Prupe.7G200800_v2.0.a1

12-oxophytodienoate reductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
18734192 .. 18736470
2279 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G200800.1

Sequence Viewer

Length: 1191 bp
ATGGCGGAGGCTTCATCTCAGGGACCCACTCTCTTTTCTCCGTTCAAGATGGGCAAGTTCAATCTGTCTCACAGGGTGGTGCTTGCGCCGATGACGAGGTGCCGAGCGTTGAACGGCTTGCCGCAGCCGGCGCTGGCCGAGTACTACACTCAAAGGTCAACCAACGGCGGCTTTCTGATCACCGAAGGCACTTTGGTCTCCGACACTGGCGCCGGGTTTCCACATGTTCCTGGGATTTACAATGATGAACAGGTGGAGGCATGGAAGAAGGTGGTGGATGCCGTTCACGCCAAAGGTGCCATTATTTTCTGTCAACTTTGGCATGTAGGTCGTGCTTCTCATGAAGTTTACCAACCTGGTGGGGGTTCACCAATATCTTCAACCGATGTTCCCATTTCGAGGAGGTGGAGAATTCTATTACCGGATGCGTCTCATGCCACTTACCCTAAGCCTAGACGCTTAGAAACCCCTGAAATCCTCCAAGTGGTGGAGCATTATCGACAGGCTGCCTTGAATGCCATTAGAGCAGGTTTTGATGGAATTGAGATTCATGGGGCACATGGCTACCTCATTGATCAATTCTTGAAAGATGGGATCAATGATCGAACAGATGAGTATGGCGGATCACTTGCAAACCGTTGCAAATTCTTGCTTCAGGTGGTTCAAGCAGTAGTTGGAGCCGTAGGTGCTGATAGGGTTGGTGTCAGAATCTCACCAGCCATTGATCACCTTGATGCAGTTGACTCTGCTCCACTTACCCTAGGCCTTGGAGTGATTGAAAGGCTCAACAAGCTTCAACAAGACTGGGGCTCAAAACTCACTTATCTCCATGTTACTCAGCCCCGTTACGCAGCATATGGCCAAACCGAATCTGGCAAACCTGGCAGTGATGAAGAGGAAGCTGTGTTTATGAGGACTTTAAGAAATGCTTATCGTGGTACATTTGTTGCTAGTGGTGGGTACACTAGGGAGCTTGGAATTCATGCTGTGGCTTCTAGGGATGCTGATTTAGTGTCTTATGGTCGCCTTTTTATCTCGAACCCCGACTTGGTTTTGAGATTGAAGCTTAATGCACCTTTGACCAGGTATAACAGGAAGACTTTCTACACGCAAGACCCTGTTGTTGGGTACACAGACTACCCTTTTCTGAGCAATGCAAATGGGAAAGAGGAACCACTCTCCCGCCTCTGA

Protein Analysis

397

Amino Acids

43.57

Weight (kDa)

8.29

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 518
AccB1I GGYRCC 3 cut(s) 99, 209, 296
AccB7I CCANNNNNTGG 1 cut(s) 487
AciI CCGC 5 cut(s) 5, 122, 168, 621, 1183
AclWI GGATC 2 cut(s) 602, 631
AcoI YGGCCR 2 cut(s) 135, 859
AcsI RAATTY 3 cut(s) 411, 644, 978
AcuI CTGAAG 1 cut(s) 638
AcyI GRCGYC 1 cut(s) 210
AdeI CACNNNGTG 1 cut(s) 76
AfaI GTAC 4 cut(s) 143, 940, 962, 1130
AfiI CCNNNNNNNGG 6 cut(s) 362, 399, 484, 487, 1048, 1124
AflIII ACRYGT 1 cut(s) 223
AjnI CCWGG 4 cut(s) 229, 355, 880, 1082
AjuI GAANNNNNNNTTGG 2 cut(s) 1031, 1063
AluBI AGCT 4 cut(s) 793, 902, 973, 1066
AluI AGCT 4 cut(s) 793, 902, 973, 1066
Alw26I GTCTC 3 cut(s) 72, 202, 435
AlwI GGATC 2 cut(s) 602, 631
AoxI GGCC 3 cut(s) 135, 763, 859
ApeKI GCWGC 3 cut(s) 124, 506, 851
ApoI RAATTY 3 cut(s) 411, 644, 978
Asp700I GAANNNNTTC 1 cut(s) 1100
AspA2I CCTAGG 1 cut(s) 760
AspLEI GCGC 3 cut(s) 88, 133, 212
AspS9I GGNCC 1 cut(s) 23
AsuC2I CCSGG 1 cut(s) 214
AsuHPI GGTGA 4 cut(s) 172, 360, 705, 719
AvaII GGWCC 1 cut(s) 23
AvrII CCTAGG 1 cut(s) 760
BaeGI GKGCMC 1 cut(s) 559
BaeI ACNNNNGTAYC 2 cut(s) 930, 963
BalI TGGCCA 1 cut(s) 861
BanI GGYRCC 3 cut(s) 99, 209, 296
BanII GRGCYC 1 cut(s) 812
BarI GAAGNNNNNNTAC 2 cut(s) 1088, 1120
BbsI GAAGAC 1 cut(s) 1103
BbvI GCAGC 3 cut(s) 136, 493, 863
BccI CCATC 3 cut(s) 43, 530, 584
BceAI ACGGC 4 cut(s) 130, 181, 266, 665
BcgI CGANNNNNNTGC 2 cut(s) 311, 345
BciT130I CCWGG 4 cut(s) 231, 357, 882, 1084
BclI TGATCA 3 cut(s) 177, 574, 724
BcnI CCSGG 1 cut(s) 214
BcoDI GTCTC 3 cut(s) 72, 202, 435
BfaI CTAG 5 cut(s) 453, 761, 951, 966, 996
BfoI RGCGCY 2 cut(s) 134, 213
BfuAI ACCTGC 1 cut(s) 518
BisI GCNGC 5 cut(s) 122, 125, 169, 507, 852
BlnI CCTAGG 1 cut(s) 760
BlsI GCNGC 5 cut(s) 123, 126, 170, 508, 853
BmcAI AGTACT 1 cut(s) 143
Bme1390I CCNGG 5 cut(s) 214, 231, 357, 882, 1084
Bme18I GGWCC 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 23
BmiI GGNNCC 7 cut(s) 24, 25, 101, 211, 298, 679, 1173
BmrFI CCNGG 5 cut(s) 214, 231, 357, 882, 1084
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 4 cut(s) 268, 415, 724, 991
BmuI ACTGGG 1 cut(s) 814
BpiI GAAGAC 1 cut(s) 1103
Bpu10I CCTNAGC 1 cut(s) 447
BpuMI CCSGG 1 cut(s) 214
BsaHI GRCGYC 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 202
BsaJI CCNNGG 3 cut(s) 230, 760, 766
BsaWI WCCGGW 1 cut(s) 421
Bsc4I CCNNNNNNNGG 6 cut(s) 362, 399, 484, 487, 1048, 1124
Bse118I RCCGGY 1 cut(s) 127
Bse1I ACTGG 2 cut(s) 211, 809
Bse3DI GCAATG 1 cut(s) 1159
BseBI CCWGG 4 cut(s) 231, 357, 882, 1084
BseDI CCNNGG 3 cut(s) 230, 760, 766
BseGI GGATG 3 cut(s) 283, 430, 1006
BseLI CCNNNNNNNGG 6 cut(s) 362, 399, 484, 487, 1048, 1124
BseMI GCAATG 1 cut(s) 1159
BseMII CTCAG 3 cut(s) 32, 851, 1139
BseNI ACTGG 2 cut(s) 211, 809
BseRI GAGGAG 1 cut(s) 415
BseSI GKGCMC 1 cut(s) 559
BseXI GCAGC 3 cut(s) 136, 493, 863
BshFI GGCC 3 cut(s) 137, 765, 861
BshNI GGYRCC 3 cut(s) 99, 209, 296
BsiSI CCGG 3 cut(s) 128, 213, 422
BslFI GGGAC 1 cut(s) 36
BslI CCNNNNNNNGG 6 cut(s) 362, 399, 484, 487, 1048, 1124
BsmAI GTCTC 3 cut(s) 72, 202, 435
BsmBI CGTCTC 1 cut(s) 435
BsmFI GGGAC 1 cut(s) 36
BsmI GAATGC 1 cut(s) 520
BsnI GGCC 3 cut(s) 137, 765, 861
Bso31I GGTCTC 1 cut(s) 202
Bsp1286I GDGCHC 2 cut(s) 559, 812
Bsp143I GATC 6 cut(s) 177, 574, 594, 601, 623, 724
BspACI CCGC 5 cut(s) 5, 122, 168, 621, 1183
BspANI GGCC 3 cut(s) 137, 765, 861
BspCNI CTCAG 3 cut(s) 31, 850, 1140
BspHI TCATGA 1 cut(s) 340
BspLI GGNNCC 7 cut(s) 24, 25, 101, 211, 298, 679, 1173
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 2 cut(s) 602, 631
BspT107I GGYRCC 3 cut(s) 99, 209, 296
BspTNI GGTCTC 1 cut(s) 202
BsrDI GCAATG 1 cut(s) 1159
BsrFI RCCGGY 1 cut(s) 127
BsrI ACTGG 2 cut(s) 211, 809
BssAI RCCGGY 1 cut(s) 127
BssECI CCNNGG 3 cut(s) 230, 760, 766
BssMI GATC 6 cut(s) 177, 574, 594, 601, 623, 724
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 2 cut(s) 760, 766
Bst2UI CCWGG 4 cut(s) 231, 357, 882, 1084
Bst4CI ACNGT 1 cut(s) 638
Bst6I CTCTTC 1 cut(s) 888
BstACI GRCGYC 1 cut(s) 210
BstC8I GCNNGC 4 cut(s) 84, 119, 129, 135
BstDEI CTNAG 5 cut(s) 18, 447, 460, 837, 1148
BstF5I GGATG 3 cut(s) 283, 430, 1006
BstH2I RGCGCY 2 cut(s) 134, 213
BstHHI GCGC 3 cut(s) 88, 133, 212
BstKTI GATC 6 cut(s) 180, 577, 597, 604, 626, 727
BstMAI GTCTC 3 cut(s) 72, 202, 435
BstMBI GATC 6 cut(s) 177, 574, 594, 601, 623, 724
BstMWI GCNNNNNNNGC 9 cut(s) 130, 287, 296, 434, 515, 524, 686, 790, 882
BstNI CCWGG 4 cut(s) 231, 357, 882, 1084
BstNSI RCATGY 2 cut(s) 227, 326
BstSCI CCNGG 5 cut(s) 212, 229, 355, 880, 1082
BstSLI GKGCMC 1 cut(s) 559
BstV1I GCAGC 3 cut(s) 136, 493, 863
BstV2I GAAGAC 1 cut(s) 1103
BstXI CCANNNNNNTGG 1 cut(s) 359
BsuRI GGCC 3 cut(s) 137, 765, 861
BtsCI GGATG 3 cut(s) 283, 430, 1006
BtsI GCAGTG 1 cut(s) 892
BtsIMutI CAGTG 2 cut(s) 204, 892
BveI ACCTGC 1 cut(s) 518
Cac8I GCNNGC 4 cut(s) 84, 119, 129, 135
CciI TCATGA 1 cut(s) 340
CfoI GCGC 3 cut(s) 88, 133, 212
Cfr10I RCCGGY 1 cut(s) 127
Cfr13I GGNCC 1 cut(s) 23
CseI GACGC 2 cut(s) 417, 465
CsiI ACCWGGT 2 cut(s) 355, 1082
Csp6I GTAC 4 cut(s) 142, 939, 961, 1129
CviAII CATG 9 cut(s) 224, 261, 323, 341, 434, 551, 560, 830, 983
CviQI GTAC 4 cut(s) 142, 939, 961, 1129
DdeI CTNAG 5 cut(s) 18, 447, 460, 837, 1148
DinI GGCGCC 1 cut(s) 211
DpnI GATC 6 cut(s) 179, 576, 596, 603, 625, 726
DpnII GATC 6 cut(s) 177, 574, 594, 601, 623, 724
DraIII CACNNNGTG 1 cut(s) 76
EaeI YGGCCR 2 cut(s) 135, 859
Eam1104I CTCTTC 1 cut(s) 888
EarI CTCTTC 1 cut(s) 888
EciI GGCGGA 2 cut(s) 20, 636
Eco130I CCWWGG 2 cut(s) 760, 766
Eco147I AGGCCT 1 cut(s) 765
Eco24I GRGCYC 1 cut(s) 812
Eco31I GGTCTC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 23
Eco57I CTGAAG 1 cut(s) 638
EcoO109I RGGNCCY 1 cut(s) 23
EcoRI GAATTC 2 cut(s) 411, 978
EcoRII CCWGG 4 cut(s) 229, 355, 880, 1082
EcoT14I CCWWGG 2 cut(s) 760, 766
EcoT38I GRGCYC 1 cut(s) 812
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 2 cut(s) 760, 766
Esp3I CGTCTC 1 cut(s) 435
FaeI CATG 9 cut(s) 227, 264, 326, 344, 437, 554, 563, 833, 986
FalI AAGNNNNNCTT 2 cut(s) 913, 945
FaqI GGGAC 1 cut(s) 36
FatI CATG 9 cut(s) 223, 260, 322, 340, 433, 550, 559, 829, 982
FauNDI CATATG 1 cut(s) 856
FbaI TGATCA 3 cut(s) 177, 574, 724
Fnu4HI GCNGC 5 cut(s) 122, 125, 169, 507, 852
FokI GGATG 3 cut(s) 290, 437, 1013
FriOI GRGCYC 1 cut(s) 812
Fsp4HI GCNGC 5 cut(s) 122, 125, 169, 507, 852
FspBI CTAG 5 cut(s) 453, 761, 951, 966, 996
GlaI GCGC 3 cut(s) 87, 132, 211
GluI GCNGC 5 cut(s) 122, 125, 169, 507, 852
HaeII RGCGCY 2 cut(s) 134, 213
HaeIII GGCC 3 cut(s) 137, 765, 861
HapII CCGG 3 cut(s) 128, 213, 422
HgaI GACGC 2 cut(s) 417, 465
HhaI GCGC 3 cut(s) 88, 133, 212
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 9 cut(s) 227, 264, 326, 344, 437, 554, 563, 833, 986
Hin6I GCGC 3 cut(s) 86, 131, 210
HinP1I GCGC 3 cut(s) 86, 131, 210
HincII GTYRAC 3 cut(s) 159, 314, 742
HindII GTYRAC 3 cut(s) 159, 314, 742
HindIII AAGCTT 2 cut(s) 791, 1064
HinfI GANTC 4 cut(s) 547, 708, 743, 869
HpaII CCGG 3 cut(s) 128, 213, 422
HphI GGTGA 4 cut(s) 172, 360, 705, 719
Hpy166II GTNNAC 8 cut(s) 159, 286, 314, 349, 368, 742, 963, 1131
Hpy188I TCNGA 5 cut(s) 177, 202, 707, 1149, 1190
Hpy188III TCNNGA 4 cut(s) 46, 341, 583, 1036
Hpy8I GTNNAC 8 cut(s) 159, 286, 314, 349, 368, 742, 963, 1131
HpyAV CCTTC 2 cut(s) 179, 262
HpyCH4III ACNGT 1 cut(s) 638
HpyCH4V TGCA 5 cut(s) 632, 642, 737, 1073, 1157
HpyF10VI GCNNNNNNNGC 9 cut(s) 130, 287, 296, 434, 515, 524, 686, 790, 882
HpyF3I CTNAG 5 cut(s) 18, 447, 460, 837, 1148
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 9 cut(s) 227, 264, 326, 344, 437, 554, 563, 833, 986
HspAI GCGC 3 cut(s) 86, 131, 210
KasI GGCGCC 1 cut(s) 209
KflI GGGWCCC 1 cut(s) 23
KroI GCCGGC 1 cut(s) 127
KroNI GCCGGC 1 cut(s) 129
Ksp22I TGATCA 3 cut(s) 177, 574, 724
Kzo9I GATC 6 cut(s) 177, 574, 594, 601, 623, 724
LmnI GCTCC 4 cut(s) 490, 677, 754, 970
Lsp1109I GCAGC 3 cut(s) 136, 493, 863
LweI GCATC 4 cut(s) 268, 415, 724, 991
MabI ACCWGGT 2 cut(s) 355, 1082
MaeI CTAG 5 cut(s) 453, 761, 951, 966, 996
MaeIII GTNAC 2 cut(s) 832, 845
MalI GATC 6 cut(s) 179, 576, 596, 603, 625, 726
MboI GATC 6 cut(s) 177, 574, 594, 601, 623, 724
MboII GAAGA 4 cut(s) 277, 369, 905, 1108
MhlI GDGCHC 2 cut(s) 559, 812
MlsI TGGCCA 1 cut(s) 861
MluCI AATT 5 cut(s) 411, 540, 578, 644, 978
MluNI TGGCCA 1 cut(s) 861
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 1 cut(s) 737
MmeI TCCRAC 2 cut(s) 225, 655
MnlI CCTC 9 cut(s) 90, 250, 393, 396, 488, 578, 889, 906, 1162
Mox20I TGGCCA 1 cut(s) 861
MroNI GCCGGC 1 cut(s) 127
MroXI GAANNNNTTC 1 cut(s) 1100
MscI TGGCCA 1 cut(s) 861
MseI TTAA 2 cut(s) 920, 1068
MslI CAYNNNNRTG 1 cut(s) 732
Msp20I TGGCCA 1 cut(s) 861
MspI CCGG 3 cut(s) 128, 213, 422
MspR9I CCNGG 5 cut(s) 214, 231, 357, 882, 1084
Mva1269I GAATGC 1 cut(s) 520
MvaI CCWGG 4 cut(s) 231, 357, 882, 1084
MwoI GCNNNNNNNGC 9 cut(s) 130, 287, 296, 434, 515, 524, 686, 790, 882
NaeI GCCGGC 1 cut(s) 129
NarI GGCGCC 1 cut(s) 210
NciI CCSGG 1 cut(s) 214
NdeI CATATG 1 cut(s) 856
NdeII GATC 6 cut(s) 177, 574, 594, 601, 623, 724
NgoMIV GCCGGC 1 cut(s) 127
NlaIII CATG 9 cut(s) 227, 264, 326, 344, 437, 554, 563, 833, 986
NlaIV GGNNCC 7 cut(s) 24, 25, 101, 211, 298, 679, 1173
NmeAIII GCCGAG 2 cut(s) 128, 163
NspI RCATGY 2 cut(s) 227, 326
PagI TCATGA 1 cut(s) 340
PceI AGGCCT 1 cut(s) 765
PciI ACATGT 1 cut(s) 223
PctI GAATGC 1 cut(s) 520
PdiI GCCGGC 1 cut(s) 129
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 3 cut(s) 547, 708, 869
PflMI CCANNNNNTGG 1 cut(s) 487
PkrI GCNGC 5 cut(s) 123, 126, 170, 508, 853
PleI GAGTC 1 cut(s) 737
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 1 cut(s) 737
PpuMI RGGWCCY 1 cut(s) 23
PscI ACATGT 1 cut(s) 223
Psp5II RGGWCCY 1 cut(s) 23
Psp6I CCWGG 4 cut(s) 229, 355, 880, 1082
PspGI CCWGG 4 cut(s) 229, 355, 880, 1082
PspN4I GGNNCC 7 cut(s) 24, 25, 101, 211, 298, 679, 1173
PspPI GGNCC 1 cut(s) 23
PspPPI RGGWCCY 1 cut(s) 23
RsaI GTAC 4 cut(s) 143, 940, 962, 1130
RsaNI GTAC 4 cut(s) 142, 939, 961, 1129
RseI CAYNNNNRTG 1 cut(s) 732
SaqAI TTAA 2 cut(s) 920, 1068
SatI GCNGC 5 cut(s) 122, 125, 169, 507, 852
Sau3AI GATC 6 cut(s) 177, 574, 594, 601, 623, 724
Sau96I GGNCC 1 cut(s) 23
ScaI AGTACT 1 cut(s) 143
SchI GAGTC 1 cut(s) 737
ScrFI CCNGG 5 cut(s) 214, 231, 357, 882, 1084
SduI GDGCHC 2 cut(s) 559, 812
SexAI ACCWGGT 2 cut(s) 355, 1082
SfaNI GCATC 4 cut(s) 268, 415, 724, 991
SfoI GGCGCC 1 cut(s) 211
SinI GGWCC 1 cut(s) 23
SmiMI CAYNNNNRTG 1 cut(s) 732
Sse9I AATT 5 cut(s) 411, 540, 578, 644, 978
SseBI AGGCCT 1 cut(s) 765
SsiI CCGC 5 cut(s) 5, 122, 168, 621, 1183
SspDI GGCGCC 1 cut(s) 209
SspMI CTAG 5 cut(s) 453, 761, 951, 966, 996
StuI AGGCCT 1 cut(s) 765
StyD4I CCNGG 5 cut(s) 212, 229, 355, 880, 1082
StyI CCWWGG 2 cut(s) 760, 766
TaaI ACNGT 1 cut(s) 638
TaqI TCGA 4 cut(s) 398, 499, 604, 1037
TasI AATT 5 cut(s) 411, 540, 578, 644, 978
TatI WGTACW 1 cut(s) 141
TauI GCSGC 2 cut(s) 124, 171
TfiI GAWTC 3 cut(s) 547, 708, 869
Tru1I TTAA 2 cut(s) 920, 1068
Tru9I TTAA 2 cut(s) 920, 1068
TscAI CASTG 2 cut(s) 211, 892
TseI GCWGC 3 cut(s) 124, 506, 851
TspDTI ATGAA 5 cut(s) 261, 357, 539, 906, 971
TspGWI ACGGA 1 cut(s) 30
TspRI CASTG 2 cut(s) 211, 892
Van91I CCANNNNNTGG 1 cut(s) 487
VpaK11BI GGWCC 1 cut(s) 23
XapI RAATTY 3 cut(s) 411, 644, 978
XceI RCATGY 2 cut(s) 227, 326
XcmI CCANNNNNNNNNTGG 1 cut(s) 869
XmaJI CCTAGG 1 cut(s) 760
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 5 cut(s) 453, 761, 951, 966, 996
ZrmI AGTACT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.