3 cut(s) 71, 952, 1280
Psp5II RGGWCCY 3 cut(s) 71, 952, 1280
Psp6I CCWGG 2 cut(s) 726, 1282
PspFI CCCAGC 2 cut(s) 785, 1020
PspGI CCWGG 2 cut(s) 726, 1282
PspN4I GGNNCC 4 cut(s) 458, 657, 953, 1344
PspOMI GGGCCC 1 cut(s) 655
PspPI GGNCC 9 cut(s) 71, 655, 656, 734, 868, 931, 952, 1266, 1280
PspPPI RGGWCCY 3 cut(s) 71, 952, 1280
PstI CTGCAG 1 cut(s) 67
PsuI RGATCY 1 cut(s) 1342
RsaI GTAC 1 cut(s) 678
RsaNI GTAC 1 cut(s) 677
RseI CAYNNNNRTG 4 cut(s) 144, 597, 876, 996
Rsr2I CGGWCCG 1 cut(s) 1266
RsrII CGGWCCG 1 cut(s) 1266
SapI GCTCTTC 1 cut(s) 1113
SaqAI TTAA 4 cut(s) 644, 690, 893, 942
SatI GCNGC 5 cut(s) 102, 300, 360, 855, 1074
Sau3AI GATC 6 cut(s) 44, 430, 619, 1024, 1135, 1342
Sau96I GGNCC 9 cut(s) 71, 655, 656, 734, 868, 931, 952, 1266, 1280
SbfI CCTGCAGG 1 cut(s) 67
SchI GAGTC 2 cut(s) 301, 1373
ScrFI CCNGG 2 cut(s) 728, 1284
SdaI CCTGCAGG 1 cut(s) 67
SduI GDGCHC 3 cut(s) 116, 501, 659
SfaNI GCATC 4 cut(s) 136, 425, 1144, 1297
SfcI CTRYAG 1 cut(s) 63
SinI GGWCC 6 cut(s) 71, 734, 931, 952, 1266, 1280
SmiMI CAYNNNNRTG 4 cut(s) 144, 597, 876, 996
SmlI CTYRAG 1 cut(s) 285
SmoI CTYRAG 1 cut(s) 285
SphI GCATGC 2 cut(s) 240, 755
Sse8387I CCTGCAGG 1 cut(s) 67
Sse9I AATT 7 cut(s) 122, 174, 645, 712, 719, 939, 1195
SsiI CCGC 4 cut(s) 143, 152, 839, 1204
StyD4I CCNGG 2 cut(s) 726, 1282
StyI CCWWGG 2 cut(s) 493, 659
TaaI ACNGT 4 cut(s) 85, 419, 898, 1270
TaqI TCGA 3 cut(s) 58, 433, 1272
TasI AATT 7 cut(s) 122, 174, 645, 712, 719, 939, 1195
Tru1I TTAA 4 cut(s) 644, 690, 893, 942
Tru9I TTAA 4 cut(s) 644, 690, 893, 942
TscAI CASTG 9 cut(s) 54, 520, 616, 832, 880, 1053, 1084, 1234, 1306
TseFI GTSAC 2 cut(s) 511, 1099
TseI GCWGC 5 cut(s) 101, 299, 359, 854, 1073
Tsp45I GTSAC 2 cut(s) 511, 1099
TspDTI ATGAA 5 cut(s) 147, 179, 786, 1227, 1359
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 9 cut(s) 54, 520, 616, 832, 880, 1053, 1084, 1234, 1306
Van91I CCANNNNNTGG 1 cut(s) 582
VneI GTGCAC 1 cut(s) 112
VpaK11BI GGWCC 6 cut(s) 71, 734, 931, 952, 1266, 1280
XagI CCTNNNNNAGG 1 cut(s) 66
XapI RAATTY 4 cut(s) 122, 174, 712, 719
XceI RCATGY 2 cut(s) 240, 755
Zsp2I ATGCAT 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.