12-oxophytodienoate reductase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Oxidored_FMN | PF00724 | 11 - 354 | 2.6e-69 | NADH:flavin oxidoreductase / NADH oxidase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 296 |
| AciI | CCGC | 2 cut(s) | 168, 537 |
| AclWI | GGATC | 2 cut(s) | 524, 587 |
| AcoI | YGGCCR | 2 cut(s) | 858, 1003 |
| AcsI | RAATTY | 4 cut(s) | 117, 411, 629, 1009 |
| AcuI | CTGAAG | 1 cut(s) | 204 |
| AcvI | CACGTG | 1 cut(s) | 224 |
| AcyI | GRCGYC | 1 cut(s) | 457 |
| AdeI | CACNNNGTG | 1 cut(s) | 76 |
| AfaI | GTAC | 2 cut(s) | 922, 1112 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 362, 1030, 1106, 1129 |
| AflIII | ACRYGT | 1 cut(s) | 223 |
| AgsI | TTSAA | 8 cut(s) | 287, 381, 399, 650, 662, 715, 782, 1063 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 99 |
| AjnI | CCWGG | 1 cut(s) | 229 |
| AluBI | AGCT | 6 cut(s) | 107, 769, 778, 802, 911, 1048 |
| AluI | AGCT | 6 cut(s) | 107, 769, 778, 802, 911, 1048 |
| Alw21I | GWGCWC | 1 cut(s) | 109 |
| Alw26I | GTCTC | 3 cut(s) | 431, 435, 1073 |
| AlwI | GGATC | 2 cut(s) | 524, 587 |
| AoxI | GGCC | 5 cut(s) | 169, 742, 748, 858, 1003 |
| ApeKI | GCWGC | 1 cut(s) | 506 |
| ApoI | RAATTY | 4 cut(s) | 117, 411, 629, 1009 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 672, 704 |
| AspA2I | CCTAGG | 1 cut(s) | 745 |
| AspLEI | GCGC | 2 cut(s) | 88, 549 |
| AsuC2I | CCSGG | 1 cut(s) | 165 |
| AsuHPI | GGTGA | 2 cut(s) | 19, 690 |
| AvrII | CCTAGG | 1 cut(s) | 745 |
| BanI | GGYRCC | 1 cut(s) | 296 |
| BanII | GRGCYC | 1 cut(s) | 109 |
| BauI | CACGAG | 1 cut(s) | 205 |
| BbrPI | CACGTG | 1 cut(s) | 224 |
| Bbv12I | GWGCWC | 1 cut(s) | 109 |
| BbvI | GCAGC | 1 cut(s) | 493 |
| BccI | CCATC | 4 cut(s) | 43, 399, 419, 569 |
| BceAI | ACGGC | 2 cut(s) | 560, 671 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 191, 225, 311, 345 |
| BciT130I | CCWGG | 1 cut(s) | 231 |
| BclI | TGATCA | 2 cut(s) | 559, 868 |
| BcnI | CCSGG | 1 cut(s) | 165 |
| BcoDI | GTCTC | 3 cut(s) | 431, 435, 1073 |
| BfaI | CTAG | 4 cut(s) | 357, 746, 933, 956 |
| BfmI | CTRYAG | 1 cut(s) | 1101 |
| BfoI | RGCGCY | 1 cut(s) | 550 |
| BisI | GCNGC | 3 cut(s) | 169, 507, 538 |
| BlnI | CCTAGG | 1 cut(s) | 745 |
| BlpI | GCTNAGC | 1 cut(s) | 447 |
| BlsI | GCNGC | 3 cut(s) | 170, 508, 539 |
| Bme1390I | CCNGG | 2 cut(s) | 165, 231 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 99 |
| BmiI | GGNNCC | 1 cut(s) | 298 |
| BmrFI | CCNGG | 2 cut(s) | 165, 231 |
| BmsI | GCATC | 3 cut(s) | 709, 871, 973 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 447 |
| BpuEI | CTTGAG | 1 cut(s) | 417 |
| BpuMI | CCSGG | 1 cut(s) | 165 |
| BsaAI | YACGTR | 1 cut(s) | 224 |
| BsaHI | GRCGYC | 1 cut(s) | 457 |
| BsaI | GGTCTC | 1 cut(s) | 435 |
| BsaJI | CCNNGG | 4 cut(s) | 163, 230, 745, 969 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 362, 1030, 1106, 1129 |
| Bse118I | RCCGGY | 1 cut(s) | 700 |
| BseBI | CCWGG | 1 cut(s) | 231 |
| BseDI | CCNNGG | 4 cut(s) | 163, 230, 745, 969 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 362, 1030, 1106, 1129 |
| BseMII | CTCAG | 4 cut(s) | 164, 461, 494, 836 |
| BseXI | GCAGC | 1 cut(s) | 493 |
| BseYI | CCCAGC | 1 cut(s) | 212 |
| Bsh1285I | CGRYCG | 1 cut(s) | 589 |
| BshFI | GGCC | 5 cut(s) | 171, 744, 750, 860, 1005 |
| BshNI | GGYRCC | 1 cut(s) | 296 |
| BsiEI | CGRYCG | 1 cut(s) | 589 |
| BsiHKAI | GWGCWC | 1 cut(s) | 109 |
| BsiSI | CCGG | 3 cut(s) | 165, 701, 1006 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 362, 1030, 1106, 1129 |
| BsmAI | GTCTC | 3 cut(s) | 431, 435, 1073 |
| BsmI | GAATGC | 1 cut(s) | 1057 |
| BsnI | GGCC | 5 cut(s) | 171, 744, 750, 860, 1005 |
| Bso31I | GGTCTC | 1 cut(s) | 435 |
| Bsp1286I | GDGCHC | 1 cut(s) | 109 |
| Bsp143I | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 447 |
| BspACI | CCGC | 2 cut(s) | 168, 537 |
| BspANI | GGCC | 5 cut(s) | 171, 744, 750, 860, 1005 |
| BspCNI | CTCAG | 4 cut(s) | 163, 460, 493, 835 |
| BspHI | TCATGA | 1 cut(s) | 891 |
| BspLI | GGNNCC | 1 cut(s) | 298 |
| BspPI | GGATC | 2 cut(s) | 524, 587 |
| BspT107I | GGYRCC | 1 cut(s) | 296 |
| BspTNI | GGTCTC | 1 cut(s) | 435 |
| BsrFI | RCCGGY | 1 cut(s) | 700 |
| BssAI | RCCGGY | 1 cut(s) | 700 |
| BssECI | CCNNGG | 4 cut(s) | 163, 230, 745, 969 |
| BssMI | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| BssNI | GRCGYC | 1 cut(s) | 457 |
| BssSI | CACGAG | 1 cut(s) | 205 |
| BssT1I | CCWWGG | 1 cut(s) | 745 |
| Bst2BI | CACGAG | 1 cut(s) | 205 |
| Bst2UI | CCWGG | 1 cut(s) | 231 |
| Bst4CI | ACNGT | 2 cut(s) | 623, 970 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstACI | GRCGYC | 1 cut(s) | 457 |
| BstBAI | YACGTR | 1 cut(s) | 224 |
| BstC8I | GCNNGC | 5 cut(s) | 56, 84, 129, 615, 804 |
| BstDEI | CTNAG | 5 cut(s) | 150, 447, 480, 822, 1155 |
| BstDSI | CCRYGG | 1 cut(s) | 969 |
| BstH2I | RGCGCY | 1 cut(s) | 550 |
| BstHHI | GCGC | 2 cut(s) | 88, 549 |
| BstKTI | GATC | 6 cut(s) | 138, 532, 562, 582, 589, 871 |
| BstMAI | GTCTC | 3 cut(s) | 431, 435, 1073 |
| BstMBI | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| BstMCI | CGRYCG | 1 cut(s) | 589 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 287, 296, 515, 524, 546, 671, 775 |
| BstNI | CCWGG | 1 cut(s) | 231 |
| BstNSI | RCATGY | 1 cut(s) | 326 |
| BstSCI | CCNGG | 2 cut(s) | 163, 229 |
| BstSFI | CTRYAG | 1 cut(s) | 1101 |
| BstV1I | GCAGC | 1 cut(s) | 493 |
| BstX2I | RGATCY | 1 cut(s) | 529 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 359 |
| BstYI | RGATCY | 1 cut(s) | 529 |
| BsuRI | GGCC | 5 cut(s) | 171, 744, 750, 860, 1005 |
| BtgI | CCRYGG | 1 cut(s) | 969 |
| BtgZI | GCGATG | 2 cut(s) | 146, 996 |
| BtsIMutI | CAGTG | 1 cut(s) | 762 |
| Cac8I | GCNNGC | 5 cut(s) | 56, 84, 129, 615, 804 |
| CciI | TCATGA | 1 cut(s) | 891 |
| CfoI | GCGC | 2 cut(s) | 88, 549 |
| Cfr10I | RCCGGY | 1 cut(s) | 700 |
| CseI | GACGC | 2 cut(s) | 287, 465 |
| Csp6I | GTAC | 2 cut(s) | 921, 1111 |
| CviAII | CATG | 6 cut(s) | 323, 470, 534, 815, 892, 928 |
| CviQI | GTAC | 2 cut(s) | 921, 1111 |
| DdeI | CTNAG | 5 cut(s) | 150, 447, 480, 822, 1155 |
| DpnI | GATC | 6 cut(s) | 137, 531, 561, 581, 588, 870 |
| DpnII | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| DraIII | CACNNNGTG | 1 cut(s) | 76 |
| DriI | GACNNNNNGTC | 1 cut(s) | 99 |
| EaeI | YGGCCR | 2 cut(s) | 858, 1003 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 99 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Ecl136II | GAGCTC | 1 cut(s) | 107 |
| Eco130I | CCWWGG | 1 cut(s) | 745 |
| Eco147I | AGGCCT | 1 cut(s) | 750 |
| Eco24I | GRGCYC | 1 cut(s) | 109 |
| Eco31I | GGTCTC | 1 cut(s) | 435 |
| Eco53kI | GAGCTC | 1 cut(s) | 107 |
| Eco57I | CTGAAG | 1 cut(s) | 204 |
| Eco72I | CACGTG | 1 cut(s) | 224 |
| EcoICRI | GAGCTC | 1 cut(s) | 107 |
| EcoRII | CCWGG | 1 cut(s) | 229 |
| EcoT14I | CCWWGG | 1 cut(s) | 745 |
| EcoT38I | GRGCYC | 1 cut(s) | 109 |
| ErhI | CCWWGG | 1 cut(s) | 745 |
| FaeI | CATG | 6 cut(s) | 326, 473, 537, 818, 895, 931 |
| FatI | CATG | 6 cut(s) | 322, 469, 533, 814, 891, 927 |
| FauNDI | CATATG | 1 cut(s) | 1000 |
| FbaI | TGATCA | 2 cut(s) | 559, 868 |
| Fnu4HI | GCNGC | 3 cut(s) | 169, 507, 538 |
| FriOI | GRGCYC | 1 cut(s) | 109 |
| Fsp4HI | GCNGC | 3 cut(s) | 169, 507, 538 |
| FspBI | CTAG | 4 cut(s) | 357, 746, 933, 956 |
| GlaI | GCGC | 2 cut(s) | 87, 548 |
| GluI | GCNGC | 3 cut(s) | 169, 507, 538 |
| GsaI | CCCAGC | 1 cut(s) | 216 |
| HaeII | RGCGCY | 1 cut(s) | 550 |
| HaeIII | GGCC | 5 cut(s) | 171, 744, 750, 860, 1005 |
| HapII | CCGG | 3 cut(s) | 165, 701, 1006 |
| HgaI | GACGC | 2 cut(s) | 287, 465 |
| HhaI | GCGC | 2 cut(s) | 88, 549 |
| Hin1I | GRCGYC | 1 cut(s) | 457 |
| Hin1II | CATG | 6 cut(s) | 326, 473, 537, 818, 895, 931 |
| Hin6I | GCGC | 2 cut(s) | 86, 547 |
| HinP1I | GCGC | 2 cut(s) | 86, 547 |
| HincII | GTYRAC | 2 cut(s) | 159, 314 |
| HindII | GTYRAC | 2 cut(s) | 159, 314 |
| HindIII | AAGCTT | 1 cut(s) | 909 |
| HinfI | GANTC | 5 cut(s) | 24, 637, 693, 728, 863 |
| HpaII | CCGG | 3 cut(s) | 165, 701, 1006 |
| HphI | GGTGA | 2 cut(s) | 19, 690 |
| Hpy166II | GTNNAC | 6 cut(s) | 159, 277, 314, 349, 945, 1113 |
| Hpy188I | TCNGA | 7 cut(s) | 153, 202, 483, 642, 692, 733, 868 |
| Hpy188III | TCNNGA | 6 cut(s) | 21, 434, 634, 872, 892, 1130 |
| Hpy8I | GTNNAC | 6 cut(s) | 159, 277, 314, 349, 945, 1113 |
| Hpy99I | CGWCG | 1 cut(s) | 459 |
| HpyAV | CCTTC | 2 cut(s) | 182, 262 |
| HpyCH4III | ACNGT | 2 cut(s) | 623, 970 |
| HpyCH4IV | ACGT | 2 cut(s) | 223, 789 |
| HpyCH4V | TGCA | 3 cut(s) | 322, 617, 627 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 287, 296, 515, 524, 546, 671, 775 |
| HpyF3I | CTNAG | 5 cut(s) | 150, 447, 480, 822, 1155 |
| HpySE526I | ACGT | 2 cut(s) | 223, 789 |
| Hsp92I | GRCGYC | 1 cut(s) | 457 |
| Hsp92II | CATG | 6 cut(s) | 326, 473, 537, 818, 895, 931 |
| HspAI | GCGC | 2 cut(s) | 86, 547 |
| Ksp22I | TGATCA | 2 cut(s) | 559, 868 |
| Kzo9I | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| LmnI | GCTCC | 2 cut(s) | 112, 1060 |
| Lsp1109I | GCAGC | 1 cut(s) | 493 |
| LweI | GCATC | 3 cut(s) | 709, 871, 973 |
| MaeI | CTAG | 4 cut(s) | 357, 746, 933, 956 |
| MaeII | ACGT | 2 cut(s) | 223, 789 |
| MaeIII | GTNAC | 1 cut(s) | 817 |
| MalI | GATC | 6 cut(s) | 137, 531, 561, 581, 588, 870 |
| MboI | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| MboII | GAAGA | 3 cut(s) | 30, 277, 369 |
| MflI | RGATCY | 1 cut(s) | 529 |
| MhlI | GDGCHC | 1 cut(s) | 109 |
| MluCI | AATT | 6 cut(s) | 117, 411, 563, 629, 887, 1009 |
| MlyI | GAGTC | 3 cut(s) | 18, 722, 872 |
| MmeI | TCCRAC | 2 cut(s) | 225, 756 |
| MseI | TTAA | 3 cut(s) | 255, 512, 1044 |
| MspI | CCGG | 3 cut(s) | 165, 701, 1006 |
| MspR9I | CCNGG | 2 cut(s) | 165, 231 |
| Mva1269I | GAATGC | 1 cut(s) | 1057 |
| MvaI | CCWGG | 1 cut(s) | 231 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 287, 296, 515, 524, 546, 671, 775 |
| NciI | CCSGG | 1 cut(s) | 165 |
| NdeI | CATATG | 1 cut(s) | 1000 |
| NdeII | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| NlaIII | CATG | 6 cut(s) | 326, 473, 537, 818, 895, 931 |
| NlaIV | GGNNCC | 1 cut(s) | 298 |
| NmeAIII | GCCGAG | 1 cut(s) | 886 |
| NspI | RCATGY | 1 cut(s) | 326 |
| PagI | TCATGA | 1 cut(s) | 891 |
| PceI | AGGCCT | 1 cut(s) | 750 |
| PctI | GAATGC | 1 cut(s) | 1057 |
| PfeI | GAWTC | 2 cut(s) | 637, 693 |
| PkrI | GCNGC | 3 cut(s) | 170, 508, 539 |
| Ple19I | CGATCG | 1 cut(s) | 589 |
| PleI | GAGTC | 3 cut(s) | 18, 722, 871 |
| PmaCI | CACGTG | 1 cut(s) | 224 |
| PmlI | CACGTG | 1 cut(s) | 224 |
| PpsI | GAGTC | 3 cut(s) | 18, 722, 871 |
| Ppu21I | YACGTR | 1 cut(s) | 224 |
| Psp124BI | GAGCTC | 1 cut(s) | 109 |
| Psp6I | CCWGG | 1 cut(s) | 229 |
| PspCI | CACGTG | 1 cut(s) | 224 |
| PspFI | CCCAGC | 1 cut(s) | 212 |
| PspGI | CCWGG | 1 cut(s) | 229 |
| PspN4I | GGNNCC | 1 cut(s) | 298 |
| PsuI | RGATCY | 1 cut(s) | 529 |
| PvuI | CGATCG | 1 cut(s) | 589 |
| RsaI | GTAC | 2 cut(s) | 922, 1112 |
| RsaNI | GTAC | 2 cut(s) | 921, 1111 |
| SacI | GAGCTC | 1 cut(s) | 109 |
| SaqAI | TTAA | 3 cut(s) | 255, 512, 1044 |
| SatI | GCNGC | 3 cut(s) | 169, 507, 538 |
| Sau3AI | GATC | 6 cut(s) | 135, 529, 559, 579, 586, 868 |
| SchI | GAGTC | 3 cut(s) | 18, 722, 872 |
| ScrFI | CCNGG | 2 cut(s) | 165, 231 |
| SduI | GDGCHC | 1 cut(s) | 109 |
| SfaNI | GCATC | 3 cut(s) | 709, 871, 973 |
| SfcI | CTRYAG | 1 cut(s) | 1101 |
| SmlI | CTYRAG | 1 cut(s) | 432 |
| SmoI | CTYRAG | 1 cut(s) | 432 |
| Sse9I | AATT | 6 cut(s) | 117, 411, 563, 629, 887, 1009 |
| SseBI | AGGCCT | 1 cut(s) | 750 |
| SsiI | CCGC | 2 cut(s) | 168, 537 |
| SspMI | CTAG | 4 cut(s) | 357, 746, 933, 956 |
| SstI | GAGCTC | 1 cut(s) | 109 |
| StuI | AGGCCT | 1 cut(s) | 750 |
| StyD4I | CCNGG | 2 cut(s) | 163, 229 |
| StyI | CCWWGG | 1 cut(s) | 745 |
| TaaI | ACNGT | 2 cut(s) | 623, 970 |
| TaiI | ACGT | 2 cut(s) | 226, 792 |
| TaqI | TCGA | 5 cut(s) | 103, 138, 462, 523, 589 |
| TasI | AATT | 6 cut(s) | 117, 411, 563, 629, 887, 1009 |
| TauI | GCSGC | 2 cut(s) | 171, 540 |
| TfiI | GAWTC | 2 cut(s) | 637, 693 |
| Tru1I | TTAA | 3 cut(s) | 255, 512, 1044 |
| Tru9I | TTAA | 3 cut(s) | 255, 512, 1044 |
| TscAI | CASTG | 1 cut(s) | 762 |
| TseI | GCWGC | 1 cut(s) | 506 |
| TspDTI | ATGAA | 5 cut(s) | 261, 486, 612, 880, 916 |
| TspGWI | ACGGA | 2 cut(s) | 740, 864 |
| TspRI | CASTG | 1 cut(s) | 762 |
| XapI | RAATTY | 4 cut(s) | 117, 411, 629, 1009 |
| XceI | RCATGY | 1 cut(s) | 326 |
| XmaJI | CCTAGG | 1 cut(s) | 745 |
| XspI | CTAG | 4 cut(s) | 357, 746, 933, 956 |