Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0000870

Physical Location & Seq

Genomic Coordinates Forward (+)

4991182 .. 4993415

Gene Structure 2234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g07130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGGCGGAGGCTTCGTCGCAGGGAGGGCACACCACTCTCTTTTCTCCGTACAAGATGGGGAAGTTCAATCTCTCTCACAGGGTGGTGCTGGCGCCGATGACGAGGTGCCGGGCGTTGAACGGAGTGCCGCAGCCGGCACTGGCCGAGTACTACGCTCAAAGATCAACCGCCGGCGGCTTTCTAATCAGTGAAGGCACTATCATCTCCGACACTGGGGCCGGATTTCCGCATGTTCCTGGGATTTACAACGACGAACAAGTGGAGGCATGGAAGAAGGTGGTGGACGCGGTTCATGCCAAAGGTGCCATTATTTTCTGTCAACTCTGGCACGTTGGCCGTTCATCTCATGAAGTTTATCAACCTGCCGGGGGAGCACCAATATCGTCAACCAACAATCCTGTTTCAAGGAGGTGGAGAATTCTGTTGCCGGATGGCTCTTATGGCTTTTACCCTAAGCCTCGAGCACTCGACACCCATGAAATTCCTCAAGTTGTTGAGCAATATCGCCAGGCTGCCTTGAATGCCATTCGTGCGGGTTTTGATGGAATTGAGATTCATGGGGCACATGGCTATCTCATTGACCAATTCTTGAAAGACGGGATCGATGATCGAACAGATGAGTATGGTGGATCGCTGGAAAACCGGTGCAAATTCTTGATTCAGATTGTTCAAGCAGTGGTTGGAGCAATAGGTGCTGATAGAGTTGGGGTTCGAATGTCACCAGCTATTGATCACATGGATGCTGTTGACTCTAATCCACTTATTCTAGGTCTGGCAGTGATCGAAAGGCTCAATAAGCTCCAACAAAACTGGGGCACAAGACTAACCTATCTTCATGTGACTCAGCCTCGCTACGCAGCCTATGGTCAAGCGGAAGCTGGAAAACCTGGTAGTGATGAAGAGGAAGCTGTGTTTATGAGGACTTTGAGGAAAACTTATCACGGTACATTTCTTGCTAGCGGAGGGTTTACTAGAGAGCTTGGAATGCAAGCTGTGGCTTCCGGGGATGCTGATTTGGTGTCCTACGGTCGCCTTTTTATTTCACACCCTGATTTGGTTCTGAGATTTAAGCTTAATGCACCCTTGACCAAGTATAACAGGAAGACTTTCTACACACAAGATCCTGTTGTTGGGTACACTGACTACCCTTTTCTGAACAAATCAAACGGGAAAGAGGAACCACTCTCCCGTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009620 GO:0009694 GO:0009695 GO:0009791 GO:0009908 GO:0009987 GO:0010035 GO:0010193 GO:0010817 GO:0016053 GO:0016491 GO:0016627 GO:0016628 GO:0016629 GO:0019752 GO:0022414 GO:0031407 GO:0031408 GO:0032501 GO:0032502 GO:0032787 GO:0042221 GO:0042445 GO:0042446 GO:0042493 GO:0042579 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046677 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0090567 GO:0099402 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

Oxidored_FMN

Protein Analysis

399

Amino Acids

43.87

Weight (kDa)

7.77

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_FMN	PF00724	13 - 360	1.4e-82	NADH:flavin oxidoreductase / NADH oxidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000870)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06050 AT2G06050 AT2G06050
fragaria_vesca	FvH4_1g08451 FvH4_1g08452 FvH4_1g08453 FvH4_1g08454 FvH4_1g08510 FvH4_1g08510 FvH4_1g08510 FvH4_1g08510
malus_domestica	MD00G1142600.v1.1 MD02G1089100.v1.1 MD12G1067300.v1.1 MD15G1216200.v1.1
prunus_persica	Prupe.7G200800_v2.0.a1
pyrus_communis	pycom02g07130 pycom15g19180
rosa_chinensis	RchiOBHm_Chr2g0094561 RchiOBHm_Chr2g0094611 RchiOBHm_Chr2g0094631 RchiOBHm_Chr2g0094641 RchiOBHm_Chr2g0150041 RchiOBHm_Chr7g0211621 RchiOBHm_Chr7g0230281
rosa_laevigata	RLG00000002990 RLG00000016504 RLG00000016506 RLG00000016507 RLG00000020462
rosa_multiflora	Rmu_co8133296.1_g000001 Rmu_co8390375.1_g000001 Rmu_sc0003760.1_g000017 Rmu_sc0004232.1_g000012 Rmu_sc0004359.1_g000033 Rmu_sc0004359.1_g000036 Rmu_sc0006422.1_g000001 Rmu_sc0009445.1_g000018 Rmu_sc0017068.1_g000001
rosa_roxburghii	Rroxscaffold_2G00097490 Rroxscaffold_2G00147030 Rroxscaffold_2G00147040 Rroxscaffold_2G00147050 Rroxscaffold_3G00247670
rosa_rugosa	Rorug02G0045400 Rorug02G0045400 Rorug02G0045600 Rorug02G0045700 Rorug02G0418000 Rorug07G0126300
rosa_samantha	Rh2AG093100 Rh2BG093400 Rh2BG093700 Rh2BG489500 Rh2CG095800 Rh2CG096000 Rh2DG092200 Rh2DG092400 Rh7AG259000 Rh7BG253300 Rh7CG276100 Rh7DG266600
rosa_wichuraiana	Rw0G003550 Rw0G003560 Rw2G038940 Rw7G022140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	370
AccB1I	GGYRCC	3 cut(s)	91, 105, 302
AccII	CGCG	1 cut(s)	287
AciI	CCGC	9 cut(s)	5, 128, 168, 174, 227, 287, 533, 872, 960
AclWI	GGATC	3 cut(s)	608, 637, 1115
AcoI	YGGCCR	2 cut(s)	141, 334
AcsI	RAATTY	3 cut(s)	417, 480, 650
AcyI	GRCGYC	1 cut(s)	92
AdeI	CACNNNGTG	1 cut(s)	82
AfaI	GTAC	4 cut(s)	50, 149, 946, 1136
AfiI	CCNNNNNNNGG	4 cut(s)	213, 368, 1054, 1130
AgeI	ACCGGT	1 cut(s)	642
AgsI	TTSAA	6 cut(s)	67, 118, 405, 520, 592, 671
AjnI	CCWGG	3 cut(s)	235, 507, 886
AluBI	AGCT	7 cut(s)	725, 799, 878, 908, 979, 992, 1072
AluI	AGCT	7 cut(s)	725, 799, 878, 908, 979, 992, 1072
Alw21I	GWGCWC	2 cut(s)	376, 466
AlwI	GGATC	3 cut(s)	608, 637, 1115
Ama87I	CYCGRG	1 cut(s)	459
AoxI	GGCC	3 cut(s)	141, 216, 334
ApeKI	GCWGC	3 cut(s)	130, 512, 857
ApoI	RAATTY	3 cut(s)	417, 480, 650
AsiGI	ACCGGT	1 cut(s)	642
Asp700I	GAANNNNTTC	1 cut(s)	1106
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	1 cut(s)	216
AsuC2I	CCSGG	3 cut(s)	110, 367, 1003
AsuHPI	GGTGA	1 cut(s)	711
AsuII	TTCGAA	1 cut(s)	712
AsuNHI	GCTAGC	1 cut(s)	956
AvaI	CYCGRG	1 cut(s)	459
BaeGI	GKGCMC	3 cut(s)	30, 565, 818
BanI	GGYRCC	3 cut(s)	91, 105, 302
BarI	GAAGNNNNNNTAC	2 cut(s)	1094, 1126
BbsI	GAAGAC	1 cut(s)	1109
Bbv12I	GWGCWC	2 cut(s)	376, 466
BbvI	GCAGC	3 cut(s)	142, 499, 869
BccI	CCATC	3 cut(s)	49, 425, 536
BceAI	ACGGC	1 cut(s)	321
BcgI	CGANNNNNNTGC	2 cut(s)	363, 397
BciT130I	CCWGG	3 cut(s)	237, 509, 888
BclI	TGATCA	1 cut(s)	730
BcnI	CCSGG	3 cut(s)	110, 367, 1003
BfaI	CTAG	3 cut(s)	767, 957, 972
BfoI	RGCGCY	1 cut(s)	95
BfuAI	ACCTGC	1 cut(s)	370
BisI	GCNGC	5 cut(s)	128, 131, 175, 513, 858
BlsI	GCNGC	5 cut(s)	129, 132, 176, 514, 859
BmcAI	AGTACT	1 cut(s)	149
Bme1390I	CCNGG	6 cut(s)	110, 237, 367, 509, 888, 1003
BmeT110I	CYCGRG	1 cut(s)	459
BmgT120I	GGNCC	1 cut(s)	216
BmiI	GGNNCC	5 cut(s)	93, 107, 217, 304, 1179
BmrFI	CCNGG	6 cut(s)	110, 237, 367, 509, 888, 1003
BmrI	ACTGGG	2 cut(s)	222, 820
BmsI	GCATC	2 cut(s)	730, 997
BmtI	GCTAGC	1 cut(s)	960
BmuI	ACTGGG	2 cut(s)	222, 820
BpiI	GAAGAC	1 cut(s)	1109
Bpu10I	CCTNAGC	1 cut(s)	453
Bpu14I	TTCGAA	1 cut(s)	712
BpuEI	CTTGAG	1 cut(s)	471
BpuMI	CCSGG	3 cut(s)	110, 367, 1003
Bsa29I	ATCGAT	1 cut(s)	603
BsaHI	GRCGYC	1 cut(s)	92
BsaJI	CCNNGG	3 cut(s)	236, 366, 1002
BsaWI	WCCGGW	1 cut(s)	642
BsaXI	ACNNNNNCTCC	1 cut(s)	29
Bsc4I	CCNNNNNNNGG	4 cut(s)	213, 368, 1054, 1130
Bse118I	RCCGGY	3 cut(s)	133, 170, 642
Bse1I	ACTGG	3 cut(s)	144, 217, 815
BseBI	CCWGG	3 cut(s)	237, 509, 888
BseCI	ATCGAT	1 cut(s)	603
BseDI	CCNNGG	3 cut(s)	236, 366, 1002
BseGI	GGATG	3 cut(s)	436, 745, 1012
BseLI	CCNNNNNNNGG	4 cut(s)	213, 368, 1054, 1130
BseMII	CTCAG	2 cut(s)	857, 1052
BseNI	ACTGG	3 cut(s)	144, 217, 815
BseSI	GKGCMC	3 cut(s)	30, 565, 818
BseXI	GCAGC	3 cut(s)	142, 499, 869
Bsh1236I	CGCG	1 cut(s)	287
Bsh1285I	CGRYCG	1 cut(s)	1030
BshFI	GGCC	3 cut(s)	143, 218, 336
BshNI	GGYRCC	3 cut(s)	91, 105, 302
BshTI	ACCGGT	1 cut(s)	642
BshVI	ATCGAT	1 cut(s)	603
BsiEI	CGRYCG	1 cut(s)	1030
BsiHKAI	GWGCWC	2 cut(s)	376, 466
BsiHKCI	CYCGRG	1 cut(s)	459
BsiSI	CCGG	8 cut(s)	109, 134, 171, 219, 366, 428, 643, 1002
BslI	CCNNNNNNNGG	4 cut(s)	213, 368, 1054, 1130
BsmI	GAATGC	2 cut(s)	526, 990
BsnI	GGCC	3 cut(s)	143, 218, 336
BsoBI	CYCGRG	1 cut(s)	459
Bsp119I	TTCGAA	1 cut(s)	712
Bsp1286I	GDGCHC	5 cut(s)	30, 376, 466, 565, 818
Bsp143I	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
BspACI	CCGC	9 cut(s)	5, 128, 168, 174, 227, 287, 533, 872, 960
BspANI	GGCC	3 cut(s)	143, 218, 336
BspCNI	CTCAG	2 cut(s)	856, 1053
BspDI	ATCGAT	1 cut(s)	603
BspFNI	CGCG	1 cut(s)	287
BspHI	TCATGA	1 cut(s)	346
BspLI	GGNNCC	5 cut(s)	93, 107, 217, 304, 1179
BspMI	ACCTGC	1 cut(s)	370
BspOI	GCTAGC	1 cut(s)	960
BspPI	GGATC	3 cut(s)	608, 637, 1115
BspT104I	TTCGAA	1 cut(s)	712
BspT107I	GGYRCC	3 cut(s)	91, 105, 302
BsrFI	RCCGGY	3 cut(s)	133, 170, 642
BsrI	ACTGG	3 cut(s)	144, 217, 815
BssAI	RCCGGY	3 cut(s)	133, 170, 642
BssECI	CCNNGG	3 cut(s)	236, 366, 1002
BssMI	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
BssNI	GRCGYC	1 cut(s)	92
Bst2UI	CCWGG	3 cut(s)	237, 509, 888
Bst4CI	ACNGT	2 cut(s)	944, 1028
Bst6I	CTCTTC	1 cut(s)	894
BstACI	GRCGYC	1 cut(s)	92
BstAPI	GCANNNNNTGC	1 cut(s)	692
BstBI	TTCGAA	1 cut(s)	712
BstC8I	GCNNGC	5 cut(s)	90, 135, 172, 958, 990
BstDEI	CTNAG	3 cut(s)	453, 843, 1061
BstF5I	GGATG	3 cut(s)	436, 745, 1012
BstFNI	CGCG	1 cut(s)	287
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	1 cut(s)	94
BstKTI	GATC	7 cut(s)	164, 603, 610, 632, 733, 783, 1123
BstMBI	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
BstMCI	CGRYCG	1 cut(s)	1030
BstNI	CCWGG	3 cut(s)	237, 509, 888
BstNSI	RCATGY	1 cut(s)	233
BstSCI	CCNGG	6 cut(s)	108, 235, 365, 507, 886, 1001
BstSLI	GKGCMC	3 cut(s)	30, 565, 818
BstUI	CGCG	1 cut(s)	287
BstV1I	GCAGC	3 cut(s)	142, 499, 869
BstV2I	GAAGAC	1 cut(s)	1109
BstX2I	RGATCY	1 cut(s)	1120
BstYI	RGATCY	1 cut(s)	1120
Bsu15I	ATCGAT	1 cut(s)	603
BsuRI	GGCC	3 cut(s)	143, 218, 336
BsuTUI	ATCGAT	1 cut(s)	603
BtsCI	GGATG	3 cut(s)	436, 745, 1012
BtsI	GCAGTG	2 cut(s)	681, 783
BtsIMutI	CAGTG	6 cut(s)	137, 193, 210, 681, 783, 1137
BveI	ACCTGC	1 cut(s)	370
Cac8I	GCNNGC	5 cut(s)	90, 135, 172, 958, 990
CciI	TCATGA	1 cut(s)	346
CfoI	GCGC	1 cut(s)	94
Cfr10I	RCCGGY	3 cut(s)	133, 170, 642
Cfr13I	GGNCC	1 cut(s)	216
ClaI	ATCGAT	1 cut(s)	603
CseI	GACGC	1 cut(s)	293
CsiI	ACCWGGT	1 cut(s)	886
Csp6I	GTAC	4 cut(s)	49, 148, 945, 1135
CspAI	ACCGGT	1 cut(s)	642
CviAII	CATG	9 cut(s)	230, 267, 293, 347, 476, 557, 566, 736, 836
CviQI	GTAC	4 cut(s)	49, 148, 945, 1135
DdeI	CTNAG	3 cut(s)	453, 843, 1061
DinI	GGCGCC	1 cut(s)	93
DpnI	GATC	7 cut(s)	163, 602, 609, 631, 732, 782, 1122
DpnII	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
DraIII	CACNNNGTG	1 cut(s)	82
EaeI	YGGCCR	2 cut(s)	141, 334
Eam1104I	CTCTTC	1 cut(s)	894
EarI	CTCTTC	1 cut(s)	894
EciI	GGCGGA	1 cut(s)	20
Eco88I	CYCGRG	1 cut(s)	459
EcoRI	GAATTC	1 cut(s)	417
EcoRII	CCWGG	3 cut(s)	235, 507, 886
EgeI	GGCGCC	1 cut(s)	93
EheI	GGCGCC	1 cut(s)	93
FaeI	CATG	9 cut(s)	233, 270, 296, 350, 479, 560, 569, 739, 839
FatI	CATG	9 cut(s)	229, 266, 292, 346, 475, 556, 565, 735, 835
FauI	CCCGC	1 cut(s)	526
FbaI	TGATCA	1 cut(s)	730
Fnu4HI	GCNGC	5 cut(s)	128, 131, 175, 513, 858
FokI	GGATG	3 cut(s)	443, 752, 1019
Fsp4HI	GCNGC	5 cut(s)	128, 131, 175, 513, 858
FspBI	CTAG	3 cut(s)	767, 957, 972
GlaI	GCGC	1 cut(s)	93
GluI	GCNGC	5 cut(s)	128, 131, 175, 513, 858
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	3 cut(s)	143, 218, 336
HapII	CCGG	8 cut(s)	109, 134, 171, 219, 366, 428, 643, 1002
HgaI	GACGC	1 cut(s)	293
HhaI	GCGC	1 cut(s)	94
Hin1I	GRCGYC	1 cut(s)	92
Hin1II	CATG	9 cut(s)	233, 270, 296, 350, 479, 560, 569, 739, 839
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HincII	GTYRAC	3 cut(s)	320, 387, 748
HindII	GTYRAC	3 cut(s)	320, 387, 748
HindIII	AAGCTT	1 cut(s)	1070
HinfI	GANTC	4 cut(s)	553, 658, 749, 841
HpaII	CCGG	8 cut(s)	109, 134, 171, 219, 366, 428, 643, 1002
HphI	GGTGA	1 cut(s)	711
Hpy166II	GTNNAC	6 cut(s)	283, 320, 387, 748, 969, 1137
Hpy188I	TCNGA	5 cut(s)	208, 663, 1062, 1155, 1196
Hpy188III	TCNNGA	3 cut(s)	347, 589, 655
Hpy8I	GTNNAC	6 cut(s)	283, 320, 387, 748, 969, 1137
Hpy99I	CGWCG	2 cut(s)	19, 254
HpyAV	CCTTC	2 cut(s)	185, 268
HpyCH4III	ACNGT	2 cut(s)	944, 1028
HpyCH4IV	ACGT	1 cut(s)	330
HpyCH4V	TGCA	3 cut(s)	648, 988, 1079
HpyF3I	CTNAG	3 cut(s)	453, 843, 1061
HpySE526I	ACGT	1 cut(s)	330
Hsp92I	GRCGYC	1 cut(s)	92
Hsp92II	CATG	9 cut(s)	233, 270, 296, 350, 479, 560, 569, 739, 839
HspAI	GCGC	1 cut(s)	92
KasI	GGCGCC	1 cut(s)	91
KroI	GCCGGC	2 cut(s)	133, 170
KroNI	GCCGGC	2 cut(s)	135, 172
Ksp22I	TGATCA	1 cut(s)	730
Kzo9I	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
LmnI	GCTCC	3 cut(s)	371, 683, 804
Lsp1109I	GCAGC	3 cut(s)	142, 499, 869
LweI	GCATC	2 cut(s)	730, 997
MabI	ACCWGGT	1 cut(s)	886
MaeI	CTAG	3 cut(s)	767, 957, 972
MaeII	ACGT	1 cut(s)	330
MaeIII	GTNAC	2 cut(s)	717, 838
MalI	GATC	7 cut(s)	163, 602, 609, 631, 732, 782, 1122
MboI	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
MboII	GAAGA	4 cut(s)	283, 824, 911, 1114
MflI	RGATCY	1 cut(s)	1120
MhlI	GDGCHC	5 cut(s)	30, 376, 466, 565, 818
MluCI	AATT	5 cut(s)	417, 480, 546, 584, 650
Mly113I	GGCGCC	1 cut(s)	92
MlyI	GAGTC	2 cut(s)	743, 835
MmeI	TCCRAC	3 cut(s)	231, 661, 826
MreI	CGCCGGCG	1 cut(s)	170
MroNI	GCCGGC	2 cut(s)	133, 170
MroXI	GAANNNNTTC	1 cut(s)	1106
MseI	TTAA	2 cut(s)	1068, 1074
MslI	CAYNNNNRTG	1 cut(s)	738
MspI	CCGG	8 cut(s)	109, 134, 171, 219, 366, 428, 643, 1002
MspR9I	CCNGG	6 cut(s)	110, 237, 367, 509, 888, 1003
Mva1269I	GAATGC	2 cut(s)	526, 990
MvaI	CCWGG	3 cut(s)	237, 509, 888
MvnI	CGCG	1 cut(s)	287
NaeI	GCCGGC	2 cut(s)	135, 172
NarI	GGCGCC	1 cut(s)	92
NciI	CCSGG	3 cut(s)	110, 367, 1003
NdeII	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
NgoMIV	GCCGGC	2 cut(s)	133, 170
NheI	GCTAGC	1 cut(s)	956
NlaIII	CATG	9 cut(s)	233, 270, 296, 350, 479, 560, 569, 739, 839
NlaIV	GGNNCC	5 cut(s)	93, 107, 217, 304, 1179
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	2 cut(s)	717, 838
NspI	RCATGY	1 cut(s)	233
NspV	TTCGAA	1 cut(s)	712
PaeR7I	CTCGAG	1 cut(s)	459
PagI	TCATGA	1 cut(s)	346
PctI	GAATGC	2 cut(s)	526, 990
PdiI	GCCGGC	2 cut(s)	135, 172
PdmI	GAANNNNTTC	1 cut(s)	1106
PfeI	GAWTC	2 cut(s)	553, 658
PinAI	ACCGGT	1 cut(s)	642
PkrI	GCNGC	5 cut(s)	129, 132, 176, 514, 859
PleI	GAGTC	2 cut(s)	743, 835
PluTI	GGCGCC	1 cut(s)	95
PpsI	GAGTC	2 cut(s)	743, 835
Psp6I	CCWGG	3 cut(s)	235, 507, 886
PspGI	CCWGG	3 cut(s)	235, 507, 886
PspN4I	GGNNCC	5 cut(s)	93, 107, 217, 304, 1179
PspPI	GGNCC	1 cut(s)	216
PspXI	VCTCGAGB	1 cut(s)	459
PsuI	RGATCY	1 cut(s)	1120
RsaI	GTAC	4 cut(s)	50, 149, 946, 1136
RsaNI	GTAC	4 cut(s)	49, 148, 945, 1135
RseI	CAYNNNNRTG	1 cut(s)	738
SaqAI	TTAA	2 cut(s)	1068, 1074
SatI	GCNGC	5 cut(s)	128, 131, 175, 513, 858
Sau3AI	GATC	7 cut(s)	161, 600, 607, 629, 730, 780, 1120
Sau96I	GGNCC	1 cut(s)	216
ScaI	AGTACT	1 cut(s)	149
SchI	GAGTC	2 cut(s)	743, 835
ScrFI	CCNGG	6 cut(s)	110, 237, 367, 509, 888, 1003
SduI	GDGCHC	5 cut(s)	30, 376, 466, 565, 818
SexAI	ACCWGGT	1 cut(s)	886
SfaNI	GCATC	2 cut(s)	730, 997
SfoI	GGCGCC	1 cut(s)	93
Sfr274I	CTCGAG	1 cut(s)	459
SfuI	TTCGAA	1 cut(s)	712
SgrAI	CRCCGGYG	1 cut(s)	170
SlaI	CTCGAG	1 cut(s)	459
SmiMI	CAYNNNNRTG	1 cut(s)	738
SmlI	CTYRAG	2 cut(s)	459, 486
SmoI	CTYRAG	2 cut(s)	459, 486
Sse9I	AATT	5 cut(s)	417, 480, 546, 584, 650
SsiI	CCGC	9 cut(s)	5, 128, 168, 174, 227, 287, 533, 872, 960
SspDI	GGCGCC	1 cut(s)	91
SspMI	CTAG	3 cut(s)	767, 957, 972
StyD4I	CCNGG	6 cut(s)	108, 235, 365, 507, 886, 1001
TaaI	ACNGT	2 cut(s)	944, 1028
TaiI	ACGT	1 cut(s)	333
TaqI	TCGA	6 cut(s)	460, 468, 603, 610, 712, 783
TasI	AATT	5 cut(s)	417, 480, 546, 584, 650
TatI	WGTACW	1 cut(s)	147
TauI	GCSGC	2 cut(s)	130, 177
TfiI	GAWTC	2 cut(s)	553, 658
Tru1I	TTAA	2 cut(s)	1068, 1074
Tru9I	TTAA	2 cut(s)	1068, 1074
TscAI	CASTG	6 cut(s)	144, 193, 217, 681, 783, 1144
TseFI	GTSAC	2 cut(s)	717, 838
TseI	GCWGC	3 cut(s)	130, 512, 857
Tsp45I	GTSAC	2 cut(s)	717, 838
TspDTI	ATGAA	7 cut(s)	281, 330, 363, 492, 545, 824, 912
TspGWI	ACGGA	2 cut(s)	36, 135
TspRI	CASTG	6 cut(s)	144, 193, 217, 681, 783, 1144
XapI	RAATTY	3 cut(s)	417, 480, 650
XceI	RCATGY	1 cut(s)	233
XhoI	CTCGAG	1 cut(s)	459
XmnI	GAANNNNTTC	1 cut(s)	1106
XspI	CTAG	3 cut(s)	767, 957, 972
ZrmI	AGTACT	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.