Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001767

Physical Location & Seq

Genomic Coordinates Forward (+)

18216602 .. 18218696

Gene Structure 2095 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G190000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGGAAAGGTACAAGTTTCAGTTGATGGAATACAAAAGGAACAAAAACATAAACTCAACCCCGACAAGGATTTGGTGGTGAACAAAGATGGAATTTTCATACAATACGAGTTTAATTATGAACCATCCCAGATCTACTTTACCGGAAAAATCTACTTCAAAAATGGCAAAGAAGGAGAAGCTCGATTTTTCAAATTCGAAAAATCAGAAGAGGACTTAGCAAAGAAGACATTTACCCTGACTTCCAAGTTAGCAAATTATGATCAGCGTGTGGGTGTCTTGAAACCTCACTTCCTCACCTATTATGAACCACAAAATATTTGGATTTTGTGCTACGAAAAATTCAATCATCTTCTAAGTGAAATAAATATTGATGCTGAGGATTTTGTCAATGGCGATTCTCGTATTCTATCTTTTTGGTGGCGCAGTTCCATACGGGACCTTTTACGAACGATAAAGCATATGCATTCTTGTAAGTTTTTTCATAAGGGTTTGAACGGAAGTGACAATTATGTTGTTGTTTCCGGTCGAGTCAAGATTATTAACATCCAAAGTAGTTTTGAAGATCTTGAAGATCCTCCTTCACAAGTAAATGTGTTGAGAATGAATGACTTAAAAGCATTTAGGAACATGTTAAAGGAAAAAATAATGTTGCCAGAAGATTCTTGGGTTGATCGTGATTCTTTCTTTGATTTCTTTGATAAAGAAGAATATCCGTACCATATATTTATTAAGAAACTAGCAACCCATCCCTTTTTATTAACTCCAGCTGAAAGAATGAAGAGTTTTTACAGTATACATGATTCTGCAAATGAAAGCAAGTTCAAGAGAAGATTAGATGGTAGGGAATTCTATAAGTATAGGGGATGGAATAGGAAAGATATGGTTCGTGAGTTCCAAAAGGTTTATAAAATTTTCAATTCGAAATATGACGGTGATTGTGTATGGGACCTTGTAGAATTTTTGAAAGATGTATATGAAGATGATAATCGTCGTGAGTTAACCCTTGATGCTGCCTATGCTGAGGTCAGAAGGTTGTACCCTGATTTCTTGGAGAAGATTCATGCCATCGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8

Protein Analysis

359

Amino Acids

42.88

Weight (kDa)

7.15

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001767)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g27671 FvH4_7g27672 FvH4_7g27711
malus_domestica	MD17G1269700.v1.1 MD17G1269800.v1.1
prunus_persica	Prupe.7G190000_v2.0.a1 Prupe.7G190100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0378671 RchiOBHm_Chr1g0379081 RchiOBHm_Chr1g0379131 RchiOBHm_Chr1g0379291 RchiOBHm_Chr1g0379311 RchiOBHm_Chr7g0205701 RchiOBHm_Chr7g0219851
rosa_laevigata	RLG00000002639 RLG00000026139 RLG00000026386 RLG00000026770
rosa_multiflora	Rmu_sc0000556.1_g000042 Rmu_sc0000556.1_g000049 Rmu_sc0000556.1_g000056
rosa_roxburghii	Rroxscaffold_1G00038740 Rroxscaffold_3G00244000 Rroxscaffold_3G00252070 Rroxscaffold_4G00277690
rosa_rugosa	Rorug07G0092400 Rorug07G0092400 Rorug07G0092400 Rorug07G0092500 Rorug07G0155600
rosa_samantha	Rh1AG463300 Rh1BG420400 Rh2BG637800 Rh2DG649300 Rh5DG295200 Rh7AG223600 Rh7BG218600 Rh7BG283600 Rh7BG284000 Rh7BG284200 Rh7BG284600 Rh7CG236900 Rh7CG311800 Rh7DG230500 Rh7DG230700 Rh7DG295400
rosa_wichuraiana	Rw1G037930 Rw7G019290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	909
AccI	GTMKAC	1 cut(s)	796
AclWI	GGATC	1 cut(s)	569
AcsI	RAATTY	6 cut(s)	93, 194, 341, 848, 912, 959
AfaI	GTAC	3 cut(s)	12, 719, 1040
AfiI	CCNNNNNNNGG	1 cut(s)	67
AflIII	ACRYGT	1 cut(s)	630
AluBI	AGCT	2 cut(s)	182, 770
AluI	AGCT	2 cut(s)	182, 770
AlwI	GGATC	1 cut(s)	569
ApeKI	GCWGC	1 cut(s)	1013
ApoI	RAATTY	6 cut(s)	93, 194, 341, 848, 912, 959
AspLEI	GCGC	1 cut(s)	426
AspS9I	GGNCC	2 cut(s)	439, 949
AsuHPI	GGTGA	3 cut(s)	91, 289, 947
AsuII	TTCGAA	2 cut(s)	198, 923
AvaII	GGWCC	2 cut(s)	439, 949
BarI	GAAGNNNNNNTAC	2 cut(s)	773, 805
BbsI	GAAGAC	1 cut(s)	233
BbvCI	CCTCAGC	2 cut(s)	378, 1023
BbvI	GCAGC	1 cut(s)	1000
BccI	CCATC	7 cut(s)	20, 83, 133, 756, 833, 861, 1076
BclI	TGATCA	1 cut(s)	262
BfaI	CTAG	1 cut(s)	740
BglII	AGATCT	2 cut(s)	132, 565
BisI	GCNGC	1 cut(s)	1014
BlsI	GCNGC	1 cut(s)	1015
Bme18I	GGWCC	2 cut(s)	439, 949
BmgT120I	GGNCC	2 cut(s)	439, 949
BmiI	GGNNCC	2 cut(s)	440, 950
BmsI	GCATC	2 cut(s)	364, 1000
BpiI	GAAGAC	1 cut(s)	233
BpmI	CTGGAG	1 cut(s)	750
Bpu10I	CCTNAGC	2 cut(s)	378, 1023
Bpu14I	TTCGAA	2 cut(s)	198, 923
BsaBI	GATNNNNATC	1 cut(s)	987
BsaWI	WCCGGW	2 cut(s)	143, 524
Bsc4I	CCNNNNNNNGG	1 cut(s)	67
Bse8I	GATNNNNATC	1 cut(s)	987
BseGI	GGATG	4 cut(s)	125, 546, 748, 872
BseJI	GATNNNNATC	1 cut(s)	987
BseLI	CCNNNNNNNGG	1 cut(s)	67
BseMII	CTCAG	2 cut(s)	369, 1014
BseXI	GCAGC	1 cut(s)	1000
Bsh1285I	CGRYCG	1 cut(s)	529
BsiEI	CGRYCG	1 cut(s)	529
BsiSI	CCGG	2 cut(s)	144, 525
BslFI	GGGAC	2 cut(s)	452, 962
BslI	CCNNNNNNNGG	1 cut(s)	67
BsmFI	GGGAC	2 cut(s)	452, 962
BsmI	GAATGC	1 cut(s)	466
Bsp119I	TTCGAA	2 cut(s)	198, 923
Bsp143I	GATC	5 cut(s)	132, 262, 565, 574, 673
BspCNI	CTCAG	2 cut(s)	370, 1015
BspLI	GGNNCC	2 cut(s)	440, 950
BspPI	GGATC	1 cut(s)	569
BspT104I	TTCGAA	2 cut(s)	198, 923
BssMI	GATC	5 cut(s)	132, 262, 565, 574, 673
BssNAI	GTATAC	1 cut(s)	797
Bst1107I	GTATAC	1 cut(s)	797
Bst4CI	ACNGT	2 cut(s)	794, 935
Bst6I	CTCTTC	2 cut(s)	204, 776
BstBI	TTCGAA	2 cut(s)	198, 923
BstDEI	CTNAG	4 cut(s)	217, 356, 378, 1023
BstF5I	GGATG	4 cut(s)	125, 546, 748, 872
BstHHI	GCGC	1 cut(s)	426
BstKTI	GATC	5 cut(s)	135, 265, 568, 577, 676
BstMBI	GATC	5 cut(s)	132, 262, 565, 574, 673
BstMCI	CGRYCG	1 cut(s)	529
BstMWI	GCNNNNNNNGC	1 cut(s)	1019
BstNSI	RCATGY	1 cut(s)	634
BstV1I	GCAGC	1 cut(s)	1000
BstV2I	GAAGAC	1 cut(s)	233
BstX2I	RGATCY	3 cut(s)	132, 565, 574
BstYI	RGATCY	3 cut(s)	132, 565, 574
BstZ17I	GTATAC	1 cut(s)	797
BtsCI	GGATG	4 cut(s)	125, 546, 748, 872
CfoI	GCGC	1 cut(s)	426
Cfr13I	GGNCC	2 cut(s)	439, 949
Csp6I	GTAC	3 cut(s)	11, 718, 1039
CviAII	CATG	3 cut(s)	631, 800, 1064
CviJI	RGCY	2 cut(s)	182, 770
CviKI_1	RGCY	2 cut(s)	182, 770
CviQI	GTAC	3 cut(s)	11, 718, 1039
DdeI	CTNAG	4 cut(s)	217, 356, 378, 1023
DpnI	GATC	5 cut(s)	134, 264, 567, 576, 675
DpnII	GATC	5 cut(s)	132, 262, 565, 574, 673
Eam1104I	CTCTTC	2 cut(s)	204, 776
EarI	CTCTTC	2 cut(s)	204, 776
Eco47I	GGWCC	2 cut(s)	439, 949
EcoO109I	RGGNCCY	2 cut(s)	439, 949
EcoRI	GAATTC	1 cut(s)	848
EcoT22I	ATGCAT	1 cut(s)	468
FaeI	CATG	3 cut(s)	634, 803, 1067
FaqI	GGGAC	2 cut(s)	452, 962
FatI	CATG	3 cut(s)	630, 799, 1063
FauNDI	CATATG	1 cut(s)	462
FbaI	TGATCA	1 cut(s)	262
FblI	GTMKAC	1 cut(s)	796
Fnu4HI	GCNGC	1 cut(s)	1014
FokI	GGATG	4 cut(s)	112, 533, 735, 879
Fsp4HI	GCNGC	1 cut(s)	1014
FspBI	CTAG	1 cut(s)	740
GlaI	GCGC	1 cut(s)	425
GluI	GCNGC	1 cut(s)	1014
GsuI	CTGGAG	1 cut(s)	750
HapII	CCGG	2 cut(s)	144, 525
HhaI	GCGC	1 cut(s)	426
Hin1II	CATG	3 cut(s)	634, 803, 1067
Hin6I	GCGC	1 cut(s)	424
HinP1I	GCGC	1 cut(s)	424
HincII	GTYRAC	1 cut(s)	1002
HindII	GTYRAC	1 cut(s)	1002
HinfI	GANTC	6 cut(s)	398, 531, 662, 680, 803, 1060
HpaI	GTTAAC	1 cut(s)	1002
HpaII	CCGG	2 cut(s)	144, 525
HphI	GGTGA	3 cut(s)	91, 289, 947
Hpy166II	GTNNAC	3 cut(s)	82, 797, 1002
Hpy188I	TCNGA	2 cut(s)	208, 1031
Hpy188III	TCNNGA	7 cut(s)	280, 535, 569, 677, 826, 890, 995
Hpy8I	GTNNAC	3 cut(s)	82, 797, 1002
Hpy99I	CGWCG	1 cut(s)	996
HpyAV	CCTTC	3 cut(s)	167, 591, 1026
HpyCH4III	ACNGT	2 cut(s)	794, 935
HpyCH4V	TGCA	2 cut(s)	466, 809
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1019
HpyF3I	CTNAG	4 cut(s)	217, 356, 378, 1023
Hsp92II	CATG	3 cut(s)	634, 803, 1067
HspAI	GCGC	1 cut(s)	424
Ksp22I	TGATCA	1 cut(s)	262
KspAI	GTTAAC	1 cut(s)	1002
Kzo9I	GATC	5 cut(s)	132, 262, 565, 574, 673
LpnPI	CCDG	7 cut(s)	143, 157, 251, 538, 669, 780, 1056
Lsp1109I	GCAGC	1 cut(s)	1000
LweI	GCATC	2 cut(s)	364, 1000
MaeI	CTAG	1 cut(s)	740
MaeIII	GTNAC	1 cut(s)	503
MalI	GATC	5 cut(s)	134, 264, 567, 576, 675
MboI	GATC	5 cut(s)	132, 262, 565, 574, 673
MflI	RGATCY	3 cut(s)	132, 565, 574
MlyI	GAGTC	1 cut(s)	540
MnlI	CCTC	6 cut(s)	205, 297, 305, 373, 588, 1018
Mph1103I	ATGCAT	1 cut(s)	468
MseI	TTAA	7 cut(s)	114, 543, 614, 635, 732, 761, 1001
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	2 cut(s)	144, 525
Mva1269I	GAATGC	1 cut(s)	466
MwoI	GCNNNNNNNGC	1 cut(s)	1019
NdeI	CATATG	1 cut(s)	462
NdeII	GATC	5 cut(s)	132, 262, 565, 574, 673
NlaIII	CATG	3 cut(s)	634, 803, 1067
NlaIV	GGNNCC	2 cut(s)	440, 950
NmuCI	GTSAC	1 cut(s)	503
NsiI	ATGCAT	1 cut(s)	468
NspI	RCATGY	1 cut(s)	634
NspV	TTCGAA	2 cut(s)	198, 923
PciI	ACATGT	1 cut(s)	630
PctI	GAATGC	1 cut(s)	466
PfeI	GAWTC	5 cut(s)	398, 662, 680, 803, 1060
PkrI	GCNGC	1 cut(s)	1015
PleI	GAGTC	1 cut(s)	539
PpsI	GAGTC	1 cut(s)	539
PpuMI	RGGWCCY	2 cut(s)	439, 949
PscI	ACATGT	1 cut(s)	630
PsiI	TTATAA	1 cut(s)	909
Psp5II	RGGWCCY	2 cut(s)	439, 949
PspN4I	GGNNCC	2 cut(s)	440, 950
PspPI	GGNCC	2 cut(s)	439, 949
PspPPI	RGGWCCY	2 cut(s)	439, 949
PsuI	RGATCY	3 cut(s)	132, 565, 574
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	3 cut(s)	12, 719, 1040
RsaNI	GTAC	3 cut(s)	11, 718, 1039
SaqAI	TTAA	7 cut(s)	114, 543, 614, 635, 732, 761, 1001
SatI	GCNGC	1 cut(s)	1014
Sau3AI	GATC	5 cut(s)	132, 262, 565, 574, 673
Sau96I	GGNCC	2 cut(s)	439, 949
SchI	GAGTC	1 cut(s)	540
SfaNI	GCATC	2 cut(s)	364, 1000
SfuI	TTCGAA	2 cut(s)	198, 923
SinI	GGWCC	2 cut(s)	439, 949
SspI	AATATT	2 cut(s)	319, 370
SspMI	CTAG	1 cut(s)	740
TaaI	ACNGT	2 cut(s)	794, 935
TaqI	TCGA	4 cut(s)	184, 198, 529, 923
TfiI	GAWTC	5 cut(s)	398, 662, 680, 803, 1060
Tru1I	TTAA	7 cut(s)	114, 543, 614, 635, 732, 761, 1001
Tru9I	TTAA	7 cut(s)	114, 543, 614, 635, 732, 761, 1001
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	1 cut(s)	1013
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	9 cut(s)	88, 135, 321, 473, 620, 794, 828, 993, 1052
TspGWI	ACGGA	2 cut(s)	513, 705
VpaK11BI	GGWCC	2 cut(s)	439, 949
XapI	RAATTY	6 cut(s)	93, 194, 341, 848, 912, 959
XceI	RCATGY	1 cut(s)	634
XcmI	CCANNNNNNNNNTGG	2 cut(s)	318, 663
XmiI	GTMKAC	1 cut(s)	796
XspI	CTAG	1 cut(s)	740
Zsp2I	ATGCAT	1 cut(s)	468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.