Rw7G019290

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0001767
Physical Location & Seq
Forward (+)
21350805 .. 21352884
2080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019290.1

Sequence Viewer

Length: 1062 bp
ATGACTATTGGAACCAATCCGTCTGGCTCCAAGTCAGGCAAATCGTTTGGTCATGAAAAATTACGGTTTCGGAATGGTAGAGTGAGGCCTGTTTCATTTATTTGTTATAAAGAAGAGAAAGGACTCACATATGAATGCCAAGGACGAAGGGTGTACCAGATTGAGTATGAGTCTAAAAAGATCAGTGATGCAGGAATCCTGAAGCTATTGGATGTGACTTCTTGTCCGGAAAACAAAATGCACTTTATCTTCTATGAGAAATTTGACCGCTTTCTGTTCGGAAATTGGTTCAAGAATCACCCAAATGGGATGAGAGACCAGCATGGGGATATAAAACCTTGGGTTCAAGATTCAATTAGGGATGTCATGGTGACCATAAAGAACATGTTGAACCGTCGGTTACTCCATTCAGGACTAGGAGATTTGAAGAACTATGTTATTGCAGAAGGCAAGATCAAGATAATTAACATCATGAGCAGTTGGGAGGACTTGGTCGACCCTCAAAAATTGAAAAATGGAGAAGATGTTCAGACTTTGGTGGGCAAGAGAAGCTTAAACTCTCTCATAAGGAAAGAGATAACAAGTGTAAAGAAACTATGGCAAACTCTTTTGAAATCTGATGATGCCTGGCCTGAGAGAGATTACTTCCTCAGTATCTTTGATCAGAACCTACACCCGTGGGATGTTCACATAGATAAAATAATTACTCACCCATTCTTGAAGACTTCGGAAGGGAGGGTCAAGTATTTTTCAGAGATACATCGTCAGCATATGACTGATTCAATTCCAAGACCTGATGTATTCTACAAGGCCATAAGAAATCATTTTGGTAAGTATCGTGGCACCGTAAACTCTGTGAATTTGAGCCGTCAGTTGAAAGCACTCTACACTTCTGATACATATGGCAAACCCATTACTTATCGCAATACCATATTGGGCCTTTTGCGGTTCTTAAGGAATGCTTACGAGCACCGTGGTGCAGACTTTCCTGTGTGTGACTTGGATAGAGAGATTAGAAAGCATTGGCCAGGCTTTCTCGAGAAACTTCATGAGAAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

353

Amino Acids

41.48

Weight (kDa)

9.57

Isoelectric Point (pI)

29.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 108
AccB1I GGYRCC 1 cut(s) 842
AccI GTMKAC 1 cut(s) 495
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 2 cut(s) 268, 946
AcoI YGGCCR 1 cut(s) 1025
AcsI RAATTY 2 cut(s) 260, 859
AcuI CTGAAG 1 cut(s) 221
AfaI GTAC 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 325
AflII CTTAAG 1 cut(s) 952
AflIII ACRYGT 1 cut(s) 384
AhdI GACNNNNNGTC 1 cut(s) 222
AjnI CCWGG 2 cut(s) 626, 1027
AleI CACNNNNGTG 1 cut(s) 975
AloI GAACNNNNNNTCC 2 cut(s) 510, 542
AluBI AGCT 3 cut(s) 205, 552, 1057
AluI AGCT 3 cut(s) 205, 552, 1057
Alw21I GWGCWC 1 cut(s) 972
Alw26I GTCTC 1 cut(s) 309
Ama87I CYCGRG 1 cut(s) 1037
Aor13HI TCCGGA 1 cut(s) 226
AoxI GGCC 5 cut(s) 86, 629, 810, 937, 1025
ApoI RAATTY 2 cut(s) 260, 859
Asp700I GAANNNNTTC 1 cut(s) 525
AspS9I GGNCC 1 cut(s) 937
AsuHPI GGTGA 3 cut(s) 290, 382, 701
AvaI CYCGRG 1 cut(s) 1037
BalI TGGCCA 1 cut(s) 1027
BanI GGYRCC 1 cut(s) 842
BbsI GAAGAC 1 cut(s) 728
Bbv12I GWGCWC 1 cut(s) 972
BceAI ACGGC 1 cut(s) 852
BciT130I CCWGG 2 cut(s) 628, 1029
BclI TGATCA 1 cut(s) 661
BcoDI GTCTC 1 cut(s) 309
BfaI CTAG 1 cut(s) 416
BfrI CTTAAG 1 cut(s) 952
Bme1390I CCNGG 2 cut(s) 628, 1029
BmeRI GACNNNNNGTC 1 cut(s) 222
BmeT110I CYCGRG 1 cut(s) 1037
BmgT120I GGNCC 1 cut(s) 937
BmiI GGNNCC 3 cut(s) 13, 28, 844
BmrFI CCNGG 2 cut(s) 628, 1029
BmsI GCATC 2 cut(s) 178, 613
BpiI GAAGAC 1 cut(s) 728
BsaI GGTCTC 1 cut(s) 309
BsaJI CCNNGG 4 cut(s) 139, 338, 677, 973
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 2 cut(s) 510, 540
Bsc4I CCNNNNNNNGG 1 cut(s) 325
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 2 cut(s) 628, 1029
BseDI CCNNGG 4 cut(s) 139, 338, 677, 973
BseGI GGATG 4 cut(s) 217, 315, 367, 688
BseLI CCNNNNNNNGG 1 cut(s) 325
BseMII CTCAG 2 cut(s) 624, 664
BsgI GTGCAG 1 cut(s) 999
BshFI GGCC 5 cut(s) 88, 631, 812, 939, 1027
BshNI GGYRCC 1 cut(s) 842
BsiHKAI GWGCWC 1 cut(s) 972
BsiHKCI CYCGRG 1 cut(s) 1037
BsiSI CCGG 1 cut(s) 227
BslI CCNNNNNNNGG 1 cut(s) 325
BsmAI GTCTC 1 cut(s) 309
BsmI GAATGC 2 cut(s) 140, 964
BsnI GGCC 5 cut(s) 88, 631, 812, 939, 1027
Bso31I GGTCTC 1 cut(s) 309
BsoBI CYCGRG 1 cut(s) 1037
Bsp1286I GDGCHC 1 cut(s) 972
Bsp13I TCCGGA 1 cut(s) 226
Bsp143I GATC 3 cut(s) 180, 453, 661
BspACI CCGC 2 cut(s) 268, 946
BspANI GGCC 5 cut(s) 88, 631, 812, 939, 1027
BspCNI CTCAG 2 cut(s) 625, 663
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 3 cut(s) 52, 471, 1048
BspLI GGNNCC 3 cut(s) 13, 28, 844
BspT107I GGYRCC 1 cut(s) 842
BspTI CTTAAG 1 cut(s) 952
BspTNI GGTCTC 1 cut(s) 309
BssECI CCNNGG 4 cut(s) 139, 338, 677, 973
BssMI GATC 3 cut(s) 180, 453, 661
BssT1I CCWWGG 2 cut(s) 139, 338
Bst2UI CCWGG 2 cut(s) 628, 1029
Bst4CI ACNGT 4 cut(s) 66, 395, 847, 974
Bst6I CTCTTC 1 cut(s) 108
BstAFI CTTAAG 1 cut(s) 952
BstDEI CTNAG 2 cut(s) 633, 650
BstDSI CCRYGG 2 cut(s) 677, 973
BstEII GGTNACC 1 cut(s) 370
BstF5I GGATG 4 cut(s) 217, 315, 367, 688
BstKTI GATC 3 cut(s) 183, 456, 664
BstMAI GTCTC 1 cut(s) 309
BstMBI GATC 3 cut(s) 180, 453, 661
BstMWI GCNNNNNNNGC 1 cut(s) 549
BstNI CCWGG 2 cut(s) 628, 1029
BstNSI RCATGY 1 cut(s) 388
BstPI GGTNACC 1 cut(s) 370
BstSCI CCNGG 2 cut(s) 626, 1027
BstV2I GAAGAC 1 cut(s) 728
BsuRI GGCC 5 cut(s) 88, 631, 812, 939, 1027
BtgI CCRYGG 2 cut(s) 677, 973
BtsCI GGATG 4 cut(s) 217, 315, 367, 688
BtsIMutI CAGTG 1 cut(s) 190
CciI TCATGA 3 cut(s) 52, 471, 1048
Cfr13I GGNCC 1 cut(s) 937
Csp6I GTAC 1 cut(s) 154
CviAII CATG 6 cut(s) 53, 323, 367, 385, 472, 1049
CviQI GTAC 1 cut(s) 154
DdeI CTNAG 2 cut(s) 633, 650
DpnI GATC 3 cut(s) 182, 455, 663
DpnII GATC 3 cut(s) 180, 453, 661
DriI GACNNNNNGTC 1 cut(s) 222
EaeI YGGCCR 1 cut(s) 1025
Eam1104I CTCTTC 1 cut(s) 108
Eam1105I GACNNNNNGTC 1 cut(s) 222
EarI CTCTTC 1 cut(s) 108
Eco130I CCWWGG 2 cut(s) 139, 338
Eco147I AGGCCT 1 cut(s) 88
Eco31I GGTCTC 1 cut(s) 309
Eco57I CTGAAG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 1037
Eco91I GGTNACC 1 cut(s) 370
EcoO65I GGTNACC 1 cut(s) 370
EcoRII CCWGG 2 cut(s) 626, 1027
EcoT14I CCWWGG 2 cut(s) 139, 338
ErhI CCWWGG 2 cut(s) 139, 338
FaeI CATG 6 cut(s) 56, 326, 370, 388, 475, 1052
FalI AAGNNNNNCTT 4 cut(s) 536, 568, 946, 978
FatI CATG 6 cut(s) 52, 322, 366, 384, 471, 1048
FauNDI CATATG 3 cut(s) 130, 771, 901
FbaI TGATCA 1 cut(s) 661
FblI GTMKAC 1 cut(s) 495
FokI GGATG 4 cut(s) 224, 322, 374, 695
FspBI CTAG 1 cut(s) 416
HaeIII GGCC 5 cut(s) 88, 631, 812, 939, 1027
HapII CCGG 1 cut(s) 227
Hin1II CATG 6 cut(s) 56, 326, 370, 388, 475, 1052
HincII GTYRAC 1 cut(s) 496
HindII GTYRAC 1 cut(s) 496
HindIII AAGCTT 1 cut(s) 550
HinfI GANTC 6 cut(s) 123, 170, 195, 295, 350, 779
HpaII CCGG 1 cut(s) 227
HphI GGTGA 3 cut(s) 290, 382, 701
Hpy166II GTNNAC 4 cut(s) 154, 496, 688, 850
Hpy188I TCNGA 8 cut(s) 72, 281, 531, 619, 666, 730, 754, 895
Hpy8I GTNNAC 4 cut(s) 154, 496, 688, 850
Hpy99I CGWCG 1 cut(s) 399
HpyAV CCTTC 3 cut(s) 141, 440, 725
HpyCH4III ACNGT 4 cut(s) 66, 395, 847, 974
HpyCH4V TGCA 4 cut(s) 191, 241, 443, 980
HpyF10VI GCNNNNNNNGC 1 cut(s) 549
HpyF3I CTNAG 2 cut(s) 633, 650
Hsp92II CATG 6 cut(s) 56, 326, 370, 388, 475, 1052
Kpn2I TCCGGA 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 661
Kzo9I GATC 3 cut(s) 180, 453, 661
LmnI GCTCC 1 cut(s) 32
LweI GCATC 2 cut(s) 178, 613
MaeI CTAG 1 cut(s) 416
MaeIII GTNAC 4 cut(s) 214, 370, 399, 995
MalI GATC 3 cut(s) 182, 455, 663
MboI GATC 3 cut(s) 180, 453, 661
MboII GAAGA 5 cut(s) 125, 241, 439, 533, 733
MhlI GDGCHC 1 cut(s) 972
MlsI TGGCCA 1 cut(s) 1027
MluCI AATT 9 cut(s) 59, 260, 283, 354, 462, 506, 702, 783, 859
MluNI TGGCCA 1 cut(s) 1027
MlyI GAGTC 2 cut(s) 117, 179
MnlI CCTC 5 cut(s) 78, 478, 510, 659, 729
Mox20I TGGCCA 1 cut(s) 1027
MroI TCCGGA 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 525
MscI TGGCCA 1 cut(s) 1027
MseI TTAA 3 cut(s) 465, 554, 953
MslI CAYNNNNRTG 3 cut(s) 133, 303, 975
Msp20I TGGCCA 1 cut(s) 1027
MspCI CTTAAG 1 cut(s) 952
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 2 cut(s) 628, 1029
Mva1269I GAATGC 2 cut(s) 140, 964
MvaI CCWGG 2 cut(s) 628, 1029
MwoI GCNNNNNNNGC 1 cut(s) 549
NdeI CATATG 3 cut(s) 130, 771, 901
NdeII GATC 3 cut(s) 180, 453, 661
NlaIII CATG 6 cut(s) 56, 326, 370, 388, 475, 1052
NlaIV GGNNCC 3 cut(s) 13, 28, 844
NmuCI GTSAC 3 cut(s) 214, 370, 995
NspI RCATGY 1 cut(s) 388
OliI CACNNNNGTG 1 cut(s) 975
PaeR7I CTCGAG 1 cut(s) 1037
PagI TCATGA 3 cut(s) 52, 471, 1048
PceI AGGCCT 1 cut(s) 88
PciI ACATGT 1 cut(s) 384
PctI GAATGC 2 cut(s) 140, 964
PdmI GAANNNNTTC 1 cut(s) 525
PfeI GAWTC 4 cut(s) 195, 295, 350, 779
PflFI GACNNNGTC 1 cut(s) 491
PleI GAGTC 2 cut(s) 117, 178
PpsI GAGTC 2 cut(s) 117, 178
PscI ACATGT 1 cut(s) 384
PsiI TTATAA 1 cut(s) 108
Psp6I CCWGG 2 cut(s) 626, 1027
PspEI GGTNACC 1 cut(s) 370
PspGI CCWGG 2 cut(s) 626, 1027
PspN4I GGNNCC 3 cut(s) 13, 28, 844
PspPI GGNCC 1 cut(s) 937
PsyI GACNNNGTC 1 cut(s) 491
RsaI GTAC 1 cut(s) 155
RsaNI GTAC 1 cut(s) 154
RseI CAYNNNNRTG 3 cut(s) 133, 303, 975
SalI GTCGAC 1 cut(s) 494
SaqAI TTAA 3 cut(s) 465, 554, 953
Sau3AI GATC 3 cut(s) 180, 453, 661
Sau96I GGNCC 1 cut(s) 937
SchI GAGTC 2 cut(s) 117, 179
ScrFI CCNGG 2 cut(s) 628, 1029
SduI GDGCHC 1 cut(s) 972
SetI ASST 6 cut(s) 207, 340, 554, 672, 796, 1059
SfaNI GCATC 2 cut(s) 178, 613
Sfr274I CTCGAG 1 cut(s) 1037
SlaI CTCGAG 1 cut(s) 1037
SmiMI CAYNNNNRTG 3 cut(s) 133, 303, 975
SmlI CTYRAG 2 cut(s) 952, 1037
SmoI CTYRAG 2 cut(s) 952, 1037
Sse9I AATT 9 cut(s) 59, 260, 283, 354, 462, 506, 702, 783, 859
SseBI AGGCCT 1 cut(s) 88
SsiI CCGC 2 cut(s) 268, 946
SspMI CTAG 1 cut(s) 416
StuI AGGCCT 1 cut(s) 88
StyD4I CCNGG 2 cut(s) 626, 1027
StyI CCWWGG 2 cut(s) 139, 338
TaaI ACNGT 4 cut(s) 66, 395, 847, 974
TaqI TCGA 2 cut(s) 495, 1038
TasI AATT 9 cut(s) 59, 260, 283, 354, 462, 506, 702, 783, 859
TfiI GAWTC 4 cut(s) 195, 295, 350, 779
Tru1I TTAA 3 cut(s) 465, 554, 953
Tru9I TTAA 3 cut(s) 465, 554, 953
TscAI CASTG 1 cut(s) 190
TseFI GTSAC 3 cut(s) 214, 370, 995
Tsp45I GTSAC 3 cut(s) 214, 370, 995
TspDTI ATGAA 4 cut(s) 69, 84, 147, 1037
TspGWI ACGGA 1 cut(s) 9
TspRI CASTG 1 cut(s) 190
Tth111I GACNNNGTC 1 cut(s) 491
Vha464I CTTAAG 1 cut(s) 952
XapI RAATTY 2 cut(s) 260, 859
XceI RCATGY 1 cut(s) 388
XhoI CTCGAG 1 cut(s) 1037
XmiI GTMKAC 1 cut(s) 495
XmnI GAANNNNTTC 1 cut(s) 525
XspI CTAG 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.