Prupe.6G156600_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
13822686 .. 13831733
9048 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G156600.2

Sequence Viewer

Length: 1506 bp
ATGTTGAAAGTTTCACTACTGCTGTGTTTTCTTCTCATAAAATTTTCTTCAGGCACAGATAACTTTAGCAGAGATGACTTCCCACCGGGCTTTGTTTTTGGTGCTTCCTCCTCTGCTTATCAGGTGGAAGGTGCTGCAGACGAAGATGGGAGGACCCCAAGCATCTTGGACACATTTGCTCATGCCGGGAATTTTGATGGAGCCACTGGAGATGTAGCGTGTGATGAGTATCACAAATACAAGGAAGATGTCAAACTAATGGCAGATACGGGTTTAGAGGCGTATAGATTTTCAATCTCATGGTCAAGACTTATCCCAAATGGAAAAGGACCTGTGAATCCGAAGGGTGTACAATATTATAACAATCTTATTGATGAACTAATCAGCAATGGAATTCAGCCGCATGTTACTTTACACCACAGTGATCTCCCACAAGCACTTGAAGATGAGTATGGAGGATGGGTTGGTCGAGAGATTGTAAAAGACTTCACAGCATATGCAGATGTATGCTTCAAAACTTTTGGCGACAGAGTTCTGTATTGGACTACCATGAATGAACCTAATGTTTTTTCACTTGGGGGTTATGATATTGGATTTCTTCCGCCACAACGGTGTTCAGCTCCATTCGGTGTGAATTGTTCTAGGGGTAACTCCTCAGTAGAGCCATACATTGCAGTTCATCATCTATTGCTATCTCATGCATCGGCAGCTAGATTGTACAAGAAAAAGTACCAGGACAAGCAACATGGATTTGTAGGAATCAATGTATTTGCCTATTGGTTTGTTCCTCTAACAAAAACCATTGAAGATGAACTTGCGGCCCAAAGAGCCCTCGACTTTTATTCTGGTTGGATTTTGAATCCCTTGGTGTTTGGAGATTACCCTGATGTAATGAAAAAGAACGCAGGCTCTAGACTTCCTGCCTTTACTAGTTTGGAGTCCGAAAGTGTGAAGGGTTCATGTGACTTCCTGGGAATTAATTATTATAACACATTATACGCCACGGACTACTCTAGCGTCTTAAAGAAGGAAACGAGAGACTTTAATGCAGACTCGGGAATAAAGATTACGAGTCTACAAAATGATACAACATTTGAGTTTCCAATAACTCCCTGGGGCCTGCAACGACTACTGGAATATGTCAAGCAAAACTATGGAAATCCTCCAATATATATCCAAGAAAATGGTCAACGAACTCGACGCAATTCATCATTAGAGGATTGGCCAAGGGTGAAATATTTGGACGGACACATCCAAAATTTGCTTGAAGCTGTAAGGAATGGATCAAACGTCAGAGGCTATTTTATATGGTCCTTCTTGGATTCCCTTGAGCTGTTGGACGGCTATGAATCGAGCTACGGCCTCTACTACATCGATTTGGATGACCCCGATTTAAGAAGACAACCCAAACTCTCTGCTCACTGGTACTCCCAGTTTTTAAAGAGAAAGAACGTCATCAGCTTAGATGGGTTTATTAAATCCATTTCCCATGATCGCATTCAGTAG

Protein Analysis

502

Amino Acids

56.76

Weight (kDa)

5.51

Isoelectric Point (pI)

29.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 360, 987
AccI GTMKAC 1 cut(s) 1075
AciI CCGC 3 cut(s) 401, 602, 818
AclWI GGATC 1 cut(s) 1291
AcoI YGGCCR 1 cut(s) 1223
AcsI RAATTY 4 cut(s) 41, 190, 393, 1258
AcuI CTGAAG 1 cut(s) 33
AfaI GTAC 4 cut(s) 351, 719, 731, 1427
AgsI TTSAA 7 cut(s) 7, 294, 443, 514, 806, 859, 1268
AhlI ACTAGT 1 cut(s) 929
AjnI CCWGG 3 cut(s) 732, 969, 1112
AleI CACNNNNGTG 2 cut(s) 420, 610
AluBI AGCT 6 cut(s) 620, 710, 1271, 1333, 1356, 1461
AluI AGCT 6 cut(s) 620, 710, 1271, 1333, 1356, 1461
Alw26I GTCTC 1 cut(s) 1032
AlwI GGATC 1 cut(s) 1291
Ama87I CYCGRG 1 cut(s) 1054
AoxI GGCC 4 cut(s) 819, 1117, 1223, 1360
ApeKI GCWGC 2 cut(s) 134, 707
ApoI RAATTY 4 cut(s) 41, 190, 393, 1258
AseI ATTAAT 1 cut(s) 978
AspS9I GGNCC 5 cut(s) 153, 329, 820, 1117, 1311
AsuC2I CCSGG 2 cut(s) 87, 187
AsuHPI GGTGA 1 cut(s) 1243
AvaI CYCGRG 1 cut(s) 1054
AvaII GGWCC 3 cut(s) 153, 329, 1311
BalI TGGCCA 1 cut(s) 1225
BanII GRGCYC 1 cut(s) 832
BbsI GAAGAC 1 cut(s) 1405
BbvI GCAGC 2 cut(s) 121, 719
BccI CCATC 4 cut(s) 140, 191, 453, 1460
BceAI ACGGC 2 cut(s) 1357, 1375
BciT130I CCWGG 3 cut(s) 734, 971, 1114
BcnI CCSGG 2 cut(s) 87, 187
BcoDI GTCTC 1 cut(s) 1032
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 5 cut(s) 642, 711, 912, 930, 1014
BfmI CTRYAG 1 cut(s) 135
BisI GCNGC 4 cut(s) 135, 401, 708, 819
BlsI GCNGC 4 cut(s) 136, 402, 709, 820
Bme1390I CCNGG 5 cut(s) 87, 187, 734, 971, 1114
Bme18I GGWCC 3 cut(s) 153, 329, 1311
BmeT110I CYCGRG 1 cut(s) 1054
BmgT120I GGNCC 5 cut(s) 153, 329, 820, 1117, 1311
BmiI GGNNCC 3 cut(s) 155, 202, 1118
BmrFI CCNGG 5 cut(s) 87, 187, 734, 971, 1114
BmrI ACTGGG 1 cut(s) 1426
BmsI GCATC 2 cut(s) 171, 710
BmuI ACTGGG 1 cut(s) 1426
BpiI GAAGAC 1 cut(s) 1405
BpmI CTGGAG 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 1349
BpuMI CCSGG 2 cut(s) 87, 187
Bsa29I ATCGAT 1 cut(s) 1374
BsaBI GATNNNNATC 1 cut(s) 228
BsaJI CCNNGG 6 cut(s) 864, 970, 1002, 1112, 1113, 1226
BsaXI ACNNNNNCTCC 4 cut(s) 447, 477, 1412, 1442
Bse1I ACTGG 4 cut(s) 211, 1137, 1427, 1432
Bse3DI GCAATG 2 cut(s) 394, 669
Bse8I GATNNNNATC 1 cut(s) 228
BseBI CCWGG 3 cut(s) 734, 971, 1114
BseCI ATCGAT 1 cut(s) 1374
BseDI CCNNGG 6 cut(s) 864, 970, 1002, 1112, 1113, 1226
BseGI GGATG 3 cut(s) 464, 1251, 1387
BseJI GATNNNNATC 1 cut(s) 228
BseMI GCAATG 2 cut(s) 394, 669
BseMII CTCAG 1 cut(s) 669
BseNI ACTGG 4 cut(s) 211, 1137, 1427, 1432
BseRI GAGGAG 2 cut(s) 100, 643
BseXI GCAGC 2 cut(s) 121, 719
BshFI GGCC 4 cut(s) 821, 1119, 1225, 1362
BshVI ATCGAT 1 cut(s) 1374
BsiHKCI CYCGRG 1 cut(s) 1054
BsiSI CCGG 2 cut(s) 86, 186
BsmAI GTCTC 1 cut(s) 1032
BsmI GAATGC 1 cut(s) 1497
BsnI GGCC 4 cut(s) 821, 1119, 1225, 1362
BsoBI CYCGRG 1 cut(s) 1054
Bsp1286I GDGCHC 1 cut(s) 832
Bsp1407I TGTACA 2 cut(s) 349, 717
Bsp143I GATC 3 cut(s) 424, 1283, 1492
BspACI CCGC 3 cut(s) 401, 602, 818
BspANI GGCC 4 cut(s) 821, 1119, 1225, 1362
BspCNI CTCAG 1 cut(s) 668
BspDI ATCGAT 1 cut(s) 1374
BspLI GGNNCC 3 cut(s) 155, 202, 1118
BspMAI CTGCAG 1 cut(s) 139
BspPI GGATC 1 cut(s) 1291
BsrDI GCAATG 2 cut(s) 394, 669
BsrGI TGTACA 2 cut(s) 349, 717
BsrI ACTGG 4 cut(s) 211, 1137, 1427, 1432
BssECI CCNNGG 6 cut(s) 864, 970, 1002, 1112, 1113, 1226
BssMI GATC 3 cut(s) 424, 1283, 1492
BssT1I CCWWGG 2 cut(s) 864, 1226
Bst2UI CCWGG 3 cut(s) 734, 971, 1114
Bst4CI ACNGT 2 cut(s) 422, 612
BstAUI TGTACA 2 cut(s) 349, 717
BstC8I GCNNGC 2 cut(s) 907, 1121
BstDEI CTNAG 2 cut(s) 655, 1462
BstDSI CCRYGG 1 cut(s) 1002
BstF5I GGATG 3 cut(s) 464, 1251, 1387
BstKTI GATC 3 cut(s) 427, 1286, 1495
BstMAI GTCTC 1 cut(s) 1032
BstMBI GATC 3 cut(s) 424, 1283, 1492
BstMWI GCNNNNNNNGC 2 cut(s) 707, 827
BstNI CCWGG 3 cut(s) 734, 971, 1114
BstNSI RCATGY 1 cut(s) 407
BstSCI CCNGG 5 cut(s) 85, 185, 732, 969, 1112
BstSFI CTRYAG 1 cut(s) 135
BstV1I GCAGC 2 cut(s) 121, 719
BstV2I GAAGAC 1 cut(s) 1405
BstXI CCANNNNNNTGG 1 cut(s) 1184
Bsu15I ATCGAT 1 cut(s) 1374
BsuRI GGCC 4 cut(s) 821, 1119, 1225, 1362
BsuTUI ATCGAT 1 cut(s) 1374
BtgI CCRYGG 1 cut(s) 1002
BtsCI GGATG 3 cut(s) 464, 1251, 1387
BtsIMutI CAGTG 3 cut(s) 204, 427, 1420
Cac8I GCNNGC 2 cut(s) 907, 1121
Cfr13I GGNCC 5 cut(s) 153, 329, 820, 1117, 1311
ClaI ATCGAT 1 cut(s) 1374
CseI GACGC 2 cut(s) 1006, 1209
Csp6I GTAC 4 cut(s) 350, 718, 730, 1426
CviAII CATG 8 cut(s) 182, 300, 404, 550, 698, 746, 960, 1490
CviQI GTAC 4 cut(s) 350, 718, 730, 1426
DdeI CTNAG 2 cut(s) 655, 1462
DpnI GATC 3 cut(s) 426, 1285, 1494
DpnII GATC 3 cut(s) 424, 1283, 1492
DraI TTTAAA 1 cut(s) 1440
EaeI YGGCCR 1 cut(s) 1223
EciI GGCGGA 1 cut(s) 591
Eco130I CCWWGG 2 cut(s) 864, 1226
Eco24I GRGCYC 1 cut(s) 832
Eco47I GGWCC 3 cut(s) 153, 329, 1311
Eco57I CTGAAG 1 cut(s) 33
Eco88I CYCGRG 1 cut(s) 1054
EcoO109I RGGNCCY 3 cut(s) 153, 329, 1117
EcoRI GAATTC 1 cut(s) 393
EcoRII CCWGG 3 cut(s) 732, 969, 1112
EcoT14I CCWWGG 2 cut(s) 864, 1226
EcoT22I ATGCAT 1 cut(s) 703
EcoT38I GRGCYC 1 cut(s) 832
ErhI CCWWGG 2 cut(s) 864, 1226
FaeI CATG 8 cut(s) 185, 303, 407, 553, 701, 749, 963, 1493
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FatI CATG 8 cut(s) 181, 299, 403, 549, 697, 745, 959, 1489
FauNDI CATATG 1 cut(s) 496
FblI GTMKAC 1 cut(s) 1075
Fnu4HI GCNGC 4 cut(s) 135, 401, 708, 819
FokI GGATG 3 cut(s) 471, 1238, 1394
FriOI GRGCYC 1 cut(s) 832
Fsp4HI GCNGC 4 cut(s) 135, 401, 708, 819
FspBI CTAG 5 cut(s) 642, 711, 912, 930, 1014
GluI GCNGC 4 cut(s) 135, 401, 708, 819
GsuI CTGGAG 1 cut(s) 228
HaeIII GGCC 4 cut(s) 821, 1119, 1225, 1362
HapII CCGG 2 cut(s) 86, 186
HgaI GACGC 2 cut(s) 1006, 1209
Hin1II CATG 8 cut(s) 185, 303, 407, 553, 701, 749, 963, 1493
HincII GTYRAC 1 cut(s) 1190
HindII GTYRAC 1 cut(s) 1190
HinfI GANTC 8 cut(s) 337, 759, 859, 938, 1052, 1072, 1322, 1349
HpaII CCGG 2 cut(s) 86, 186
HphI GGTGA 1 cut(s) 1243
Hpy166II GTNNAC 3 cut(s) 350, 1076, 1190
Hpy188I TCNGA 3 cut(s) 342, 943, 1295
Hpy188III TCNNGA 4 cut(s) 306, 470, 912, 1056
Hpy8I GTNNAC 3 cut(s) 350, 1076, 1190
Hpy99I CGWCG 1 cut(s) 1203
HpyAV CCTTC 5 cut(s) 122, 337, 946, 1021, 1324
HpyCH4III ACNGT 2 cut(s) 422, 612
HpyCH4IV ACGT 2 cut(s) 1290, 1452
HpyCH4V TGCA 6 cut(s) 137, 500, 674, 701, 1049, 1123
HpyF10VI GCNNNNNNNGC 2 cut(s) 707, 827
HpyF3I CTNAG 2 cut(s) 655, 1462
HpySE526I ACGT 2 cut(s) 1290, 1452
Hsp92II CATG 8 cut(s) 185, 303, 407, 553, 701, 749, 963, 1493
Kzo9I GATC 3 cut(s) 424, 1283, 1492
LmnI GCTCC 2 cut(s) 200, 625
Lsp1109I GCAGC 2 cut(s) 121, 719
LweI GCATC 2 cut(s) 171, 710
MaeI CTAG 5 cut(s) 642, 711, 912, 930, 1014
MaeII ACGT 2 cut(s) 1290, 1452
MaeIII GTNAC 3 cut(s) 406, 647, 962
MalI GATC 3 cut(s) 426, 1285, 1494
MboI GATC 3 cut(s) 424, 1283, 1492
MboII GAAGA 8 cut(s) 23, 39, 155, 257, 455, 590, 818, 1410
MhlI GDGCHC 1 cut(s) 832
MlsI TGGCCA 1 cut(s) 1225
MluCI AATT 8 cut(s) 41, 190, 393, 634, 975, 979, 1204, 1258
MluNI TGGCCA 1 cut(s) 1225
MlyI GAGTC 3 cut(s) 947, 1046, 1081
MmeI TCCRAC 2 cut(s) 830, 1317
Mox20I TGGCCA 1 cut(s) 1225
Mph1103I ATGCAT 1 cut(s) 703
MscI TGGCCA 1 cut(s) 1225
MseI TTAA 6 cut(s) 978, 1022, 1044, 1394, 1439, 1476
MslI CAYNNNNRTG 2 cut(s) 420, 610
Msp20I TGGCCA 1 cut(s) 1225
MspI CCGG 2 cut(s) 86, 186
MspR9I CCNGG 5 cut(s) 87, 187, 734, 971, 1114
Mva1269I GAATGC 1 cut(s) 1497
MvaI CCWGG 3 cut(s) 734, 971, 1114
MwoI GCNNNNNNNGC 2 cut(s) 707, 827
NciI CCSGG 2 cut(s) 87, 187
NdeI CATATG 1 cut(s) 496
NdeII GATC 3 cut(s) 424, 1283, 1492
NlaIII CATG 8 cut(s) 185, 303, 407, 553, 701, 749, 963, 1493
NlaIV GGNNCC 3 cut(s) 155, 202, 1118
NmuCI GTSAC 1 cut(s) 962
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 1 cut(s) 407
OliI CACNNNNGTG 2 cut(s) 420, 610
PasI CCCWGGG 1 cut(s) 1113
PctI GAATGC 1 cut(s) 1497
PfeI GAWTC 5 cut(s) 337, 759, 859, 1322, 1349
PkrI GCNGC 4 cut(s) 136, 402, 709, 820
PleI GAGTC 3 cut(s) 946, 1046, 1080
PpsI GAGTC 3 cut(s) 946, 1046, 1080
PpuMI RGGWCCY 2 cut(s) 153, 329
PshBI ATTAAT 1 cut(s) 978
PsiI TTATAA 2 cut(s) 360, 987
Psp5II RGGWCCY 2 cut(s) 153, 329
Psp6I CCWGG 3 cut(s) 732, 969, 1112
PspGI CCWGG 3 cut(s) 732, 969, 1112
PspN4I GGNNCC 3 cut(s) 155, 202, 1118
PspPI GGNCC 5 cut(s) 153, 329, 820, 1117, 1311
PspPPI RGGWCCY 2 cut(s) 153, 329
PstI CTGCAG 1 cut(s) 139
RsaI GTAC 4 cut(s) 351, 719, 731, 1427
RsaNI GTAC 4 cut(s) 350, 718, 730, 1426
RseI CAYNNNNRTG 2 cut(s) 420, 610
SaqAI TTAA 6 cut(s) 978, 1022, 1044, 1394, 1439, 1476
SatI GCNGC 4 cut(s) 135, 401, 708, 819
Sau3AI GATC 3 cut(s) 424, 1283, 1492
Sau96I GGNCC 5 cut(s) 153, 329, 820, 1117, 1311
SchI GAGTC 3 cut(s) 947, 1046, 1081
ScrFI CCNGG 5 cut(s) 87, 187, 734, 971, 1114
SduI GDGCHC 1 cut(s) 832
SfaNI GCATC 2 cut(s) 171, 710
SfcI CTRYAG 1 cut(s) 135
SinI GGWCC 3 cut(s) 153, 329, 1311
SmiMI CAYNNNNRTG 2 cut(s) 420, 610
SmlI CTYRAG 1 cut(s) 1328
SmoI CTYRAG 1 cut(s) 1328
SpeI ACTAGT 1 cut(s) 929
Sse9I AATT 8 cut(s) 41, 190, 393, 634, 975, 979, 1204, 1258
SsiI CCGC 3 cut(s) 401, 602, 818
SspI AATATT 2 cut(s) 356, 1238
SspMI CTAG 5 cut(s) 642, 711, 912, 930, 1014
StyD4I CCNGG 5 cut(s) 85, 185, 732, 969, 1112
StyI CCWWGG 2 cut(s) 864, 1226
TaaI ACNGT 2 cut(s) 422, 612
TaiI ACGT 2 cut(s) 1293, 1455
TaqI TCGA 5 cut(s) 469, 834, 1198, 1352, 1374
TasI AATT 8 cut(s) 41, 190, 393, 634, 975, 979, 1204, 1258
TatI WGTACW 2 cut(s) 349, 717
TauI GCSGC 2 cut(s) 403, 821
TfiI GAWTC 5 cut(s) 337, 759, 859, 1322, 1349
Tru1I TTAA 6 cut(s) 978, 1022, 1044, 1394, 1439, 1476
Tru9I TTAA 6 cut(s) 978, 1022, 1044, 1394, 1439, 1476
TscAI CASTG 3 cut(s) 211, 427, 1427
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 2 cut(s) 134, 707
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 9 cut(s) 390, 566, 570, 668, 825, 908, 948, 1197, 1362
TspGWI ACGGA 2 cut(s) 1019, 1260
TspRI CASTG 3 cut(s) 211, 427, 1427
VpaK11BI GGWCC 3 cut(s) 153, 329, 1311
VspI ATTAAT 1 cut(s) 978
XapI RAATTY 4 cut(s) 41, 190, 393, 1258
XbaI TCTAGA 1 cut(s) 911
XceI RCATGY 1 cut(s) 407
XcmI CCANNNNNNNNNTGG 1 cut(s) 1110
XmiI GTMKAC 1 cut(s) 1075
XspI CTAG 5 cut(s) 642, 711, 912, 930, 1014
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.