Prupe.6G298600_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000980
Physical Location & Seq
Reverse (-)
27225168 .. 27227470
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G298600.1

Sequence Viewer

Length: 1602 bp
ATGACTGAGGAGGGTTTTCAGGTGGCAATGATATGCTGGTCACTTGTGTTGATTGGTATAATCAGTGTCTTAATGCGATTGGTTAAGGAGATGTGGCTGAAGCCTGCAAGGATTCGATCAGCGCTTTGGAGGCAAGGCATCAGAGGGCCAGCACCTTCCTTCATTTTTGGTAATGTTTCAGAGATGAAGAAGATTCAATCCAGCAATATCAACATCAATCAGAAACCATCTGGTGTTAAACGAGTGCAGCACAACTGGGTTCCCTCATTCTTTCCTTATCTTCAGCAATGGGAGCAGCAGTATGGTCAAGTGTACATGTACTCAACAGGGAGCAAGCAACACTTGTATGTGGGCGATCCCAAGTTGTTAAGGGAGCTGAAACTGCACAACTCCTTGGATTTGGGCAGACCTACATATCTGAGTAAGCCAATGCAGCCATTGCTAGGTGACAGCGTTATCCGGGCCAACGGAGAAGAATGGGCATACCAGAAGAAAATCATTGCTCCTGAATTCTTCCTCGACAAGGTTAAGGGCATGGTGGGTCTGATGGAGGAATCTACAAAGGCAATAATTAAGACATGGGAGAGCCGTATACTAGAAAGTGAGGAGGGCATTGTGGACATAACAATTGATGAGGATTTGAAAAGCCTCTCTGCTGATATCATATCAAGAGCTTGTTTTGGCAGCTCTTACTCCCAAGGCAACCAGATTTTTGCAAAGATTGCTACCCTCCAGGACACCTTGTCCCATCCAAGTTTGCTCTTTGGCTTTCTCAATTTTAGATTCCTTCCCACAGAAAATGACAAGAAGGTAAGGAGTTTAAAGAAAGAGGTGGACGCTTTGTTGCTCAAATTAGTGAGGGATCGTCAGGCTGAAAGCCAATCGTGTGGCACATCAGAAAAGGACTTATTACAAATGATACTTGAAAGTGCTGCTTCTAGCACTGAAATGCCTAGCCACAAAACAGACCAATTTATTCTGGACAATTGCAGAACTATCTACTTTGCAGGATCTGAGACCACTGCTCTTGCAGCATCCTGGACCTTGATGCTATTGGCATTACAACCCGAATGGCAAGATCGTGTTCGTGCTGAGATTTTTGAGGTCTGTGGGGATGATGATCAACTGCATCATTGCCTGCAAGACATGGACACCTTACGCAAATTGAAAACGCTGACAATGGTGATTCAAGAGAGCCTGCGGCTTTATGGACCGGGAGTCATAATGGCTAGGGAAGCTCTTACAAACATGAAGTTGGGGGACTTAGATGTGCCAGAAGGCATCCACATATGGACATTCATTCCAGCACTGCACCGTGACCCCGAAAATTGGGGTTCAGATGCTGATGAGTTTAAGCCAGAGAGGTTTGAAAATGGGGTATCCGAATCGTGCAAGTATCCCCAAGCATACATGCCATTTGGTTATGGGAGCCGATTGTGCATGGGCCAGACATTTGCCATGCTGCAGCTGAAGATAGTGCTCTCCCTCATTCTGTCCAAGTTCTCATTTTCCCTTTCTCCAAATTATCAACATTGCCCTGTTTACAAAATTTTGCTGCTGCCTCAACATGGAATCAAACTCCTTGTTAGGCGTGTGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

534

Amino Acids

60.75

Weight (kDa)

7.15

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 592
AciI CCGC 1 cut(s) 1201
AclWI GGATC 3 cut(s) 350, 870, 1018
AcsI RAATTY 2 cut(s) 509, 1548
AcuI CTGAAG 3 cut(s) 119, 266, 1490
AfaI GTAC 2 cut(s) 314, 320
AfeI AGCGCT 1 cut(s) 123
AfiI CCNNNNNNNGG 4 cut(s) 443, 523, 1329, 1568
AflIII ACRYGT 1 cut(s) 315
AgsI TTSAA 6 cut(s) 197, 643, 926, 1168, 1190, 1370
AhdI GACNNNNNGTC 2 cut(s) 742, 1217
AjnI CCWGG 2 cut(s) 732, 1037
AluBI AGCT 5 cut(s) 376, 674, 687, 1238, 1468
AluI AGCT 5 cut(s) 376, 674, 687, 1238, 1468
Alw21I GWGCWC 1 cut(s) 1482
Alw26I GTCTC 1 cut(s) 1010
AlwI GGATC 3 cut(s) 350, 870, 1018
AlwNI CAGNNNCTG 2 cut(s) 1013, 1343
Aor51HI AGCGCT 1 cut(s) 123
AoxI GGCC 3 cut(s) 146, 462, 1444
ApoI RAATTY 2 cut(s) 509, 1548
AspLEI GCGC 1 cut(s) 124
AspS9I GGNCC 5 cut(s) 146, 462, 1041, 1211, 1444
AsuC2I CCSGG 2 cut(s) 461, 1215
AsuHPI GGTGA 2 cut(s) 458, 1195
AvaII GGWCC 2 cut(s) 1041, 1211
Bbv12I GWGCWC 1 cut(s) 1482
BccI CCATC 3 cut(s) 235, 541, 756
BceAI ACGGC 1 cut(s) 573
BciT130I CCWGG 2 cut(s) 734, 1039
BciVI GTATCC 2 cut(s) 1390, 1407
BclI TGATCA 1 cut(s) 1120
BcnI CCSGG 2 cut(s) 461, 1215
BcoDI GTCTC 1 cut(s) 1010
BfaI CTAG 5 cut(s) 443, 596, 939, 954, 1230
BfmI CTRYAG 1 cut(s) 1463
BfoI RGCGCY 1 cut(s) 125
BfuI GTATCC 2 cut(s) 1390, 1407
Bme1390I CCNGG 4 cut(s) 461, 734, 1039, 1215
Bme18I GGWCC 2 cut(s) 1041, 1211
BmeRI GACNNNNNGTC 2 cut(s) 742, 1217
BmgT120I GGNCC 5 cut(s) 146, 462, 1041, 1211, 1444
BmiI GGNNCC 2 cut(s) 261, 1430
BmrFI CCNGG 4 cut(s) 461, 734, 1039, 1215
BmrI ACTGGG 1 cut(s) 265
BmsI GCATC 6 cut(s) 147, 1038, 1043, 1138, 1290, 1330
BmuI ACTGGG 1 cut(s) 265
BpmI CTGGAG 1 cut(s) 716
BpuMI CCSGG 2 cut(s) 461, 1215
BsaBI GATNNNNATC 1 cut(s) 1119
BsaI GGTCTC 1 cut(s) 1010
BsaJI CCNNGG 2 cut(s) 393, 697
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 4 cut(s) 443, 523, 1329, 1568
Bse1I ACTGG 1 cut(s) 260
Bse3DI GCAATG 6 cut(s) 33, 293, 437, 498, 1132, 1531
Bse8I GATNNNNATC 1 cut(s) 1119
BseBI CCWGG 2 cut(s) 734, 1039
BseDI CCNNGG 2 cut(s) 393, 697
BseGI GGATG 4 cut(s) 748, 1034, 1120, 1281
BseJI GATNNNNATC 1 cut(s) 1119
BseLI CCNNNNNNNGG 4 cut(s) 443, 523, 1329, 1568
BseMI GCAATG 6 cut(s) 33, 293, 437, 498, 1132, 1531
BseMII CTCAG 3 cut(s) 410, 1005, 1083
BseNI ACTGG 1 cut(s) 260
BseRI GAGGAG 2 cut(s) 23, 620
BsgI GTGCAG 3 cut(s) 266, 368, 1295
BshFI GGCC 3 cut(s) 148, 464, 1446
BsiHKAI GWGCWC 1 cut(s) 1482
BsiSI CCGG 2 cut(s) 460, 1214
BslFI GGGAC 2 cut(s) 730, 1274
BslI CCNNNNNNNGG 4 cut(s) 443, 523, 1329, 1568
BsmAI GTCTC 1 cut(s) 1010
BsmFI GGGAC 2 cut(s) 730, 1274
BsnI GGCC 3 cut(s) 148, 464, 1446
Bso31I GGTCTC 1 cut(s) 1010
Bsp1286I GDGCHC 1 cut(s) 1482
Bsp1407I TGTACA 1 cut(s) 312
Bsp143I GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
BspACI CCGC 1 cut(s) 1201
BspANI GGCC 3 cut(s) 148, 464, 1446
BspCNI CTCAG 3 cut(s) 411, 1006, 1084
BspLI GGNNCC 2 cut(s) 261, 1430
BspMAI CTGCAG 1 cut(s) 1467
BspPI GGATC 3 cut(s) 350, 870, 1018
BspTNI GGTCTC 1 cut(s) 1010
BsrDI GCAATG 6 cut(s) 33, 293, 437, 498, 1132, 1531
BsrGI TGTACA 1 cut(s) 312
BsrI ACTGG 1 cut(s) 260
BssECI CCNNGG 2 cut(s) 393, 697
BssMI GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
BssNAI GTATAC 1 cut(s) 593
BssT1I CCWWGG 2 cut(s) 393, 697
Bst1107I GTATAC 1 cut(s) 593
Bst2UI CCWGG 2 cut(s) 734, 1039
Bst4CI ACNGT 1 cut(s) 1316
BstAPI GCANNNNNTGC 2 cut(s) 439, 722
BstAUI TGTACA 1 cut(s) 312
BstC8I GCNNGC 5 cut(s) 105, 150, 335, 1139, 1199
BstDEI CTNAG 5 cut(s) 6, 419, 1014, 1092, 1264
BstENI CCTNNNNNAGG 1 cut(s) 521
BstF5I GGATG 4 cut(s) 748, 1034, 1120, 1281
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 1 cut(s) 124
BstKTI GATC 6 cut(s) 119, 358, 865, 1013, 1081, 1123
BstMAI GTCTC 1 cut(s) 1010
BstMBI GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
BstMWI GCNNNNNNNGC 9 cut(s) 130, 292, 382, 433, 439, 722, 1031, 1235, 1437
BstNI CCWGG 2 cut(s) 734, 1039
BstNSI RCATGY 2 cut(s) 319, 1414
BstSCI CCNGG 4 cut(s) 459, 732, 1037, 1213
BstSFI CTRYAG 1 cut(s) 1463
BstX2I RGATCY 1 cut(s) 1010
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 1 cut(s) 1010
BstZ17I GTATAC 1 cut(s) 593
BsuI GTATCC 2 cut(s) 1390, 1407
BsuRI GGCC 3 cut(s) 148, 464, 1446
BtsCI GGATG 4 cut(s) 748, 1034, 1120, 1281
BtsI GCAGTG 2 cut(s) 1020, 1307
BtsIMutI CAGTG 4 cut(s) 70, 942, 1020, 1307
Cac8I GCNNGC 5 cut(s) 105, 150, 335, 1139, 1199
CaiI CAGNNNCTG 2 cut(s) 1013, 1343
CfoI GCGC 1 cut(s) 124
Cfr13I GGNCC 5 cut(s) 146, 462, 1041, 1211, 1444
CseI GACGC 1 cut(s) 845
Csp6I GTAC 2 cut(s) 313, 319
CspCI CAANNNNNGTGG 2 cut(s) 1009, 1044
CviAII CATG 9 cut(s) 316, 535, 579, 1147, 1249, 1411, 1441, 1459, 1568
CviQI GTAC 2 cut(s) 313, 319
DdeI CTNAG 5 cut(s) 6, 419, 1014, 1092, 1264
DpnI GATC 6 cut(s) 118, 357, 864, 1012, 1080, 1122
DpnII GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
DraI TTTAAA 1 cut(s) 822
DriI GACNNNNNGTC 2 cut(s) 742, 1217
Eam1105I GACNNNNNGTC 2 cut(s) 742, 1217
Eco130I CCWWGG 2 cut(s) 393, 697
Eco31I GGTCTC 1 cut(s) 1010
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 2 cut(s) 1041, 1211
Eco47III AGCGCT 1 cut(s) 123
Eco57I CTGAAG 3 cut(s) 119, 266, 1490
EcoNI CCTNNNNNAGG 1 cut(s) 521
EcoRI GAATTC 1 cut(s) 509
EcoRII CCWGG 2 cut(s) 732, 1037
EcoRV GATATC 1 cut(s) 661
EcoT14I CCWWGG 2 cut(s) 393, 697
ErhI CCWWGG 2 cut(s) 393, 697
FaeI CATG 9 cut(s) 319, 538, 582, 1150, 1252, 1414, 1444, 1462, 1571
FalI AAGNNNNNCTT 4 cut(s) 326, 358, 919, 951
FaqI GGGAC 2 cut(s) 730, 1274
FatI CATG 9 cut(s) 315, 534, 578, 1146, 1248, 1410, 1440, 1458, 1567
FauNDI CATATG 1 cut(s) 1289
FbaI TGATCA 1 cut(s) 1120
FblI GTMKAC 1 cut(s) 592
FokI GGATG 4 cut(s) 735, 1021, 1127, 1268
FspBI CTAG 5 cut(s) 443, 596, 939, 954, 1230
GlaI GCGC 1 cut(s) 123
GsuI CTGGAG 1 cut(s) 716
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 3 cut(s) 148, 464, 1446
HapII CCGG 2 cut(s) 460, 1214
HgaI GACGC 1 cut(s) 845
HhaI GCGC 1 cut(s) 124
Hin1II CATG 9 cut(s) 319, 538, 582, 1150, 1252, 1414, 1444, 1462, 1571
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
HinfI GANTC 8 cut(s) 112, 193, 554, 783, 1186, 1218, 1385, 1572
HpaII CCGG 2 cut(s) 460, 1214
HphI GGTGA 2 cut(s) 458, 1195
Hpy166II GTNNAC 5 cut(s) 313, 593, 619, 835, 1543
Hpy188I TCNGA 9 cut(s) 143, 181, 222, 420, 546, 898, 1015, 1339, 1384
Hpy188III TCNNGA 4 cut(s) 506, 669, 980, 1190
Hpy8I GTNNAC 5 cut(s) 313, 593, 619, 835, 1543
HpyAV CCTTC 5 cut(s) 165, 169, 797, 802, 1271
HpyCH4III ACNGT 1 cut(s) 1316
HpyF10VI GCNNNNNNNGC 9 cut(s) 130, 292, 382, 433, 439, 722, 1031, 1235, 1437
HpyF3I CTNAG 5 cut(s) 6, 419, 1014, 1092, 1264
Hsp92II CATG 9 cut(s) 319, 538, 582, 1150, 1252, 1414, 1444, 1462, 1571
HspAI GCGC 1 cut(s) 122
Ksp22I TGATCA 1 cut(s) 1120
Kzo9I GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
LmnI GCTCC 5 cut(s) 292, 330, 373, 508, 1428
LweI GCATC 6 cut(s) 147, 1038, 1043, 1138, 1290, 1330
MaeI CTAG 5 cut(s) 443, 596, 939, 954, 1230
MaeIII GTNAC 3 cut(s) 39, 446, 1316
MalI GATC 6 cut(s) 118, 357, 864, 1012, 1080, 1122
MboI GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
MboII GAAGA 7 cut(s) 199, 202, 272, 485, 502, 505, 1483
MfeI CAATTG 2 cut(s) 627, 985
MflI RGATCY 1 cut(s) 1010
MhlI GDGCHC 1 cut(s) 1482
MlyI GAGTC 1 cut(s) 1227
MseI TTAA 8 cut(s) 71, 84, 237, 368, 528, 573, 821, 1353
MslI CAYNNNNRTG 2 cut(s) 345, 947
MspA1I CMGCKG 1 cut(s) 1468
MspI CCGG 2 cut(s) 460, 1214
MspR9I CCNGG 4 cut(s) 461, 734, 1039, 1215
MunI CAATTG 2 cut(s) 627, 985
MvaI CCWGG 2 cut(s) 734, 1039
MwoI GCNNNNNNNGC 9 cut(s) 130, 292, 382, 433, 439, 722, 1031, 1235, 1437
NciI CCSGG 2 cut(s) 461, 1215
NdeI CATATG 1 cut(s) 1289
NdeII GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
NlaIII CATG 9 cut(s) 319, 538, 582, 1150, 1252, 1414, 1444, 1462, 1571
NlaIV GGNNCC 2 cut(s) 261, 1430
NmuCI GTSAC 3 cut(s) 39, 446, 1316
NspI RCATGY 2 cut(s) 319, 1414
PciI ACATGT 1 cut(s) 315
PfeI GAWTC 7 cut(s) 112, 193, 554, 783, 1186, 1385, 1572
PfoI TCCNGGA 2 cut(s) 732, 1037
PleI GAGTC 1 cut(s) 1226
PpsI GAGTC 1 cut(s) 1226
PscI ACATGT 1 cut(s) 315
Psp6I CCWGG 2 cut(s) 732, 1037
PspGI CCWGG 2 cut(s) 732, 1037
PspN4I GGNNCC 2 cut(s) 261, 1430
PspPI GGNCC 5 cut(s) 146, 462, 1041, 1211, 1444
PstI CTGCAG 1 cut(s) 1467
PstNI CAGNNNCTG 2 cut(s) 1013, 1343
PsuI RGATCY 1 cut(s) 1010
PvuII CAGCTG 1 cut(s) 1468
RsaI GTAC 2 cut(s) 314, 320
RsaNI GTAC 2 cut(s) 313, 319
RseI CAYNNNNRTG 2 cut(s) 345, 947
SaqAI TTAA 8 cut(s) 71, 84, 237, 368, 528, 573, 821, 1353
Sau3AI GATC 6 cut(s) 116, 355, 862, 1010, 1078, 1120
Sau96I GGNCC 5 cut(s) 146, 462, 1041, 1211, 1444
SchI GAGTC 1 cut(s) 1227
ScrFI CCNGG 4 cut(s) 461, 734, 1039, 1215
SduI GDGCHC 1 cut(s) 1482
SfaNI GCATC 6 cut(s) 147, 1038, 1043, 1138, 1290, 1330
SfcI CTRYAG 1 cut(s) 1463
SinI GGWCC 2 cut(s) 1041, 1211
SmiMI CAYNNNNRTG 2 cut(s) 345, 947
SsiI CCGC 1 cut(s) 1201
SspMI CTAG 5 cut(s) 443, 596, 939, 954, 1230
StyD4I CCNGG 4 cut(s) 459, 732, 1037, 1213
StyI CCWWGG 2 cut(s) 393, 697
TaaI ACNGT 1 cut(s) 1316
TaqI TCGA 2 cut(s) 115, 519
TatI WGTACW 2 cut(s) 312, 318
TauI GCSGC 1 cut(s) 1204
TfiI GAWTC 7 cut(s) 112, 193, 554, 783, 1186, 1385, 1572
Tru1I TTAA 8 cut(s) 71, 84, 237, 368, 528, 573, 821, 1353
Tru9I TTAA 8 cut(s) 71, 84, 237, 368, 528, 573, 821, 1353
TscAI CASTG 4 cut(s) 70, 949, 1027, 1314
TseFI GTSAC 3 cut(s) 39, 446, 1316
Tsp45I GTSAC 3 cut(s) 39, 446, 1316
TspDTI ATGAA 4 cut(s) 151, 200, 1265, 1288
TspGWI ACGGA 1 cut(s) 483
TspRI CASTG 4 cut(s) 70, 949, 1027, 1314
VpaK11BI GGWCC 2 cut(s) 1041, 1211
XagI CCTNNNNNAGG 1 cut(s) 521
XapI RAATTY 2 cut(s) 509, 1548
XceI RCATGY 2 cut(s) 319, 1414
XmiI GTMKAC 1 cut(s) 592
XspI CTAG 5 cut(s) 443, 596, 939, 954, 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.