Prupe.2G120800_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000488
Physical Location & Seq
Reverse (-)
17820337 .. 17823357
3021 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G120800.2

Sequence Viewer

Length: 1350 bp
ATGGCCACTAAGGTAGTGAGGAGGCACACCAATAGACCAGAAAGATCAGTGTATGCTCGACCTGCAGGAGGACCTTCAAAAACTGTTTGCGCCTTTTGGGCTGCTGGAAGGTGCACAAGGGAATTCTGTCGTTTCCTGCACTCGGATGCACCGCCTTCATCCATGAACCCTCAAATTTCAAAGAAGTCGTCTCTTGTTTGGACGAAGGAAGGAACTGCCACCGGAAAGGGCAATGCATGCAATGCTCCTCAGAAAAGCAATGCTCCTCAGAAAAGCAATGCTCCTCAGAAAATCAATGCTCCTCACGAAAGCAATGCTCCTCAGAAAAGCAATGCTGCCCAGAAAAGCAATCCTACTGTGAAAAATGTTTGCAAGTTCTGGGTAGATGGAAATTGTGTGAAAGGTGATCGATGCCTGTATTTGCATAACTGGTTCCGTGGTGAGGGGTTCTCCATGTTGGCAAAGCTCCAAGGGCACACGAAGGCTGTCACTGGTATTGCCCTTCCTGAACGAACTAACAAGCTTTATTCAACCAGTAAAGATGGAACAGCCAGAGTTTGGGACTGCCATACTGGTGAATGTGGCAGTGTGATTGATCTTGGTGGTGAAGCAGGCTCTTTAATTAGCGAAGGCCCATGGGTTTTTGCCGGTGTACCAAATCTTGTTAAGGTTTGGAATACTGAGACAAATTCTGAATTCAACCTGGATGGACCTGTTGGCCAAGTGCATGCTATGGTGGTTGGTAATGAAATGCTTTTCGCCGGGACACAGAATGGTGATATATGTGTGTGGAAAGGTAGCACTGAAACTAATCCGCCATTTTATCCTGCTGCAAGTCTGAAGGGCCACACTGGTGCTGTGGTATGTTTAACTGTTGGGCGCAACAGGCTTTACTCGGGTTCTGTGGACCATACAATTAAGGTGTGGGACCTTTATAATTTGCAGGGTGTTCTGACACTAAATGGGCATTCTGGTGCGGTGATGTCTCTTCTTTGCTGGGATCAGTTCTTGCTCTCATGCTCACTGGATGACACGATAAAGGTGTGGGCTGCCACTGAAGGAGGCGGTTTGGAAGTGACCTACACTCACAACGAAGAGCAGGGTGTTCTTGATCTTGCCGGAATGACAGATGCAGAAAGCAAGCCAATCTTGCTTTCTTCTTGCAATGATAATTCTGTCCGCATATATGAACTGCCATCATTCACTGAAAGAGGCAGATTATTTGCAAAACAAGAAGTTCGGACGGTCGAGGTAGGACCTGGAGGACTATTCTTCAGTGGGGATGCAACTGGTCTCTTTTCTGTTTGGAAGTGGATGGATGCTCCCGCCGTCAAAGTGGAGTCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04120 map03040 map04120
Pfam Domains
Protein Families
WD40 zf-CCCH

Protein Analysis

450

Amino Acids

48.57

Weight (kDa)

8.31

Isoelectric Point (pI)

31.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000488)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25440 AT4G25440 AT4G25440 AT5G51980 AT5G51980
fragaria_vesca FvH4_2g11580 FvH4_3g29280 FvH4_4g05980 FvH4_7g28880 FvH4_7g28880
malus_domestica MD01G1195600.v1.1 MD02G1195200.v1.1 MD07G1262400.v1.1
prunus_persica Prupe.2G102200_v2.0.a1 Prupe.2G102200_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G120800_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153300_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G153400_v2.0.a1 Prupe.2G288900_v2.0.a1
pyrus_communis pycom01g20620 pycom02g15900 pycom07g24140
rosa_chinensis RchiOBHm_Chr1g0376561 RchiOBHm_Chr3g0483051 RchiOBHm_Chr3g0483061 RchiOBHm_Chr3g0483601 RchiOBHm_Chr3g0483611 RchiOBHm_Chr4g0402321 RchiOBHm_Chr6g0270771
rosa_laevigata RLG00000009464 RLG00000009486 RLG00000013770 RLG00000023264 RLG00000023325 RLG00000026601 RLG00000035049
rosa_multiflora Rmu_co8110388.1_g000001 Rmu_co8419409.1_g000001 Rmu_sc0000555.1_g000012 Rmu_sc0000642.1_g000020 Rmu_sc0001308.1_g000010 Rmu_sc0002963.1_g000021 Rmu_sc0004788.1_g000012 Rmu_sc0005594.1_g000015 Rmu_sc0022770.1_g000001
rosa_roxburghii Rroxscaffold_4G00282000 Rroxscaffold_5G00341940 Rroxscaffold_5G00341950 Rroxscaffold_6G00398950 Rroxscaffold_7G00197610
rosa_rugosa Rorug01G0396500 Rorug03G0207400 Rorug03G0346000 Rorug04G0166800 Rorug06G0056400 Rorug06G0056500
rosa_samantha Rh1AG412700 Rh1BG372400 Rh1BG372600 Rh1CG386200 Rh1CG386500 Rh1DG403300 Rh1DG403500 Rh3AG255500 Rh3AG255600 Rh3BG292600 Rh3CG290200 Rh3DG278800 Rh3DG286100 Rh4AG075500 Rh4AG111600 Rh4BG071900 Rh4BG072100 Rh4BG231300 Rh4CG080200 Rh4CG080300 Rh4DG069300 Rh4DG069500 Rh6AG175700 Rh6BG178900 Rh6CG175200 Rh6DG167500
rosa_wichuraiana Rw1G036190 Rw3G023110 Rw4G006070 Rw6G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 936
Acc36I ACCTGC 1 cut(s) 70
AccB7I CCANNNNNTGG 1 cut(s) 558
AciI CCGC 6 cut(s) 152, 815, 977, 1065, 1180, 1326
AclWI GGATC 1 cut(s) 1008
AcoI YGGCCR 2 cut(s) 3, 718
AcsI RAATTY 4 cut(s) 122, 174, 688, 695
AcuI CTGAAG 3 cut(s) 860, 1077, 1258
AfaI GTAC 1 cut(s) 654
AfiI CCNNNNNNNGG 4 cut(s) 68, 142, 442, 558
AgsI TTSAA 4 cut(s) 78, 180, 531, 700
AjnI CCWGG 2 cut(s) 702, 1258
AjuI GAANNNNNNNTTGG 2 cut(s) 1138, 1170
AleI CACNNNNGTG 1 cut(s) 852
AluBI AGCT 2 cut(s) 466, 523
AluI AGCT 2 cut(s) 466, 523
Alw21I GWGCWC 1 cut(s) 116
Alw26I GTCTC 4 cut(s) 195, 677, 990, 1298
Alw44I GTGCAC 1 cut(s) 112
AlwI GGATC 1 cut(s) 1008
Ama87I CYCGRG 1 cut(s) 895
AoxI GGCC 4 cut(s) 3, 631, 718, 844
ApaLI GTGCAC 1 cut(s) 112
ApeKI GCWGC 4 cut(s) 101, 335, 830, 1049
ApoI RAATTY 4 cut(s) 122, 174, 688, 695
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
AspLEI GCGC 2 cut(s) 92, 882
AspS9I GGNCC 7 cut(s) 71, 632, 710, 844, 907, 928, 1256
AsuC2I CCSGG 1 cut(s) 763
AsuHPI GGTGA 6 cut(s) 416, 452, 587, 617, 788, 991
AvaI CYCGRG 1 cut(s) 895
AvaII GGWCC 5 cut(s) 71, 710, 907, 928, 1256
BaeGI GKGCMC 2 cut(s) 116, 477
BalI TGGCCA 2 cut(s) 5, 720
BbsI GAAGAC 1 cut(s) 1335
Bbv12I GWGCWC 1 cut(s) 116
BbvI GCAGC 4 cut(s) 88, 322, 817, 1036
BccI CCATC 5 cut(s) 380, 536, 701, 1204, 1309
BceAI ACGGC 1 cut(s) 1313
BcgI CGANNNNNNTGC 2 cut(s) 296, 330
BciT130I CCWGG 2 cut(s) 704, 1260
BcnI CCSGG 1 cut(s) 763
BcoDI GTCTC 4 cut(s) 195, 677, 990, 1298
BfmI CTRYAG 1 cut(s) 63
BfuAI ACCTGC 1 cut(s) 70
BglI GCCNNNNNGGC 1 cut(s) 98
BisI GCNGC 4 cut(s) 102, 336, 831, 1050
BlsI GCNGC 4 cut(s) 103, 337, 832, 1051
Bme1390I CCNGG 3 cut(s) 704, 763, 1260
Bme18I GGWCC 5 cut(s) 71, 710, 907, 928, 1256
BmeT110I CYCGRG 1 cut(s) 895
BmgT120I GGNCC 7 cut(s) 71, 632, 710, 844, 907, 928, 1256
BmiI GGNNCC 2 cut(s) 434, 929
BmrFI CCNGG 3 cut(s) 704, 763, 1260
BmsI GCATC 5 cut(s) 136, 401, 1120, 1273, 1309
BpiI GAAGAC 1 cut(s) 1335
BplI GAGNNNNNCTC 2 cut(s) 434, 466
BpmI CTGGAG 1 cut(s) 1281
BpuMI CCSGG 1 cut(s) 763
Bsa29I ATCGAT 1 cut(s) 409
BsaI GGTCTC 1 cut(s) 1298
BsaJI CCNNGG 3 cut(s) 436, 469, 635
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 142, 442, 558
Bse118I RCCGGY 1 cut(s) 647
Bse1I ACTGG 7 cut(s) 434, 496, 534, 577, 856, 1029, 1294
Bse3DI GCAATG 7 cut(s) 238, 247, 265, 283, 319, 337, 1171
BseBI CCWGG 2 cut(s) 704, 1260
BseCI ATCGAT 1 cut(s) 409
BseDI CCNNGG 3 cut(s) 436, 469, 635
BseGI GGATG 7 cut(s) 151, 158, 712, 1033, 1288, 1320, 1324
BseLI CCNNNNNNNGG 4 cut(s) 68, 142, 442, 558
BseMI GCAATG 7 cut(s) 238, 247, 265, 283, 319, 337, 1171
BseMII CTCAG 5 cut(s) 263, 281, 299, 335, 672
BseNI ACTGG 7 cut(s) 434, 496, 534, 577, 856, 1029, 1294
BseRI GAGGAG 6 cut(s) 34, 237, 255, 273, 291, 309
BseSI GKGCMC 2 cut(s) 116, 477
BseXI GCAGC 4 cut(s) 88, 322, 817, 1036
BseYI CCCAGC 1 cut(s) 996
BsgI GTGCAG 1 cut(s) 122
Bsh1285I CGRYCG 1 cut(s) 1248
BshFI GGCC 4 cut(s) 5, 633, 720, 846
BshVI ATCGAT 1 cut(s) 409
BsiEI CGRYCG 1 cut(s) 1248
BsiHKAI GWGCWC 1 cut(s) 116
BsiHKCI CYCGRG 1 cut(s) 895
BsiSI CCGG 4 cut(s) 222, 648, 762, 1119
BslFI GGGAC 3 cut(s) 575, 778, 941
BslI CCNNNNNNNGG 4 cut(s) 68, 142, 442, 558
BsmAI GTCTC 4 cut(s) 195, 677, 990, 1298
BsmBI CGTCTC 1 cut(s) 195
BsmFI GGGAC 3 cut(s) 575, 778, 941
BsmI GAATGC 1 cut(s) 967
BsnI GGCC 4 cut(s) 5, 633, 720, 846
Bso31I GGTCTC 1 cut(s) 1298
BsoBI CYCGRG 1 cut(s) 895
Bsp1286I GDGCHC 2 cut(s) 116, 477
Bsp143I GATC 5 cut(s) 44, 406, 595, 1000, 1111
Bsp19I CCATGG 1 cut(s) 635
BspACI CCGC 6 cut(s) 152, 815, 977, 1065, 1180, 1326
BspANI GGCC 4 cut(s) 5, 633, 720, 846
BspCNI CTCAG 5 cut(s) 262, 280, 298, 334, 673
BspDI ATCGAT 1 cut(s) 409
BspHI TCATGA 1 cut(s) 1346
BspLI GGNNCC 2 cut(s) 434, 929
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 1 cut(s) 1008
BspQI GCTCTTC 1 cut(s) 1089
BspTNI GGTCTC 1 cut(s) 1298
BsrDI GCAATG 7 cut(s) 238, 247, 265, 283, 319, 337, 1171
BsrFI RCCGGY 1 cut(s) 647
BsrI ACTGG 7 cut(s) 434, 496, 534, 577, 856, 1029, 1294
BssAI RCCGGY 1 cut(s) 647
BssECI CCNNGG 3 cut(s) 436, 469, 635
BssMI GATC 5 cut(s) 44, 406, 595, 1000, 1111
BssT1I CCWWGG 2 cut(s) 469, 635
Bst2UI CCWGG 2 cut(s) 704, 1260
Bst4CI ACNGT 4 cut(s) 85, 358, 874, 1246
Bst6I CTCTTC 2 cut(s) 993, 1089
BstAPI GCANNNNNTGC 2 cut(s) 237, 242
BstC8I GCNNGC 4 cut(s) 238, 613, 729, 1142
BstDEI CTNAG 6 cut(s) 9, 249, 267, 285, 321, 681
BstDSI CCRYGG 2 cut(s) 436, 635
BstENI CCTNNNNNAGG 1 cut(s) 66
BstF5I GGATG 7 cut(s) 151, 158, 712, 1033, 1288, 1320, 1324
BstHHI GCGC 2 cut(s) 92, 882
BstKTI GATC 5 cut(s) 47, 409, 598, 1003, 1114
BstMAI GTCTC 4 cut(s) 195, 677, 990, 1298
BstMBI GATC 5 cut(s) 44, 406, 595, 1000, 1111
BstMCI CGRYCG 1 cut(s) 1248
BstMWI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 472, 886, 1150
BstNI CCWGG 2 cut(s) 704, 1260
BstNSI RCATGY 2 cut(s) 240, 731
BstSCI CCNGG 3 cut(s) 702, 761, 1258
BstSFI CTRYAG 1 cut(s) 63
BstSLI GKGCMC 2 cut(s) 116, 477
BstV1I GCAGC 4 cut(s) 88, 322, 817, 1036
BstV2I GAAGAC 1 cut(s) 1335
Bsu15I ATCGAT 1 cut(s) 409
BsuRI GGCC 4 cut(s) 5, 633, 720, 846
BsuTUI ATCGAT 1 cut(s) 409
BtgI CCRYGG 2 cut(s) 436, 635
BtsCI GGATG 7 cut(s) 151, 158, 712, 1033, 1288, 1320, 1324
BtsI GCAGTG 1 cut(s) 592
BtsIMutI CAGTG 9 cut(s) 54, 489, 592, 801, 849, 1022, 1053, 1203, 1282
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 4 cut(s) 238, 613, 729, 1142
CciI TCATGA 1 cut(s) 1346
CfoI GCGC 2 cut(s) 92, 882
Cfr10I RCCGGY 1 cut(s) 647
Cfr13I GGNCC 7 cut(s) 71, 632, 710, 844, 907, 928, 1256
ClaI ATCGAT 1 cut(s) 409
Csp6I GTAC 1 cut(s) 653
CviAII CATG 7 cut(s) 163, 237, 454, 636, 728, 1017, 1347
CviQI GTAC 1 cut(s) 653
DdeI CTNAG 6 cut(s) 9, 249, 267, 285, 321, 681
DpnI GATC 5 cut(s) 46, 408, 597, 1002, 1113
DpnII GATC 5 cut(s) 44, 406, 595, 1000, 1111
EaeI YGGCCR 2 cut(s) 3, 718
Eam1104I CTCTTC 2 cut(s) 993, 1089
EarI CTCTTC 2 cut(s) 993, 1089
EciI GGCGGA 1 cut(s) 804
Eco130I CCWWGG 2 cut(s) 469, 635
Eco31I GGTCTC 1 cut(s) 1298
Eco47I GGWCC 5 cut(s) 71, 710, 907, 928, 1256
Eco57I CTGAAG 3 cut(s) 860, 1077, 1258
Eco88I CYCGRG 1 cut(s) 895
EcoNI CCTNNNNNAGG 1 cut(s) 66
EcoO109I RGGNCCY 3 cut(s) 71, 928, 1256
EcoRI GAATTC 2 cut(s) 122, 695
EcoRII CCWGG 2 cut(s) 702, 1258
EcoT14I CCWWGG 2 cut(s) 469, 635
EcoT22I ATGCAT 1 cut(s) 238
ErhI CCWWGG 2 cut(s) 469, 635
Esp3I CGTCTC 1 cut(s) 195
FaeI CATG 7 cut(s) 166, 240, 457, 639, 731, 1020, 1350
FalI AAGNNNNNCTT 2 cut(s) 1133, 1165
FaqI GGGAC 3 cut(s) 575, 778, 941
FatI CATG 7 cut(s) 162, 236, 453, 635, 727, 1016, 1346
FauI CCCGC 1 cut(s) 1333
Fnu4HI GCNGC 4 cut(s) 102, 336, 831, 1050
FokI GGATG 7 cut(s) 145, 158, 719, 1040, 1295, 1327, 1331
Fsp4HI GCNGC 4 cut(s) 102, 336, 831, 1050
GlaI GCGC 2 cut(s) 91, 881
GluI GCNGC 4 cut(s) 102, 336, 831, 1050
GsaI CCCAGC 1 cut(s) 1000
GsuI CTGGAG 1 cut(s) 1281
HaeIII GGCC 4 cut(s) 5, 633, 720, 846
HapII CCGG 4 cut(s) 222, 648, 762, 1119
HhaI GCGC 2 cut(s) 92, 882
Hin1II CATG 7 cut(s) 166, 240, 457, 639, 731, 1020, 1350
Hin6I GCGC 2 cut(s) 90, 880
HinP1I GCGC 2 cut(s) 90, 880
HindIII AAGCTT 1 cut(s) 521
HinfI GANTC 1 cut(s) 1340
HpaII CCGG 4 cut(s) 222, 648, 762, 1119
HphI GGTGA 6 cut(s) 416, 452, 587, 617, 788, 991
Hpy166II GTNNAC 3 cut(s) 114, 653, 907
Hpy188I TCNGA 9 cut(s) 145, 252, 270, 288, 324, 694, 840, 954, 1242
Hpy188III TCNNGA 4 cut(s) 305, 506, 1109, 1347
Hpy8I GTNNAC 3 cut(s) 114, 653, 907
HpyCH4III ACNGT 4 cut(s) 85, 358, 874, 1246
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 472, 886, 1150
HpyF3I CTNAG 6 cut(s) 9, 249, 267, 285, 321, 681
Hsp92II CATG 7 cut(s) 166, 240, 457, 639, 731, 1020, 1350
HspAI GCGC 2 cut(s) 90, 880
Kzo9I GATC 5 cut(s) 44, 406, 595, 1000, 1111
LguI GCTCTTC 1 cut(s) 1089
LmnI GCTCC 7 cut(s) 250, 268, 286, 304, 322, 471, 1327
Lsp1109I GCAGC 4 cut(s) 88, 322, 817, 1036
LweI GCATC 5 cut(s) 136, 401, 1120, 1273, 1309
MaeIII GTNAC 2 cut(s) 487, 1075
MalI GATC 5 cut(s) 46, 408, 597, 1002, 1113
MboI GATC 5 cut(s) 44, 406, 595, 1000, 1111
MboII GAAGA 5 cut(s) 980, 1106, 1149, 1264, 1335
MhlI GDGCHC 2 cut(s) 116, 477
MlsI TGGCCA 2 cut(s) 5, 720
MluCI AATT 9 cut(s) 122, 174, 391, 621, 688, 695, 915, 937, 1171
MluNI TGGCCA 2 cut(s) 5, 720
MlyI GAGTC 1 cut(s) 1349
Mox20I TGGCCA 2 cut(s) 5, 720
Mph1103I ATGCAT 1 cut(s) 238
MscI TGGCCA 2 cut(s) 5, 720
MseI TTAA 4 cut(s) 620, 666, 869, 918
MslI CAYNNNNRTG 4 cut(s) 144, 573, 852, 972
Msp20I TGGCCA 2 cut(s) 5, 720
MspI CCGG 4 cut(s) 222, 648, 762, 1119
MspR9I CCNGG 3 cut(s) 704, 763, 1260
Mva1269I GAATGC 1 cut(s) 967
MvaI CCWGG 2 cut(s) 704, 1260
MwoI GCNNNNNNNGC 7 cut(s) 62, 98, 237, 242, 472, 886, 1150
NciI CCSGG 1 cut(s) 763
NcoI CCATGG 1 cut(s) 635
NdeII GATC 5 cut(s) 44, 406, 595, 1000, 1111
NlaIII CATG 7 cut(s) 166, 240, 457, 639, 731, 1020, 1350
NlaIV GGNNCC 2 cut(s) 434, 929
NmuCI GTSAC 2 cut(s) 487, 1075
NsiI ATGCAT 1 cut(s) 238
NspI RCATGY 2 cut(s) 240, 731
OliI CACNNNNGTG 1 cut(s) 852
PaeI GCATGC 2 cut(s) 240, 731
PagI TCATGA 1 cut(s) 1346
PciSI GCTCTTC 1 cut(s) 1089
PctI GAATGC 1 cut(s) 967
PflMI CCANNNNNTGG 1 cut(s) 558
PkrI GCNGC 4 cut(s) 103, 337, 832, 1051
PleI GAGTC 1 cut(s) 1348
PpsI GAGTC 1 cut(s) 1348
PpuMI RGGWCCY 3 cut(s) 71, 928, 1256
PsiI TTATAA 1 cut(s) 936
Psp5II RGGWCCY 3 cut(s) 71, 928, 1256
Psp6I CCWGG 2 cut(s) 702, 1258
PspFI CCCAGC 1 cut(s) 996
PspGI CCWGG 2 cut(s) 702, 1258
PspN4I GGNNCC 2 cut(s) 434, 929
PspPI GGNCC 7 cut(s) 71, 632, 710, 844, 907, 928, 1256
PspPPI RGGWCCY 3 cut(s) 71, 928, 1256
PstI CTGCAG 1 cut(s) 67
RsaI GTAC 1 cut(s) 654
RsaNI GTAC 1 cut(s) 653
RseI CAYNNNNRTG 4 cut(s) 144, 573, 852, 972
SapI GCTCTTC 1 cut(s) 1089
SaqAI TTAA 4 cut(s) 620, 666, 869, 918
SatI GCNGC 4 cut(s) 102, 336, 831, 1050
Sau3AI GATC 5 cut(s) 44, 406, 595, 1000, 1111
Sau96I GGNCC 7 cut(s) 71, 632, 710, 844, 907, 928, 1256
SbfI CCTGCAGG 1 cut(s) 67
SchI GAGTC 1 cut(s) 1349
ScrFI CCNGG 3 cut(s) 704, 763, 1260
SdaI CCTGCAGG 1 cut(s) 67
SduI GDGCHC 2 cut(s) 116, 477
SfaNI GCATC 5 cut(s) 136, 401, 1120, 1273, 1309
SfcI CTRYAG 1 cut(s) 63
SinI GGWCC 5 cut(s) 71, 710, 907, 928, 1256
SmiMI CAYNNNNRTG 4 cut(s) 144, 573, 852, 972
SphI GCATGC 2 cut(s) 240, 731
Sse8387I CCTGCAGG 1 cut(s) 67
Sse9I AATT 9 cut(s) 122, 174, 391, 621, 688, 695, 915, 937, 1171
SsiI CCGC 6 cut(s) 152, 815, 977, 1065, 1180, 1326
StyD4I CCNGG 3 cut(s) 702, 761, 1258
StyI CCWWGG 2 cut(s) 469, 635
TaaI ACNGT 4 cut(s) 85, 358, 874, 1246
TaqI TCGA 3 cut(s) 58, 409, 1248
TasI AATT 9 cut(s) 122, 174, 391, 621, 688, 695, 915, 937, 1171
Tru1I TTAA 4 cut(s) 620, 666, 869, 918
Tru9I TTAA 4 cut(s) 620, 666, 869, 918
TscAI CASTG 9 cut(s) 54, 496, 592, 808, 856, 1029, 1060, 1210, 1282
TseFI GTSAC 2 cut(s) 487, 1075
TseI GCWGC 4 cut(s) 101, 335, 830, 1049
Tsp45I GTSAC 2 cut(s) 487, 1075
TspDTI ATGAA 5 cut(s) 147, 179, 762, 1203, 1335
TspGWI ACGGA 1 cut(s) 425
TspRI CASTG 9 cut(s) 54, 496, 592, 808, 856, 1029, 1060, 1210, 1282
Van91I CCANNNNNTGG 1 cut(s) 558
VneI GTGCAC 1 cut(s) 112
VpaK11BI GGWCC 5 cut(s) 71, 710, 907, 928, 1256
XagI CCTNNNNNAGG 1 cut(s) 66
XapI RAATTY 4 cut(s) 122, 174, 688, 695
XceI RCATGY 2 cut(s) 240, 731
Zsp2I ATGCAT 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.