Prupe.6G156200_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
13739742 .. 13750985
11244 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G156200.1

Sequence Viewer

Length: 1527 bp
ATGTTGAGAGTTTCACTTCTGCTGTGTTTTCTTCTTACTATAAAAAGCGTTTCTTCAAGCACTGATAACTTTTGCAGAGATGACTTCCCACTGGCGCCGGCCTTTGTGTTTGGTGCTTCCTCCTCTGCTTATCAGGTGGAAGGTGCTGCAGGCGAAGATGGCAGGACCCCGAGCATCTTGGACACATATGCGCAAGCTGGTCATTTTCATGGAGCCACTGGAGATGTAGCGTGTGACGCGTATCACAAGTATAAGGAAGATGTTCAACTAATGGCAGATACTGGATTAGAGGCATATAGATTTTCCATCTCATGGTCAAGACTTATCCCAAATGGAAAAGGACCTGTCAATCCAAAGGGTCTACAATATTACAACAATCTTATTGATCAACTAATCAGCCATGCAGGAATCCAACCACATGTTACTTTACACCATAGTGATCTCCCACAGGCACTTGATGATGAGTATGGAGGATGGGTTAGCCGAAAGATTGTAAAAGACTTCACTGCGTATGCAGATGTGTGCTTCAAAAATTTCGGGGATAGAGTTTTGCATTGGACTACTATGAATGAACCTAATGTTTTTGTACTTGGGGGTTATGATTCTGGATTTTCTCCACCACAACGATGTTCAATTCCATTTGGTCTCAACTGCTCTAGGGGTAACTCCTCAACAGAACCATACTTGGCAACGCATAATATCTTGTTATCTCATGCGTCGGCTGCTAGATTGTACAAGAAAAACTACCAGGATAAACAACGTGGGTTTATAGGAATCAACCTTTTTGCCTTTTGGTTTTTTCCTCAAACAAAAACCATTGAAGATGAACTAGCAACCCAAAGAGGCCTCGACTTCTATTTTGGTTGGTATTTGAATCCCTTGGTGTTTGGAGATTACCCTGATGTAGTGAAAACAAATGCAGGCTCTAGAATTCCTTTCTTCACTAGGCTTGAGTCTCAAAGTGTCAAGGGTTCGTTTGACTTCATAGGATTTAATTATTATACCGTCTCATACGCCGAGGACAACTCCATCAGCTTAAAGAGTACAAACAGAGACTATATTGCTGACTCAGCAATGAAGACGAGACTTCTGAAATGTAATGAATCATCATTCGAGTATCCAATAGCTCCCTGGGGCCTGCAAAGACTGTTGGAATATATGAAGCAAAATTATGGCAATCCCCCTATATATATCCATGAAAATGGTCAACAAACTGCACGCAATTCATCATTGGAGGATAGGTCGAGGGTAAAATATTTGCGTGGACATATCCAAAGTTTGCTTGCAGCTGTAAGGAATGGATCAAATGCCAGAGGCTATTTTATATGGTCCTTCATGGACTCCCTTGAGCTATTGAACGGCTATGAATCAAGCTTTGGCCTATACTACATCGATTTGGACGACCCTGATTTAAAAAGACAACCCAAACTCTCTGCTCATTGGTACTCCCATTTTCTAAAGAGCAAGAACCTCACCAGCTTAGATGGATTTCTTGAATCCCTTTCGCATGGTTACCATTCTCAGTAA

Protein Analysis

509

Amino Acids

57.46

Weight (kDa)

6.35

Isoelectric Point (pI)

34.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 192
AccB1I GGYRCC 1 cut(s) 94
AccB7I CCANNNNNTGG 1 cut(s) 312
AccI GTMKAC 1 cut(s) 361
AccII CGCG 1 cut(s) 239
AclWI GGATC 1 cut(s) 1309
AcsI RAATTY 2 cut(s) 532, 930
AcyI GRCGYC 1 cut(s) 95
AfaI GTAC 4 cut(s) 588, 734, 1045, 1445
AfiI CCNNNNNNNGG 1 cut(s) 312
AflIII ACRYGT 2 cut(s) 237, 418
AgsI TTSAA 8 cut(s) 57, 266, 529, 633, 821, 874, 1357, 1496
AjnI CCWGG 2 cut(s) 747, 1130
AjuI GAANNNNNNNTTGG 2 cut(s) 1359, 1391
AleI CACNNNNGTG 1 cut(s) 435
AluBI AGCT 7 cut(s) 197, 1035, 1127, 1289, 1351, 1374, 1479
AluI AGCT 7 cut(s) 197, 1035, 1127, 1289, 1351, 1374, 1479
Alw26I GTCTC 5 cut(s) 650, 960, 1012, 1047, 1078
AlwI GGATC 1 cut(s) 1309
AlwNI CAGNNNCTG 1 cut(s) 281
Ama87I CYCGRG 1 cut(s) 169
AoxI GGCC 4 cut(s) 99, 844, 1135, 1378
ApeKI GCWGC 3 cut(s) 146, 722, 1286
ApoI RAATTY 2 cut(s) 532, 930
ArsI GACNNNNNNTTYG 2 cut(s) 842, 874
Asp700I GAANNNNTTC 1 cut(s) 261
AspLEI GCGC 2 cut(s) 97, 193
AspS9I GGNCC 4 cut(s) 165, 341, 1135, 1329
AsuHPI GGTGA 1 cut(s) 1465
AvaI CYCGRG 1 cut(s) 169
AvaII GGWCC 3 cut(s) 165, 341, 1329
BanI GGYRCC 1 cut(s) 94
BbsI GAAGAC 1 cut(s) 1085
BbvI GCAGC 3 cut(s) 133, 709, 1298
BccI CCATC 5 cut(s) 152, 314, 468, 1037, 1478
BceAI ACGGC 1 cut(s) 1375
BciT130I CCWGG 2 cut(s) 749, 1132
BciVI GTATCC 1 cut(s) 1128
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 5 cut(s) 650, 960, 1012, 1047, 1078
BfaI CTAG 5 cut(s) 657, 726, 830, 927, 945
BfmI CTRYAG 1 cut(s) 147
BfoI RGCGCY 1 cut(s) 98
BfuI GTATCC 1 cut(s) 1128
BisI GCNGC 3 cut(s) 147, 723, 1287
BlsI GCNGC 3 cut(s) 148, 724, 1288
Bme1390I CCNGG 2 cut(s) 749, 1132
Bme18I GGWCC 3 cut(s) 165, 341, 1329
BmeT110I CYCGRG 1 cut(s) 169
BmgT120I GGNCC 4 cut(s) 165, 341, 1135, 1329
BmiI GGNNCC 4 cut(s) 96, 167, 214, 1136
BmrFI CCNGG 2 cut(s) 749, 1132
BmsI GCATC 1 cut(s) 183
BpiI GAAGAC 1 cut(s) 1085
BplI GAGNNNNNCTC 2 cut(s) 1010, 1042
BpmI CTGGAG 1 cut(s) 240
BpuEI CTTGAG 2 cut(s) 971, 1367
Bsa29I ATCGAT 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 95
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 4 cut(s) 879, 1017, 1130, 1131
BsaXI ACNNNNNCTCC 4 cut(s) 462, 492, 1226, 1256
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 3 cut(s) 96, 223, 286
Bse3DI GCAATG 1 cut(s) 1080
BseBI CCWGG 2 cut(s) 749, 1132
BseCI ATCGAT 1 cut(s) 1392
BseDI CCNNGG 4 cut(s) 879, 1017, 1130, 1131
BseGI GGATG 1 cut(s) 479
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMI GCAATG 1 cut(s) 1080
BseMII CTCAG 1 cut(s) 1083
BseNI ACTGG 3 cut(s) 96, 223, 286
BseRI GAGGAG 2 cut(s) 112, 658
BseXI GCAGC 3 cut(s) 133, 709, 1298
BsgI GTGCAG 1 cut(s) 1200
Bsh1236I CGCG 1 cut(s) 239
BshFI GGCC 4 cut(s) 101, 846, 1137, 1380
BshNI GGYRCC 1 cut(s) 94
BshVI ATCGAT 1 cut(s) 1392
BsiHKCI CYCGRG 1 cut(s) 169
BsiSI CCGG 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 312
BsmAI GTCTC 5 cut(s) 650, 960, 1012, 1047, 1078
BsmBI CGTCTC 1 cut(s) 1012
BsnI GGCC 4 cut(s) 101, 846, 1137, 1380
Bso31I GGTCTC 1 cut(s) 650
BsoBI CYCGRG 1 cut(s) 169
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 3 cut(s) 385, 439, 1301
BspANI GGCC 4 cut(s) 101, 846, 1137, 1380
BspCNI CTCAG 1 cut(s) 1082
BspDI ATCGAT 1 cut(s) 1392
BspFNI CGCG 1 cut(s) 239
BspLI GGNNCC 4 cut(s) 96, 167, 214, 1136
BspMAI CTGCAG 1 cut(s) 151
BspPI GGATC 1 cut(s) 1309
BspT107I GGYRCC 1 cut(s) 94
BspTNI GGTCTC 1 cut(s) 650
BsrDI GCAATG 1 cut(s) 1080
BsrFI RCCGGY 1 cut(s) 97
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 3 cut(s) 96, 223, 286
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 4 cut(s) 879, 1017, 1130, 1131
BssMI GATC 3 cut(s) 385, 439, 1301
BssNI GRCGYC 1 cut(s) 95
BssT1I CCWWGG 1 cut(s) 879
Bst2UI CCWGG 2 cut(s) 749, 1132
Bst4CI ACNGT 2 cut(s) 1006, 1149
BstACI GRCGYC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 732
BstC8I GCNNGC 7 cut(s) 99, 151, 195, 922, 1139, 1219, 1284
BstDEI CTNAG 3 cut(s) 1069, 1480, 1521
BstEII GGTNACC 1 cut(s) 1511
BstF5I GGATG 1 cut(s) 479
BstFNI CGCG 1 cut(s) 239
BstH2I RGCGCY 1 cut(s) 98
BstHHI GCGC 2 cut(s) 97, 193
BstKTI GATC 3 cut(s) 388, 442, 1304
BstMAI GTCTC 5 cut(s) 650, 960, 1012, 1047, 1078
BstMBI GATC 3 cut(s) 385, 439, 1301
BstMWI GCNNNNNNNGC 4 cut(s) 159, 236, 722, 1070
BstNI CCWGG 2 cut(s) 749, 1132
BstNSI RCATGY 1 cut(s) 422
BstPI GGTNACC 1 cut(s) 1511
BstSCI CCNGG 2 cut(s) 747, 1130
BstSFI CTRYAG 1 cut(s) 147
BstUI CGCG 1 cut(s) 239
BstV1I GCAGC 3 cut(s) 133, 709, 1298
BstV2I GAAGAC 1 cut(s) 1085
BstXI CCANNNNNNTGG 1 cut(s) 1202
Bsu15I ATCGAT 1 cut(s) 1392
BsuI GTATCC 1 cut(s) 1128
BsuRI GGCC 4 cut(s) 101, 846, 1137, 1380
BsuTUI ATCGAT 1 cut(s) 1392
BtsCI GGATG 1 cut(s) 479
BtsI GCAGTG 1 cut(s) 504
BtsIMutI CAGTG 4 cut(s) 60, 89, 216, 504
Cac8I GCNNGC 7 cut(s) 99, 151, 195, 922, 1139, 1219, 1284
CaiI CAGNNNCTG 1 cut(s) 281
CfoI GCGC 2 cut(s) 97, 193
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 4 cut(s) 165, 341, 1135, 1329
ClaI ATCGAT 1 cut(s) 1392
CseI GACGC 2 cut(s) 245, 705
Csp6I GTAC 4 cut(s) 587, 733, 1044, 1444
CviAII CATG 8 cut(s) 209, 312, 401, 419, 713, 1196, 1336, 1508
CviQI GTAC 4 cut(s) 587, 733, 1044, 1444
DdeI CTNAG 3 cut(s) 1069, 1480, 1521
DinI GGCGCC 1 cut(s) 96
DpnI GATC 3 cut(s) 387, 441, 1303
DpnII GATC 3 cut(s) 385, 439, 1301
DraI TTTAAA 1 cut(s) 1413
Eco130I CCWWGG 1 cut(s) 879
Eco147I AGGCCT 1 cut(s) 846
Eco31I GGTCTC 1 cut(s) 650
Eco47I GGWCC 3 cut(s) 165, 341, 1329
Eco88I CYCGRG 1 cut(s) 169
Eco91I GGTNACC 1 cut(s) 1511
EcoO109I RGGNCCY 3 cut(s) 165, 341, 1135
EcoO65I GGTNACC 1 cut(s) 1511
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 2 cut(s) 747, 1130
EcoT14I CCWWGG 1 cut(s) 879
EgeI GGCGCC 1 cut(s) 96
EheI GGCGCC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 879
Esp3I CGTCTC 1 cut(s) 1012
FaeI CATG 8 cut(s) 212, 315, 404, 422, 716, 1199, 1339, 1511
FalI AAGNNNNNCTT 2 cut(s) 37, 69
FatI CATG 8 cut(s) 208, 311, 400, 418, 712, 1195, 1335, 1507
FauNDI CATATG 1 cut(s) 187
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 361
Fnu4HI GCNGC 3 cut(s) 147, 723, 1287
FokI GGATG 1 cut(s) 486
Fsp4HI GCNGC 3 cut(s) 147, 723, 1287
FspBI CTAG 5 cut(s) 657, 726, 830, 927, 945
FspI TGCGCA 1 cut(s) 192
GlaI GCGC 2 cut(s) 96, 192
GluI GCNGC 3 cut(s) 147, 723, 1287
GsuI CTGGAG 1 cut(s) 240
HaeII RGCGCY 1 cut(s) 98
HaeIII GGCC 4 cut(s) 101, 846, 1137, 1380
HapII CCGG 1 cut(s) 98
HgaI GACGC 2 cut(s) 245, 705
HhaI GCGC 2 cut(s) 97, 193
Hin1I GRCGYC 1 cut(s) 95
Hin1II CATG 8 cut(s) 212, 315, 404, 422, 716, 1199, 1339, 1511
Hin6I GCGC 2 cut(s) 95, 191
HinP1I GCGC 2 cut(s) 95, 191
HincII GTYRAC 1 cut(s) 1208
HindII GTYRAC 1 cut(s) 1208
HindIII AAGCTT 1 cut(s) 1372
HpaII CCGG 1 cut(s) 98
HphI GGTGA 1 cut(s) 1465
Hpy166II GTNNAC 3 cut(s) 362, 1208, 1265
Hpy188I TCNGA 1 cut(s) 1092
Hpy188III TCNNGA 4 cut(s) 318, 606, 927, 1493
Hpy8I GTNNAC 3 cut(s) 362, 1208, 1265
Hpy99I CGWCG 1 cut(s) 721
HpyAV CCTTC 2 cut(s) 134, 1342
HpyCH4III ACNGT 2 cut(s) 1006, 1149
HpyCH4IV ACGT 1 cut(s) 760
HpyCH4V TGCA 9 cut(s) 75, 149, 404, 515, 553, 920, 1141, 1217, 1286
HpyF10VI GCNNNNNNNGC 4 cut(s) 159, 236, 722, 1070
HpyF3I CTNAG 3 cut(s) 1069, 1480, 1521
HpySE526I ACGT 1 cut(s) 760
Hsp92I GRCGYC 1 cut(s) 95
Hsp92II CATG 8 cut(s) 212, 315, 404, 422, 716, 1199, 1339, 1511
HspAI GCGC 2 cut(s) 95, 191
KasI GGCGCC 1 cut(s) 94
KroI GCCGGC 1 cut(s) 97
KroNI GCCGGC 1 cut(s) 99
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 3 cut(s) 385, 439, 1301
LmnI GCTCC 2 cut(s) 212, 1132
Lsp1109I GCAGC 3 cut(s) 133, 709, 1298
LweI GCATC 1 cut(s) 183
MaeI CTAG 5 cut(s) 657, 726, 830, 927, 945
MaeII ACGT 1 cut(s) 760
MaeIII GTNAC 4 cut(s) 233, 421, 662, 1511
MalI GATC 3 cut(s) 387, 441, 1303
MboI GATC 3 cut(s) 385, 439, 1301
MboII GAAGA 7 cut(s) 23, 45, 167, 269, 833, 931, 1090
MluCI AATT 6 cut(s) 532, 633, 930, 994, 1168, 1222
MluI ACGCGT 1 cut(s) 237
Mly113I GGCGCC 1 cut(s) 95
MlyI GAGTC 3 cut(s) 962, 1061, 1334
MmeI TCCRAC 2 cut(s) 436, 1131
MroNI GCCGGC 1 cut(s) 97
MroXI GAANNNNTTC 1 cut(s) 261
MseI TTAA 3 cut(s) 993, 1037, 1412
MslI CAYNNNNRTG 4 cut(s) 207, 435, 625, 1200
MspA1I CMGCKG 1 cut(s) 1289
MspI CCGG 1 cut(s) 98
MspR9I CCNGG 2 cut(s) 749, 1132
MvaI CCWGG 2 cut(s) 749, 1132
MvnI CGCG 1 cut(s) 239
MwoI GCNNNNNNNGC 4 cut(s) 159, 236, 722, 1070
NaeI GCCGGC 1 cut(s) 99
NarI GGCGCC 1 cut(s) 95
NdeI CATATG 1 cut(s) 187
NdeII GATC 3 cut(s) 385, 439, 1301
NgoMIV GCCGGC 1 cut(s) 97
NlaIII CATG 8 cut(s) 212, 315, 404, 422, 716, 1199, 1339, 1511
NlaIV GGNNCC 4 cut(s) 96, 167, 214, 1136
NmeAIII GCCGAG 1 cut(s) 1042
NmuCI GTSAC 1 cut(s) 233
NsbI TGCGCA 1 cut(s) 192
NspI RCATGY 1 cut(s) 422
OliI CACNNNNGTG 1 cut(s) 435
PasI CCCWGGG 1 cut(s) 1131
PceI AGGCCT 1 cut(s) 846
PciI ACATGT 1 cut(s) 418
PcsI WCGNNNNNNNCGW 1 cut(s) 1398
PdiI GCCGGC 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 261
PfeI GAWTC 7 cut(s) 408, 602, 774, 874, 1103, 1367, 1496
PflMI CCANNNNNTGG 1 cut(s) 312
PkrI GCNGC 3 cut(s) 148, 724, 1288
PleI GAGTC 3 cut(s) 961, 1061, 1334
PluTI GGCGCC 1 cut(s) 98
PpsI GAGTC 3 cut(s) 961, 1061, 1334
PpuMI RGGWCCY 2 cut(s) 165, 341
PscI ACATGT 1 cut(s) 418
Psp5II RGGWCCY 2 cut(s) 165, 341
Psp6I CCWGG 2 cut(s) 747, 1130
PspEI GGTNACC 1 cut(s) 1511
PspGI CCWGG 2 cut(s) 747, 1130
PspN4I GGNNCC 4 cut(s) 96, 167, 214, 1136
PspPI GGNCC 4 cut(s) 165, 341, 1135, 1329
PspPPI RGGWCCY 2 cut(s) 165, 341
PstI CTGCAG 1 cut(s) 151
PstNI CAGNNNCTG 1 cut(s) 281
PvuII CAGCTG 1 cut(s) 1289
RsaI GTAC 4 cut(s) 588, 734, 1045, 1445
RsaNI GTAC 4 cut(s) 587, 733, 1044, 1444
RseI CAYNNNNRTG 4 cut(s) 207, 435, 625, 1200
SaqAI TTAA 3 cut(s) 993, 1037, 1412
SatI GCNGC 3 cut(s) 147, 723, 1287
Sau3AI GATC 3 cut(s) 385, 439, 1301
Sau96I GGNCC 4 cut(s) 165, 341, 1135, 1329
SchI GAGTC 3 cut(s) 962, 1061, 1334
ScrFI CCNGG 2 cut(s) 749, 1132
SfaNI GCATC 1 cut(s) 183
SfcI CTRYAG 1 cut(s) 147
SfoI GGCGCC 1 cut(s) 96
SinI GGWCC 3 cut(s) 165, 341, 1329
SmiMI CAYNNNNRTG 4 cut(s) 207, 435, 625, 1200
SmlI CTYRAG 2 cut(s) 950, 1346
SmoI CTYRAG 2 cut(s) 950, 1346
Sse9I AATT 6 cut(s) 532, 633, 930, 994, 1168, 1222
SseBI AGGCCT 1 cut(s) 846
SspDI GGCGCC 1 cut(s) 94
SspI AATATT 2 cut(s) 368, 1256
SspMI CTAG 5 cut(s) 657, 726, 830, 927, 945
StuI AGGCCT 1 cut(s) 846
StyD4I CCNGG 2 cut(s) 747, 1130
StyI CCWWGG 1 cut(s) 879
TaaI ACNGT 2 cut(s) 1006, 1149
TaiI ACGT 1 cut(s) 763
TaqI TCGA 4 cut(s) 849, 1113, 1244, 1392
TasI AATT 6 cut(s) 532, 633, 930, 994, 1168, 1222
TatI WGTACW 3 cut(s) 586, 732, 1043
TfiI GAWTC 7 cut(s) 408, 602, 774, 874, 1103, 1367, 1496
Tru1I TTAA 3 cut(s) 993, 1037, 1412
Tru9I TTAA 3 cut(s) 993, 1037, 1412
TscAI CASTG 4 cut(s) 67, 96, 223, 511
TseFI GTSAC 1 cut(s) 233
TseI GCWGC 3 cut(s) 146, 722, 1286
Tsp45I GTSAC 1 cut(s) 233
TspRI CASTG 4 cut(s) 67, 96, 223, 511
Van91I CCANNNNNTGG 1 cut(s) 312
VpaK11BI GGWCC 3 cut(s) 165, 341, 1329
XapI RAATTY 2 cut(s) 532, 930
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 1 cut(s) 422
XcmI CCANNNNNNNNNTGG 1 cut(s) 1128
XmiI GTMKAC 1 cut(s) 361
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 5 cut(s) 657, 726, 830, 927, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.