Rh7DG230700

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0001767
Physical Location & Seq
Forward (+)
22841073 .. 22844495
3423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG230700.1

Sequence Viewer

Length: 1254 bp
ATGGGCCAGAGAAGACTCACCTGTCGTCCGGAGTTGAGGAAGAAGACTCTCAAGAATATCTCCATCTTAGACTTGGCGGGTCATTGCTATCTCCTTCGCTCTCTTGCACCCGCCCACTCTGAAGGTAGGCATACAACATTGGTGCTGCCGCAACGGAAATTTTCGGAACAGATATTTCAGAGGTCGTTTGATATGACTATTGGAACCAATCCGTCCGGCTTCAAGTCAGGCAAATCGTTTGGTCATGAAAAATTACGGTTTCGGAATGGTAGAGTGAGGCCTGCTTCATTTATTTGTTATAAAGAAGAGAAAGGACTCACATATGAACGCCAAGGGCGAAGGGTGTACCAGATTGAGTATGAGTCTAAAAAGATCAGTGATGCAGGAATCCTGCAGCTATTGGATGTGACTTCTTGTCCGGAAAAGAAAATGCACTTTATCTTCTATGAGAAATTTGACCGCTTTCTGTTCGGAAATTGGTTCAAGAATCACCCAAATGGGATGAGAGACCAGCATGGGGATATAAAACCTTGGGTTCAAGATTCAATTAGGGATGTCATGGTGACCATAAAGAACATGTTGAACCGTCGGTTACTCCATTCAGGACTAGGAGATTTGAAGAACTATGTTATTGCAGAAGGCAAGATCAAGATAATTAACATCATGAGCAGTTGGGAGGACTTGGTCGACCCTCAAAAATTGAAAAATGGAGAAGATGTTCAGACTTTGGTGGGCAAGAGAAGCTTAAACTCTCTCACAAGGAAAGAGATAACAAGTGTAAAGAAACTATGGCAAACTCTTTTGAAATCTGATAATGCCTGGCCTGAGAGAGATTACTTCCTCAGTATCTTTGATCAGAACCTACACCCGTGGGATGTTCACATAGAGAAAATAATTACTCACCCATTCTTGAAGACTTCGGAAGGGAGGGTCAAGTATTTTTCAGAGATACATCGTCAGCATATGACTGATTCAATTCCAAGACCTGATGTATTCTACAAGGCCATAAGAAATCATTTTGGTAAGTATCGTGGCACCATAAACTCTGTGAATATGAGCCGTCAGTTGAAAGCACTCTACACTTCTGATACATATGGCAAACCCATTACTTATGGCAACACCATATTGGGCCTTTTGCGGTTCTTAAGGAATGCTTACGAGCACCGTGGTGCAGACTTTCCTGTGTGTGACTTGGATAGAGAGATTAGAAAGCATTGGCCGGGCTTTCTCGAGAAACTTCATGAGAAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

417

Amino Acids

48.96

Weight (kDa)

9.78

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AasI GACNNNNNNGTC 1 cut(s) 21
AccB1I GGYRCC 1 cut(s) 1034
AccI GTMKAC 1 cut(s) 687
AccIII TCCGGA 2 cut(s) 28, 418
AciI CCGC 5 cut(s) 77, 111, 149, 460, 1138
AcoI YGGCCR 1 cut(s) 1217
AcsI RAATTY 2 cut(s) 158, 452
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 1 cut(s) 347
AfiI CCNNNNNNNGG 1 cut(s) 517
AflII CTTAAG 1 cut(s) 1144
AflIII ACRYGT 1 cut(s) 576
AhdI GACNNNNNGTC 1 cut(s) 414
AjnI CCWGG 1 cut(s) 818
AleI CACNNNNGTG 1 cut(s) 1167
AloI GAACNNNNNNTCC 2 cut(s) 702, 734
AluBI AGCT 3 cut(s) 397, 744, 1249
AluI AGCT 3 cut(s) 397, 744, 1249
Alw21I GWGCWC 1 cut(s) 1164
Alw26I GTCTC 1 cut(s) 501
Ama87I CYCGRG 1 cut(s) 1229
Aor13HI TCCGGA 2 cut(s) 28, 418
AoxI GGCC 6 cut(s) 4, 278, 821, 1002, 1129, 1217
ApeKI GCWGC 2 cut(s) 145, 394
ApoI RAATTY 2 cut(s) 158, 452
Asp700I GAANNNNTTC 1 cut(s) 717
AspS9I GGNCC 2 cut(s) 4, 1129
AsuC2I CCSGG 1 cut(s) 1221
AsuHPI GGTGA 4 cut(s) 10, 482, 574, 893
AvaI CYCGRG 1 cut(s) 1229
BanI GGYRCC 1 cut(s) 1034
BbsI GAAGAC 3 cut(s) 19, 50, 920
Bbv12I GWGCWC 1 cut(s) 1164
BbvI GCAGC 2 cut(s) 132, 406
BccI CCATC 1 cut(s) 71
BceAI ACGGC 1 cut(s) 1044
BciT130I CCWGG 1 cut(s) 820
BclI TGATCA 1 cut(s) 853
BcnI CCSGG 1 cut(s) 1221
BcoDI GTCTC 1 cut(s) 501
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 1 cut(s) 392
BfrI CTTAAG 1 cut(s) 1144
BisI GCNGC 3 cut(s) 146, 149, 395
BlsI GCNGC 3 cut(s) 147, 150, 396
Bme1390I CCNGG 2 cut(s) 820, 1221
BmeRI GACNNNNNGTC 1 cut(s) 414
BmeT110I CYCGRG 1 cut(s) 1229
BmgT120I GGNCC 2 cut(s) 4, 1129
BmiI GGNNCC 2 cut(s) 205, 1036
BmrFI CCNGG 2 cut(s) 820, 1221
BmsI GCATC 1 cut(s) 370
BpiI GAAGAC 3 cut(s) 19, 50, 920
BpuEI CTTGAG 1 cut(s) 35
BpuMI CCSGG 1 cut(s) 1221
BsaI GGTCTC 1 cut(s) 501
BsaJI CCNNGG 4 cut(s) 331, 530, 869, 1165
BsaWI WCCGGW 2 cut(s) 28, 418
BsaXI ACNNNNNCTCC 2 cut(s) 702, 732
Bsc4I CCNNNNNNNGG 1 cut(s) 517
Bse3DI GCAATG 1 cut(s) 82
BseAI TCCGGA 2 cut(s) 28, 418
BseBI CCWGG 1 cut(s) 820
BseDI CCNNGG 4 cut(s) 331, 530, 869, 1165
BseGI GGATG 4 cut(s) 409, 507, 559, 880
BseLI CCNNNNNNNGG 1 cut(s) 517
BseMI GCAATG 1 cut(s) 82
BseMII CTCAG 2 cut(s) 816, 856
BseXI GCAGC 2 cut(s) 132, 406
BsgI GTGCAG 1 cut(s) 1191
BshFI GGCC 6 cut(s) 6, 280, 823, 1004, 1131, 1219
BshNI GGYRCC 1 cut(s) 1034
BsiHKAI GWGCWC 1 cut(s) 1164
BsiHKCI CYCGRG 1 cut(s) 1229
BsiSI CCGG 4 cut(s) 29, 216, 419, 1220
BslI CCNNNNNNNGG 1 cut(s) 517
BsmAI GTCTC 1 cut(s) 501
BsmI GAATGC 1 cut(s) 1156
BsnI GGCC 6 cut(s) 6, 280, 823, 1004, 1131, 1219
Bso31I GGTCTC 1 cut(s) 501
BsoBI CYCGRG 1 cut(s) 1229
Bsp1286I GDGCHC 1 cut(s) 1164
Bsp13I TCCGGA 2 cut(s) 28, 418
Bsp143I GATC 3 cut(s) 372, 645, 853
BspACI CCGC 5 cut(s) 77, 111, 149, 460, 1138
BspANI GGCC 6 cut(s) 6, 280, 823, 1004, 1131, 1219
BspCNI CTCAG 2 cut(s) 817, 855
BspEI TCCGGA 2 cut(s) 28, 418
BspHI TCATGA 3 cut(s) 244, 663, 1240
BspLI GGNNCC 2 cut(s) 205, 1036
BspMAI CTGCAG 1 cut(s) 396
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 1 cut(s) 1144
BspTNI GGTCTC 1 cut(s) 501
BsrDI GCAATG 1 cut(s) 82
BssECI CCNNGG 4 cut(s) 331, 530, 869, 1165
BssMI GATC 3 cut(s) 372, 645, 853
BssT1I CCWWGG 2 cut(s) 331, 530
Bst2UI CCWGG 1 cut(s) 820
Bst4CI ACNGT 3 cut(s) 258, 587, 1166
Bst6I CTCTTC 1 cut(s) 300
BstAFI CTTAAG 1 cut(s) 1144
BstC8I GCNNGC 1 cut(s) 282
BstDEI CTNAG 3 cut(s) 67, 825, 842
BstDSI CCRYGG 2 cut(s) 869, 1165
BstEII GGTNACC 1 cut(s) 562
BstF5I GGATG 4 cut(s) 409, 507, 559, 880
BstKTI GATC 3 cut(s) 375, 648, 856
BstMAI GTCTC 1 cut(s) 501
BstMBI GATC 3 cut(s) 372, 645, 853
BstMWI GCNNNNNNNGC 1 cut(s) 741
BstNI CCWGG 1 cut(s) 820
BstNSI RCATGY 1 cut(s) 580
BstPI GGTNACC 1 cut(s) 562
BstSCI CCNGG 2 cut(s) 818, 1219
BstSFI CTRYAG 1 cut(s) 392
BstV1I GCAGC 2 cut(s) 132, 406
BstV2I GAAGAC 3 cut(s) 19, 50, 920
BsuRI GGCC 6 cut(s) 6, 280, 823, 1004, 1131, 1219
BtgI CCRYGG 2 cut(s) 869, 1165
BtsCI GGATG 4 cut(s) 409, 507, 559, 880
BtsIMutI CAGTG 1 cut(s) 382
Cac8I GCNNGC 1 cut(s) 282
CciI TCATGA 3 cut(s) 244, 663, 1240
Cfr13I GGNCC 2 cut(s) 4, 1129
Csp6I GTAC 1 cut(s) 346
CviAII CATG 6 cut(s) 245, 515, 559, 577, 664, 1241
CviQI GTAC 1 cut(s) 346
DdeI CTNAG 3 cut(s) 67, 825, 842
DpnI GATC 3 cut(s) 374, 647, 855
DpnII GATC 3 cut(s) 372, 645, 853
DrdI GACNNNNNNGTC 1 cut(s) 21
DriI GACNNNNNGTC 1 cut(s) 414
DseDI GACNNNNNNGTC 1 cut(s) 21
EaeI YGGCCR 1 cut(s) 1217
Eam1104I CTCTTC 1 cut(s) 300
Eam1105I GACNNNNNGTC 1 cut(s) 414
EarI CTCTTC 1 cut(s) 300
Eco130I CCWWGG 2 cut(s) 331, 530
Eco147I AGGCCT 1 cut(s) 280
Eco31I GGTCTC 1 cut(s) 501
Eco57I CTGAAG 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 1229
Eco91I GGTNACC 1 cut(s) 562
EcoO65I GGTNACC 1 cut(s) 562
EcoRII CCWGG 1 cut(s) 818
EcoT14I CCWWGG 2 cut(s) 331, 530
ErhI CCWWGG 2 cut(s) 331, 530
FaeI CATG 6 cut(s) 248, 518, 562, 580, 667, 1244
FalI AAGNNNNNCTT 4 cut(s) 728, 760, 1138, 1170
FatI CATG 6 cut(s) 244, 514, 558, 576, 663, 1240
FauI CCCGC 2 cut(s) 70, 118
FauNDI CATATG 3 cut(s) 322, 963, 1093
FbaI TGATCA 1 cut(s) 853
FblI GTMKAC 1 cut(s) 687
Fnu4HI GCNGC 3 cut(s) 146, 149, 395
FokI GGATG 4 cut(s) 416, 514, 566, 887
Fsp4HI GCNGC 3 cut(s) 146, 149, 395
FspBI CTAG 1 cut(s) 608
GluI GCNGC 3 cut(s) 146, 149, 395
HaeIII GGCC 6 cut(s) 6, 280, 823, 1004, 1131, 1219
HapII CCGG 4 cut(s) 29, 216, 419, 1220
Hin1II CATG 6 cut(s) 248, 518, 562, 580, 667, 1244
HincII GTYRAC 1 cut(s) 688
HindII GTYRAC 1 cut(s) 688
HindIII AAGCTT 1 cut(s) 742
HinfI GANTC 8 cut(s) 15, 46, 315, 362, 387, 487, 542, 971
HpaII CCGG 4 cut(s) 29, 216, 419, 1220
HphI GGTGA 4 cut(s) 10, 482, 574, 893
Hpy166II GTNNAC 3 cut(s) 346, 688, 880
Hpy8I GTNNAC 3 cut(s) 346, 688, 880
Hpy99I CGWCG 1 cut(s) 591
HpyAV CCTTC 5 cut(s) 104, 116, 333, 632, 917
HpyCH4III ACNGT 3 cut(s) 258, 587, 1166
HpyCH4V TGCA 6 cut(s) 107, 383, 394, 433, 635, 1172
HpyF10VI GCNNNNNNNGC 1 cut(s) 741
HpyF3I CTNAG 3 cut(s) 67, 825, 842
Hsp92II CATG 6 cut(s) 248, 518, 562, 580, 667, 1244
Kpn2I TCCGGA 2 cut(s) 28, 418
Ksp22I TGATCA 1 cut(s) 853
Kzo9I GATC 3 cut(s) 372, 645, 853
Lsp1109I GCAGC 2 cut(s) 132, 406
LweI GCATC 1 cut(s) 370
MaeI CTAG 1 cut(s) 608
MaeIII GTNAC 4 cut(s) 406, 562, 591, 1187
MalI GATC 3 cut(s) 374, 647, 855
MboI GATC 3 cut(s) 372, 645, 853
MboII GAAGA 8 cut(s) 24, 52, 55, 317, 433, 631, 725, 925
MhlI GDGCHC 1 cut(s) 1164
MluCI AATT 9 cut(s) 158, 251, 452, 475, 546, 654, 698, 894, 975
MlyI GAGTC 4 cut(s) 9, 40, 309, 371
MnlI CCTC 7 cut(s) 30, 174, 270, 670, 702, 851, 921
MroI TCCGGA 2 cut(s) 28, 418
MroXI GAANNNNTTC 1 cut(s) 717
MseI TTAA 3 cut(s) 657, 746, 1145
MslI CAYNNNNRTG 2 cut(s) 495, 1167
MspCI CTTAAG 1 cut(s) 1144
MspI CCGG 4 cut(s) 29, 216, 419, 1220
MspR9I CCNGG 2 cut(s) 820, 1221
Mva1269I GAATGC 1 cut(s) 1156
MvaI CCWGG 1 cut(s) 820
MwoI GCNNNNNNNGC 1 cut(s) 741
NciI CCSGG 1 cut(s) 1221
NdeI CATATG 3 cut(s) 322, 963, 1093
NdeII GATC 3 cut(s) 372, 645, 853
NlaIII CATG 6 cut(s) 248, 518, 562, 580, 667, 1244
NlaIV GGNNCC 2 cut(s) 205, 1036
NmuCI GTSAC 3 cut(s) 406, 562, 1187
NspI RCATGY 1 cut(s) 580
OliI CACNNNNGTG 1 cut(s) 1167
PaeR7I CTCGAG 1 cut(s) 1229
PagI TCATGA 3 cut(s) 244, 663, 1240
PceI AGGCCT 1 cut(s) 280
PciI ACATGT 1 cut(s) 576
PcsI WCGNNNNNNNCGW 1 cut(s) 334
PctI GAATGC 1 cut(s) 1156
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 4 cut(s) 387, 487, 542, 971
PflFI GACNNNGTC 1 cut(s) 683
PkrI GCNGC 3 cut(s) 147, 150, 396
PleI GAGTC 4 cut(s) 9, 40, 309, 370
PpsI GAGTC 4 cut(s) 9, 40, 309, 370
PscI ACATGT 1 cut(s) 576
PsiI TTATAA 1 cut(s) 300
Psp6I CCWGG 1 cut(s) 818
PspEI GGTNACC 1 cut(s) 562
PspGI CCWGG 1 cut(s) 818
PspN4I GGNNCC 2 cut(s) 205, 1036
PspPI GGNCC 2 cut(s) 4, 1129
PstI CTGCAG 1 cut(s) 396
PsyI GACNNNGTC 1 cut(s) 683
RsaI GTAC 1 cut(s) 347
RsaNI GTAC 1 cut(s) 346
RseI CAYNNNNRTG 2 cut(s) 495, 1167
SalI GTCGAC 1 cut(s) 686
SaqAI TTAA 3 cut(s) 657, 746, 1145
SatI GCNGC 3 cut(s) 146, 149, 395
Sau3AI GATC 3 cut(s) 372, 645, 853
Sau96I GGNCC 2 cut(s) 4, 1129
SchI GAGTC 4 cut(s) 9, 40, 309, 371
ScrFI CCNGG 2 cut(s) 820, 1221
SduI GDGCHC 1 cut(s) 1164
SetI ASST 9 cut(s) 23, 127, 185, 399, 532, 746, 864, 988, 1251
SfaNI GCATC 1 cut(s) 370
SfcI CTRYAG 1 cut(s) 392
Sfr274I CTCGAG 1 cut(s) 1229
SlaI CTCGAG 1 cut(s) 1229
SmiMI CAYNNNNRTG 2 cut(s) 495, 1167
SmlI CTYRAG 3 cut(s) 50, 1144, 1229
SmoI CTYRAG 3 cut(s) 50, 1144, 1229
Sse9I AATT 9 cut(s) 158, 251, 452, 475, 546, 654, 698, 894, 975
SseBI AGGCCT 1 cut(s) 280
SsiI CCGC 5 cut(s) 77, 111, 149, 460, 1138
SspMI CTAG 1 cut(s) 608
StuI AGGCCT 1 cut(s) 280
StyD4I CCNGG 2 cut(s) 818, 1219
StyI CCWWGG 2 cut(s) 331, 530
TaaI ACNGT 3 cut(s) 258, 587, 1166
TaqI TCGA 2 cut(s) 687, 1230
TasI AATT 9 cut(s) 158, 251, 452, 475, 546, 654, 698, 894, 975
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 4 cut(s) 387, 487, 542, 971
Tru1I TTAA 3 cut(s) 657, 746, 1145
Tru9I TTAA 3 cut(s) 657, 746, 1145
TscAI CASTG 1 cut(s) 382
TseFI GTSAC 3 cut(s) 406, 562, 1187
TseI GCWGC 2 cut(s) 145, 394
Tsp45I GTSAC 3 cut(s) 406, 562, 1187
TspDTI ATGAA 4 cut(s) 261, 276, 339, 1229
TspGWI ACGGA 2 cut(s) 169, 201
TspRI CASTG 1 cut(s) 382
Tth111I GACNNNGTC 1 cut(s) 683
Vha464I CTTAAG 1 cut(s) 1144
XapI RAATTY 2 cut(s) 158, 452
XceI RCATGY 1 cut(s) 580
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XhoI CTCGAG 1 cut(s) 1229
XmiI GTMKAC 1 cut(s) 687
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.