Rroxscaffold_5G00341950

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000488
Physical Location & Seq
Reverse (-)
10652689 .. 10654481
1793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00341950.1

Sequence Viewer

Length: 1245 bp
ATGGCTCTCAGGGTATCGAATTCCAGACTCACAAGGAGAGAAGGATCCGTTTATGCTTCCGAAACCGTCTGCAAGTTTTGGGCGATGGGTAGATGCCTCAAGAAACAGTGCCGGTTCCTACACGCTGACCCGGAACAAAAGACTCTTGCTTTAATGGAGGAGAAGGCCAAGTCTTTGGGGAAAGCATCTGATTCTGCTACTGTTAATGTTAATGTTGAGAAAAGCATTGGTACCCACAAAGAGAAAGCAAAGGCCGAAGCAGTCTGCAAGTTCTGGGCAGATGGGAAGTGTGTTAGACGAGGGTGCCCTTATTTGCACAGTTGGTTCCGTGGAGATGACTTTTCTTCCTTGGCAAAGCTCCAAGGCCATAAGAAGGGGATAACTGGAATTGTGCTTCCAGAGAGAAGCAGCAGTCTCTATTCTGCTGCCAAAGACGGAACCGTTAGGGTTTGGGACTGCAACACTGGTAAATGCAGCAGGGTAATCAATCTTGGCGCCGAAGCAGGGTGCTTGATTAGTAAGGGTATGTGGATTTTCTGCAGTGCTTCCAATCTCGTCAAGGCGTGGAATATTGAGTCCAATGCTGAATTTACCCTAGCTGGACCTGTTGGTCAAATCCATGCCATGGAAGTTGGGAATGATATGGTATTTGCTGGGTCAGAGGAGGGTGTTATATATGTGTGGAAAGGCAAAGCCTGTTCCGATGCTAAAGCGAATCCGTTTCACCCTCATCAGGCTCTCAGTGGCCACACTGCTGCTGTGGTTTCTTTAAAGGTTGGAAATATCAGGCTCTACTCAGGTTCTGTGGACCATACAATCAGGGTGTGGAATCTGGACACTTTGGAGTGTGCTATGACTCTAAATGGACATTCTGATGCTGTGGCGTCTCTTATATGTTGGACCACATTTCTGATCTCATGCTCATTAGACCACACGATAAAGGTGTGGACTATGTGTAAAGGAGGCAACATTGAAGAAATCTACACTCACACTGAAGAAGACGGTCTTCTTGCTCTCTCTGGAATGCATGATGCTGAAGACAAACCAGTCCTACTTTGCTCATCAAAAGACAATTCTGTCTGCATATATGATTTGCCATCCTTTGATGAGAGGGGAAGATTATTTGCAAAACGGGAAGTTCGGGCTATTCAAGTAGGCCCTGGAGGACTATTCTTTACTGGGGATGAAACTGGTGGACTTTCCGTGTGGAAGTGGTTGGAACCTGCAGTCAAACAAGAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04120 map03040 map04120
Pfam Domains
Protein Families
WD40 zf-CCCH

Protein Analysis

414

Amino Acids

45.29

Weight (kDa)

8.06

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 89 - 162 4.7e-08 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 113 - 164 4.7e-06 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 116 - 162 1.3e-07 WDR3 first beta-propeller domain
WD40 PF00400 116 - 152 3.2e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 116 - 163 4.8e-06 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 117 - 259 1.9e-10 THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 169 - 365 8.9e-06 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 178 - 333 1.8e-19 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 178 - 405 2.3e-10 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 180 - 365 1.1e-17 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 181 - 331 3.3e-11 CDC20/Fizzy WD40 domain
Beta-prop_IP5PC_F PF23754 208 - 299 1.1e-07 IP5P C-F beta-propeller
Beta-prop_WDR3_2nd PF25172 244 - 318 2.2e-08 WDR3 second beta-propeller domain
Beta-prop_SCAP PF24017 248 - 333 2.4e-10 SCAP Beta-propeller
WD40_Prp19 PF24814 263 - 404 2.2e-11 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 263 - 406 8.1e-16 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 264 - 332 9.3e-07 TEP-1 second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000488)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25440 AT4G25440 AT4G25440 AT5G51980 AT5G51980
fragaria_vesca FvH4_2g11580 FvH4_3g29280 FvH4_4g05980 FvH4_7g28880 FvH4_7g28880
malus_domestica MD01G1195600.v1.1 MD02G1195200.v1.1 MD07G1262400.v1.1
prunus_persica Prupe.2G102200_v2.0.a1 Prupe.2G102200_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G288900_v2.0.a1
pyrus_communis pycom01g20620 pycom02g15900 pycom07g24140
rosa_chinensis RchiOBHm_Chr1g0376561 RchiOBHm_Chr3g0483051 RchiOBHm_Chr3g0483061 RchiOBHm_Chr3g0483601 RchiOBHm_Chr3g0483611 RchiOBHm_Chr4g0402321 RchiOBHm_Chr6g0270771
rosa_laevigata RLG00000009464 RLG00000009486 RLG00000013770 RLG00000023264 RLG00000023325 RLG00000026601 RLG00000035049
rosa_multiflora Rmu_co8110388.1_g000001 Rmu_co8419409.1_g000001 Rmu_sc0000555.1_g000012 Rmu_sc0000642.1_g000020 Rmu_sc0001308.1_g000010 Rmu_sc0002963.1_g000021 Rmu_sc0004788.1_g000012 Rmu_sc0005594.1_g000015 Rmu_sc0022770.1_g000001
rosa_roxburghii Rroxscaffold_4G00282000 Rroxscaffold_5G00341940 Rroxscaffold_5G00341950 Rroxscaffold_6G00398950 Rroxscaffold_7G00197610
rosa_rugosa Rorug01G0396500 Rorug03G0207400 Rorug03G0346000 Rorug04G0166800 Rorug06G0056400 Rorug06G0056500
rosa_samantha Rh1AG412700 Rh1BG372400 Rh1BG372600 Rh1CG386200 Rh1CG386500 Rh1DG403300 Rh1DG403500 Rh3AG255500 Rh3AG255600 Rh3BG292600 Rh3CG290200 Rh3DG278800 Rh3DG286100 Rh4AG075500 Rh4AG111600 Rh4BG071900 Rh4BG072100 Rh4BG231300 Rh4CG080200 Rh4CG080300 Rh4DG069300 Rh4DG069500 Rh6AG175700 Rh6BG178900 Rh6CG175200 Rh6DG167500
rosa_wichuraiana Rw1G036190 Rw3G023110 Rw4G006070 Rw6G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 609, 1046, 1076
Acc36I ACCTGC 1 cut(s) 1231
Acc65I GGTACC 1 cut(s) 230
AccB1I GGYRCC 3 cut(s) 230, 303, 494
AccB7I CCANNNNNTGG 1 cut(s) 625
AclWI GGATC 2 cut(s) 39, 52
AcoI YGGCCR 1 cut(s) 745
AcsI RAATTY 2 cut(s) 19, 587
AcuI CTGAAG 2 cut(s) 1014, 1056
AcyI GRCGYC 2 cut(s) 495, 884
AfaI GTAC 1 cut(s) 232
AfiI CCNNNNNNNGG 4 cut(s) 373, 504, 625, 733
AgsI TTSAA 2 cut(s) 974, 1151
AjnI CCWGG 1 cut(s) 1159
AluBI AGCT 2 cut(s) 358, 599
AluI AGCT 2 cut(s) 358, 599
Alw26I GTCTC 2 cut(s) 419, 891
AlwI GGATC 2 cut(s) 39, 52
AlwNI CAGNNNCTG 1 cut(s) 803
AoxI GGCC 5 cut(s) 165, 252, 364, 745, 1156
ApeKI GCWGC 4 cut(s) 408, 425, 474, 755
ApoI RAATTY 2 cut(s) 19, 587
Asp718I GGTACC 1 cut(s) 230
AspLEI GCGC 1 cut(s) 497
AspS9I GGNCC 4 cut(s) 602, 808, 900, 1157
AsuC2I CCSGG 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 716
AvaII GGWCC 3 cut(s) 602, 808, 900
BaeGI GKGCMC 1 cut(s) 308
BalI TGGCCA 1 cut(s) 747
BamHI GGATCC 1 cut(s) 44
BanI GGYRCC 3 cut(s) 230, 303, 494
BbsI GAAGAC 3 cut(s) 998, 1005, 1044
BbvI GCAGC 4 cut(s) 412, 420, 486, 742
BccI CCATC 3 cut(s) 79, 275, 1105
BciT130I CCWGG 1 cut(s) 1161
BcnI CCSGG 1 cut(s) 131
BcoDI GTCTC 2 cut(s) 419, 891
BfaI CTAG 1 cut(s) 596
BfmI CTRYAG 2 cut(s) 538, 1224
BfoI RGCGCY 1 cut(s) 498
BfuAI ACCTGC 1 cut(s) 1231
BisI GCNGC 4 cut(s) 409, 426, 475, 756
BlsI GCNGC 4 cut(s) 410, 427, 476, 757
Bme1390I CCNGG 2 cut(s) 131, 1161
Bme18I GGWCC 3 cut(s) 602, 808, 900
BmgT120I GGNCC 4 cut(s) 602, 808, 900, 1157
BmiI GGNNCC 8 cut(s) 46, 116, 232, 305, 326, 439, 496, 1221
BmrFI CCNGG 2 cut(s) 131, 1161
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 5 cut(s) 83, 194, 694, 865, 1021
BmuI ACTGGG 1 cut(s) 1188
BpiI GAAGAC 3 cut(s) 998, 1005, 1044
BpmI CTGGAG 1 cut(s) 1182
BpuEI CTTGAG 1 cut(s) 83
BpuMI CCSGG 1 cut(s) 131
BsaHI GRCGYC 2 cut(s) 495, 884
BsaJI CCNNGG 5 cut(s) 328, 348, 361, 624, 1159
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 504, 625, 733
Bse118I RCCGGY 1 cut(s) 111
Bse1I ACTGG 5 cut(s) 388, 469, 1046, 1183, 1195
BseBI CCWGG 1 cut(s) 1161
BseDI CCNNGG 5 cut(s) 328, 348, 361, 624, 1159
BseGI GGATG 2 cut(s) 1097, 1189
BseLI CCNNNNNNNGG 4 cut(s) 373, 504, 625, 733
BseMII CTCAG 3 cut(s) 22, 754, 810
BseNI ACTGG 5 cut(s) 388, 469, 1046, 1183, 1195
BseRI GAGGAG 2 cut(s) 173, 677
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 4 cut(s) 412, 420, 486, 742
BseYI CCCAGC 1 cut(s) 653
BshFI GGCC 5 cut(s) 167, 254, 366, 747, 1158
BshNI GGYRCC 3 cut(s) 230, 303, 494
BsiSI CCGG 2 cut(s) 112, 131
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 4 cut(s) 373, 504, 625, 733
BsmAI GTCTC 2 cut(s) 419, 891
BsmBI CGTCTC 1 cut(s) 891
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 1029
BsnI GGCC 5 cut(s) 167, 254, 366, 747, 1158
Bsp1286I GDGCHC 1 cut(s) 308
Bsp143I GATC 2 cut(s) 44, 912
Bsp19I CCATGG 1 cut(s) 624
BspANI GGCC 5 cut(s) 167, 254, 366, 747, 1158
BspCNI CTCAG 3 cut(s) 21, 753, 809
BspLI GGNNCC 8 cut(s) 46, 116, 232, 305, 326, 439, 496, 1221
BspMAI CTGCAG 2 cut(s) 542, 1228
BspMI ACCTGC 1 cut(s) 1231
BspPI GGATC 2 cut(s) 39, 52
BspT107I GGYRCC 3 cut(s) 230, 303, 494
BsrFI RCCGGY 1 cut(s) 111
BsrI ACTGG 5 cut(s) 388, 469, 1046, 1183, 1195
BssAI RCCGGY 1 cut(s) 111
BssECI CCNNGG 5 cut(s) 328, 348, 361, 624, 1159
BssMI GATC 2 cut(s) 44, 912
BssNI GRCGYC 2 cut(s) 495, 884
BssT1I CCWWGG 3 cut(s) 348, 361, 624
Bst2UI CCWGG 1 cut(s) 1161
Bst4CI ACNGT 6 cut(s) 67, 108, 202, 320, 442, 1004
BstACI GRCGYC 2 cut(s) 495, 884
BstDEI CTNAG 3 cut(s) 8, 740, 796
BstDSI CCRYGG 2 cut(s) 328, 624
BstF5I GGATG 2 cut(s) 1097, 1189
BstH2I RGCGCY 1 cut(s) 498
BstHHI GCGC 1 cut(s) 497
BstKTI GATC 2 cut(s) 47, 915
BstMAI GTCTC 2 cut(s) 419, 891
BstMBI GATC 2 cut(s) 44, 912
BstNI CCWGG 1 cut(s) 1161
BstSCI CCNGG 2 cut(s) 129, 1159
BstSFI CTRYAG 2 cut(s) 538, 1224
BstSLI GKGCMC 1 cut(s) 308
BstV1I GCAGC 4 cut(s) 412, 420, 486, 742
BstV2I GAAGAC 3 cut(s) 998, 1005, 1044
BstX2I RGATCY 1 cut(s) 44
BstXI CCANNNNNNTGG 1 cut(s) 175
BstYI RGATCY 1 cut(s) 44
BsuRI GGCC 5 cut(s) 167, 254, 366, 747, 1158
BtgI CCRYGG 2 cut(s) 328, 624
BtgZI GCGATG 1 cut(s) 98
BtsCI GGATG 2 cut(s) 1097, 1189
BtsI GCAGTG 2 cut(s) 547, 750
BtsIMutI CAGTG 6 cut(s) 113, 462, 547, 748, 750, 990
BveI ACCTGC 1 cut(s) 1231
CaiI CAGNNNCTG 1 cut(s) 803
CfoI GCGC 1 cut(s) 497
Cfr10I RCCGGY 1 cut(s) 111
Cfr13I GGNCC 4 cut(s) 602, 808, 900, 1157
CseI GACGC 1 cut(s) 873
Csp6I GTAC 1 cut(s) 231
CviAII CATG 4 cut(s) 620, 625, 918, 1028
CviQI GTAC 1 cut(s) 231
DdeI CTNAG 3 cut(s) 8, 740, 796
DinI GGCGCC 1 cut(s) 496
DpnI GATC 2 cut(s) 46, 914
DpnII GATC 2 cut(s) 44, 912
DraI TTTAAA 1 cut(s) 771
DrdI GACNNNNNNGTC 3 cut(s) 609, 1046, 1076
DseDI GACNNNNNNGTC 3 cut(s) 609, 1046, 1076
EaeI YGGCCR 1 cut(s) 745
Eco130I CCWWGG 3 cut(s) 348, 361, 624
Eco47I GGWCC 3 cut(s) 602, 808, 900
Eco57I CTGAAG 2 cut(s) 1014, 1056
EcoO109I RGGNCCY 1 cut(s) 1157
EcoRI GAATTC 1 cut(s) 19
EcoRII CCWGG 1 cut(s) 1159
EcoT14I CCWWGG 3 cut(s) 348, 361, 624
EcoT22I ATGCAT 1 cut(s) 1029
EgeI GGCGCC 1 cut(s) 496
EheI GGCGCC 1 cut(s) 496
ErhI CCWWGG 3 cut(s) 348, 361, 624
Esp3I CGTCTC 1 cut(s) 891
FaeI CATG 4 cut(s) 623, 628, 921, 1031
FalI AAGNNNNNCTT 2 cut(s) 990, 1022
FaqI GGGAC 1 cut(s) 467
FatI CATG 4 cut(s) 619, 624, 917, 1027
Fnu4HI GCNGC 4 cut(s) 409, 426, 475, 756
FokI GGATG 2 cut(s) 1084, 1196
Fsp4HI GCNGC 4 cut(s) 409, 426, 475, 756
FspBI CTAG 1 cut(s) 596
GlaI GCGC 1 cut(s) 496
GluI GCNGC 4 cut(s) 409, 426, 475, 756
GsaI CCCAGC 1 cut(s) 657
GsuI CTGGAG 1 cut(s) 1182
HaeII RGCGCY 1 cut(s) 498
HaeIII GGCC 5 cut(s) 167, 254, 366, 747, 1158
HapII CCGG 2 cut(s) 112, 131
HgaI GACGC 1 cut(s) 873
HhaI GCGC 1 cut(s) 497
Hin1I GRCGYC 2 cut(s) 495, 884
Hin1II CATG 4 cut(s) 623, 628, 921, 1031
Hin6I GCGC 1 cut(s) 495
HinP1I GCGC 1 cut(s) 495
HinfI GANTC 8 cut(s) 27, 142, 191, 575, 715, 829, 856, 1238
HpaII CCGG 2 cut(s) 112, 131
HphI GGTGA 1 cut(s) 716
Hpy166II GTNNAC 3 cut(s) 808, 948, 1196
Hpy188I TCNGA 6 cut(s) 61, 190, 661, 703, 874, 912
Hpy188III TCNNGA 6 cut(s) 24, 100, 398, 833, 1020, 1242
Hpy8I GTNNAC 3 cut(s) 808, 948, 1196
HpyAV CCTTC 3 cut(s) 35, 157, 367
HpyCH4III ACNGT 6 cut(s) 67, 108, 202, 320, 442, 1004
HpyF3I CTNAG 3 cut(s) 8, 740, 796
Hsp92I GRCGYC 2 cut(s) 495, 884
Hsp92II CATG 4 cut(s) 623, 628, 921, 1031
HspAI GCGC 1 cut(s) 495
KasI GGCGCC 1 cut(s) 494
KpnI GGTACC 1 cut(s) 234
Kzo9I GATC 2 cut(s) 44, 912
LmnI GCTCC 1 cut(s) 363
Lsp1109I GCAGC 4 cut(s) 412, 420, 486, 742
LweI GCATC 5 cut(s) 83, 194, 694, 865, 1021
MaeI CTAG 1 cut(s) 596
MalI GATC 2 cut(s) 46, 914
MboI GATC 2 cut(s) 44, 912
MboII GAAGA 7 cut(s) 336, 986, 998, 1007, 1010, 1049, 1128
MflI RGATCY 1 cut(s) 44
MhlI GDGCHC 1 cut(s) 308
MlsI TGGCCA 1 cut(s) 747
MluCI AATT 4 cut(s) 19, 387, 587, 1072
MluNI TGGCCA 1 cut(s) 747
Mly113I GGCGCC 1 cut(s) 495
MlyI GAGTC 4 cut(s) 21, 136, 584, 850
MmeI TCCRAC 3 cut(s) 757, 878, 1197
MnlI CCTC 9 cut(s) 107, 151, 293, 655, 658, 738, 956, 1104, 1157
Mox20I TGGCCA 1 cut(s) 747
Mph1103I ATGCAT 1 cut(s) 1029
MscI TGGCCA 1 cut(s) 747
MseI TTAA 4 cut(s) 152, 204, 210, 770
MslI CAYNNNNRTG 1 cut(s) 873
Msp20I TGGCCA 1 cut(s) 747
MspI CCGG 2 cut(s) 112, 131
MspR9I CCNGG 2 cut(s) 131, 1161
Mva1269I GAATGC 1 cut(s) 1029
MvaI CCWGG 1 cut(s) 1161
NarI GGCGCC 1 cut(s) 495
NciI CCSGG 1 cut(s) 131
NcoI CCATGG 1 cut(s) 624
NdeII GATC 2 cut(s) 44, 912
NlaIII CATG 4 cut(s) 623, 628, 921, 1031
NlaIV GGNNCC 8 cut(s) 46, 116, 232, 305, 326, 439, 496, 1221
NsiI ATGCAT 1 cut(s) 1029
PctI GAATGC 1 cut(s) 1029
PfeI GAWTC 3 cut(s) 191, 715, 829
PflMI CCANNNNNTGG 1 cut(s) 625
PkrI GCNGC 4 cut(s) 410, 427, 476, 757
PleI GAGTC 4 cut(s) 21, 136, 583, 850
PluTI GGCGCC 1 cut(s) 498
PpsI GAGTC 4 cut(s) 21, 136, 583, 850
Psp6I CCWGG 1 cut(s) 1159
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 1 cut(s) 1159
PspN4I GGNNCC 8 cut(s) 46, 116, 232, 305, 326, 439, 496, 1221
PspPI GGNCC 4 cut(s) 602, 808, 900, 1157
PstI CTGCAG 2 cut(s) 542, 1228
PstNI CAGNNNCTG 1 cut(s) 803
PsuI RGATCY 1 cut(s) 44
RsaI GTAC 1 cut(s) 232
RsaNI GTAC 1 cut(s) 231
RseI CAYNNNNRTG 1 cut(s) 873
SaqAI TTAA 4 cut(s) 152, 204, 210, 770
SatI GCNGC 4 cut(s) 409, 426, 475, 756
Sau3AI GATC 2 cut(s) 44, 912
Sau96I GGNCC 4 cut(s) 602, 808, 900, 1157
SchI GAGTC 4 cut(s) 21, 136, 584, 850
ScrFI CCNGG 2 cut(s) 131, 1161
SduI GDGCHC 1 cut(s) 308
SetI ASST 7 cut(s) 360, 601, 607, 777, 802, 945, 1225
SfaNI GCATC 5 cut(s) 83, 194, 694, 865, 1021
SfcI CTRYAG 2 cut(s) 538, 1224
SfoI GGCGCC 1 cut(s) 496
SinI GGWCC 3 cut(s) 602, 808, 900
SmiMI CAYNNNNRTG 1 cut(s) 873
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 4 cut(s) 19, 387, 587, 1072
SspDI GGCGCC 1 cut(s) 494
SspI AATATT 1 cut(s) 571
SspMI CTAG 1 cut(s) 596
StyD4I CCNGG 2 cut(s) 129, 1159
StyI CCWWGG 3 cut(s) 348, 361, 624
TaaI ACNGT 6 cut(s) 67, 108, 202, 320, 442, 1004
TaqI TCGA 1 cut(s) 17
TasI AATT 4 cut(s) 19, 387, 587, 1072
TfiI GAWTC 3 cut(s) 191, 715, 829
Tru1I TTAA 4 cut(s) 152, 204, 210, 770
Tru9I TTAA 4 cut(s) 152, 204, 210, 770
TscAI CASTG 6 cut(s) 113, 469, 547, 748, 757, 997
TseI GCWGC 4 cut(s) 408, 425, 474, 755
TspDTI ATGAA 1 cut(s) 1200
TspGWI ACGGA 5 cut(s) 37, 317, 450, 708, 1192
TspRI CASTG 6 cut(s) 113, 469, 547, 748, 757, 997
Van91I CCANNNNNTGG 1 cut(s) 625
VpaK11BI GGWCC 3 cut(s) 602, 808, 900
XapI RAATTY 2 cut(s) 19, 587
XspI CTAG 1 cut(s) 596
Zsp2I ATGCAT 1 cut(s) 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.