Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1360 |
| AccB1I | GGYRCC | 2 cut(s) | 961, 1166 |
| AccI | GTMKAC | 2 cut(s) | 311, 915 |
| AccII | CGCG | 2 cut(s) | 482, 647 |
| AciI | CCGC | 1 cut(s) | 150 |
| AclWI | GGATC | 1 cut(s) | 761 |
| AcsI | RAATTY | 3 cut(s) | 1017, 1094, 1325 |
| AcyI | GRCGYC | 1 cut(s) | 962 |
| AdeI | CACNNNGTG | 1 cut(s) | 1270 |
| AfaI | GTAC | 4 cut(s) | 10, 371, 810, 1013 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 122, 925, 1176 |
| AhlI | ACTAGT | 1 cut(s) | 970 |
| AjnI | CCWGG | 2 cut(s) | 97, 1186 |
| AleI | CACNNNNGTG | 2 cut(s) | 233, 1034 |
| AluBI | AGCT | 4 cut(s) | 182, 325, 1122, 1210 |
| AluI | AGCT | 4 cut(s) | 182, 325, 1122, 1210 |
| Alw26I | GTCTC | 2 cut(s) | 244, 611 |
| AlwI | GGATC | 1 cut(s) | 761 |
| AoxI | GGCC | 4 cut(s) | 299, 303, 624, 691 |
| ApaI | GGGCCC | 1 cut(s) | 628 |
| ApeKI | GCWGC | 4 cut(s) | 91, 112, 182, 1301 |
| ApoI | RAATTY | 3 cut(s) | 1017, 1094, 1325 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1094 |
| AspA2I | CCTAGG | 1 cut(s) | 104 |
| AspLEI | GCGC | 5 cut(s) | 177, 484, 647, 964, 1225 |
| AspS9I | GGNCC | 4 cut(s) | 101, 494, 624, 625 |
| AsuC2I | CCSGG | 1 cut(s) | 1171 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 41, 866, 1282 |
| AsuNHI | GCTAGC | 1 cut(s) | 1225 |
| AvaII | GGWCC | 2 cut(s) | 101, 494 |
| AvrII | CCTAGG | 1 cut(s) | 104 |
| BaeGI | GKGCMC | 1 cut(s) | 628 |
| BanI | GGYRCC | 2 cut(s) | 961, 1166 |
| BanII | GRGCYC | 1 cut(s) | 628 |
| BbsI | GAAGAC | 1 cut(s) | 1287 |
| BbvI | GCAGC | 4 cut(s) | 78, 99, 169, 1288 |
| BccI | CCATC | 2 cut(s) | 168, 568 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1004, 1038 |
| BciT130I | CCWGG | 2 cut(s) | 99, 1188 |
| BciVI | GTATCC | 1 cut(s) | 235 |
| BclI | TGATCA | 1 cut(s) | 697 |
| BcnI | CCSGG | 1 cut(s) | 1171 |
| BcoDI | GTCTC | 2 cut(s) | 244, 611 |
| BcuI | ACTAGT | 1 cut(s) | 970 |
| BfaI | CTAG | 7 cut(s) | 105, 179, 215, 233, 470, 971, 1226 |
| BfoI | RGCGCY | 2 cut(s) | 178, 965 |
| BfuAI | ACCTGC | 1 cut(s) | 1360 |
| BfuI | GTATCC | 1 cut(s) | 235 |
| BglII | AGATCT | 3 cut(s) | 196, 264, 796 |
| BisI | GCNGC | 5 cut(s) | 92, 113, 151, 183, 1302 |
| BlnI | CCTAGG | 1 cut(s) | 104 |
| BlsI | GCNGC | 5 cut(s) | 93, 114, 152, 184, 1303 |
| BmcAI | AGTACT | 2 cut(s) | 10, 371 |
| Bme1390I | CCNGG | 3 cut(s) | 99, 1171, 1188 |
| Bme18I | GGWCC | 2 cut(s) | 101, 494 |
| BmgT120I | GGNCC | 4 cut(s) | 101, 494, 624, 625 |
| BmiI | GGNNCC | 4 cut(s) | 495, 626, 963, 1168 |
| BmrFI | CCNGG | 3 cut(s) | 99, 1171, 1188 |
| BmrI | ACTGGG | 1 cut(s) | 1261 |
| BmtI | GCTAGC | 1 cut(s) | 1229 |
| BmuI | ACTGGG | 1 cut(s) | 1261 |
| BpiI | GAAGAC | 1 cut(s) | 1287 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 100, 132 |
| BpmI | CTGGAG | 1 cut(s) | 394 |
| BpuEI | CTTGAG | 3 cut(s) | 40, 63, 191 |
| BpuMI | CCSGG | 1 cut(s) | 1171 |
| BsaBI | GATNNNNATC | 1 cut(s) | 395 |
| BsaHI | GRCGYC | 1 cut(s) | 962 |
| BsaI | GGTCTC | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 2 cut(s) | 104, 662 |
| BsaWI | WCCGGW | 1 cut(s) | 496 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 125, 155, 1168, 1198 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 122, 925, 1176 |
| Bse118I | RCCGGY | 2 cut(s) | 301, 958 |
| Bse1I | ACTGG | 2 cut(s) | 377, 1256 |
| Bse8I | GATNNNNATC | 1 cut(s) | 395 |
| BseBI | CCWGG | 2 cut(s) | 99, 1188 |
| BseDI | CCNNGG | 2 cut(s) | 104, 662 |
| BseGI | GGATG | 2 cut(s) | 454, 952 |
| BseJI | GATNNNNATC | 1 cut(s) | 395 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 122, 925, 1176 |
| BseMII | CTCAG | 4 cut(s) | 234, 594, 1095, 1137 |
| BseNI | ACTGG | 2 cut(s) | 377, 1256 |
| BseRI | GAGGAG | 2 cut(s) | 232, 1189 |
| BseSI | GKGCMC | 1 cut(s) | 628 |
| BseXI | GCAGC | 4 cut(s) | 78, 99, 169, 1288 |
| Bsh1236I | CGCG | 2 cut(s) | 482, 647 |
| BshFI | GGCC | 4 cut(s) | 301, 305, 626, 693 |
| BshNI | GGYRCC | 2 cut(s) | 961, 1166 |
| BsiSI | CCGG | 4 cut(s) | 302, 497, 959, 1170 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 122, 925, 1176 |
| BsmAI | GTCTC | 2 cut(s) | 244, 611 |
| BsmI | GAATGC | 1 cut(s) | 484 |
| BsnI | GGCC | 4 cut(s) | 301, 305, 626, 693 |
| Bso31I | GGTCTC | 1 cut(s) | 244 |
| Bsp120I | GGGCCC | 1 cut(s) | 624 |
| Bsp1286I | GDGCHC | 1 cut(s) | 628 |
| Bsp143I | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| BspACI | CCGC | 1 cut(s) | 150 |
| BspANI | GGCC | 4 cut(s) | 301, 305, 626, 693 |
| BspCNI | CTCAG | 5 cut(s) | 4, 233, 595, 1096, 1136 |
| BspFNI | CGCG | 2 cut(s) | 482, 647 |
| BspHI | TCATGA | 1 cut(s) | 277 |
| BspLI | GGNNCC | 4 cut(s) | 495, 626, 963, 1168 |
| BspMI | ACCTGC | 1 cut(s) | 1360 |
| BspOI | GCTAGC | 1 cut(s) | 1229 |
| BspPI | GGATC | 1 cut(s) | 761 |
| BspT107I | GGYRCC | 2 cut(s) | 961, 1166 |
| BspTNI | GGTCTC | 1 cut(s) | 244 |
| BsrFI | RCCGGY | 2 cut(s) | 301, 958 |
| BsrI | ACTGG | 2 cut(s) | 377, 1256 |
| BssAI | RCCGGY | 2 cut(s) | 301, 958 |
| BssECI | CCNNGG | 2 cut(s) | 104, 662 |
| BssMI | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| BssNAI | GTATAC | 1 cut(s) | 312 |
| BssNI | GRCGYC | 1 cut(s) | 962 |
| BssT1I | CCWWGG | 1 cut(s) | 104 |
| Bst1107I | GTATAC | 1 cut(s) | 312 |
| Bst2UI | CCWGG | 2 cut(s) | 99, 1188 |
| Bst4CI | ACNGT | 3 cut(s) | 338, 663, 1315 |
| Bst6I | CTCTTC | 5 cut(s) | 250, 447, 609, 1270, 1290 |
| BstACI | GRCGYC | 1 cut(s) | 962 |
| BstC8I | GCNNGC | 4 cut(s) | 303, 1047, 1227, 1306 |
| BstDEI | CTNAG | 8 cut(s) | 12, 220, 326, 410, 489, 603, 1104, 1123 |
| BstDSI | CCRYGG | 1 cut(s) | 662 |
| BstF5I | GGATG | 2 cut(s) | 454, 952 |
| BstFNI | CGCG | 2 cut(s) | 482, 647 |
| BstH2I | RGCGCY | 2 cut(s) | 178, 965 |
| BstHHI | GCGC | 5 cut(s) | 177, 484, 647, 964, 1225 |
| BstKTI | GATC | 8 cut(s) | 199, 267, 346, 399, 700, 769, 799, 901 |
| BstMAI | GTCTC | 2 cut(s) | 244, 611 |
| BstMBI | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 80, 1352 |
| BstNI | CCWGG | 2 cut(s) | 99, 1188 |
| BstNSI | RCATGY | 1 cut(s) | 1049 |
| BstSCI | CCNGG | 3 cut(s) | 97, 1169, 1186 |
| BstSLI | GKGCMC | 1 cut(s) | 628 |
| BstUI | CGCG | 2 cut(s) | 482, 647 |
| BstV1I | GCAGC | 4 cut(s) | 78, 99, 169, 1288 |
| BstV2I | GAAGAC | 1 cut(s) | 1287 |
| BstX2I | RGATCY | 3 cut(s) | 196, 264, 796 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 235, 1033 |
| BstYI | RGATCY | 3 cut(s) | 196, 264, 796 |
| BstZ17I | GTATAC | 1 cut(s) | 312 |
| BsuI | GTATCC | 1 cut(s) | 235 |
| BsuRI | GGCC | 4 cut(s) | 301, 305, 626, 693 |
| BtgI | CCRYGG | 1 cut(s) | 662 |
| BtsCI | GGATG | 2 cut(s) | 454, 952 |
| BveI | ACCTGC | 1 cut(s) | 1360 |
| Cac8I | GCNNGC | 4 cut(s) | 303, 1047, 1227, 1306 |
| CciI | TCATGA | 1 cut(s) | 277 |
| CfoI | GCGC | 5 cut(s) | 177, 484, 647, 964, 1225 |
| Cfr10I | RCCGGY | 2 cut(s) | 301, 958 |
| Cfr13I | GGNCC | 4 cut(s) | 101, 494, 624, 625 |
| CseI | GACGC | 1 cut(s) | 636 |
| Csp6I | GTAC | 4 cut(s) | 9, 370, 809, 1012 |
| CviAII | CATG | 5 cut(s) | 202, 278, 791, 1046, 1291 |
| CviQI | GTAC | 4 cut(s) | 9, 370, 809, 1012 |
| DdeI | CTNAG | 8 cut(s) | 12, 220, 326, 410, 489, 603, 1104, 1123 |
| DinI | GGCGCC | 1 cut(s) | 963 |
| DpnI | GATC | 8 cut(s) | 198, 266, 345, 398, 699, 768, 798, 900 |
| DpnII | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| DraI | TTTAAA | 1 cut(s) | 721 |
| DraIII | CACNNNGTG | 1 cut(s) | 1270 |
| Eam1104I | CTCTTC | 5 cut(s) | 250, 447, 609, 1270, 1290 |
| EarI | CTCTTC | 5 cut(s) | 250, 447, 609, 1270, 1290 |
| Eco130I | CCWWGG | 1 cut(s) | 104 |
| Eco24I | GRGCYC | 1 cut(s) | 628 |
| Eco31I | GGTCTC | 1 cut(s) | 244 |
| Eco47I | GGWCC | 2 cut(s) | 101, 494 |
| EcoO109I | RGGNCCY | 2 cut(s) | 624, 625 |
| EcoRI | GAATTC | 1 cut(s) | 1094 |
| EcoRII | CCWGG | 2 cut(s) | 97, 1186 |
| EcoT14I | CCWWGG | 1 cut(s) | 104 |
| EcoT38I | GRGCYC | 1 cut(s) | 628 |
| EgeI | GGCGCC | 1 cut(s) | 963 |
| EheI | GGCGCC | 1 cut(s) | 963 |
| ErhI | CCWWGG | 1 cut(s) | 104 |
| FaeI | CATG | 5 cut(s) | 205, 281, 794, 1049, 1294 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 58, 90, 914, 946 |
| FatI | CATG | 5 cut(s) | 201, 277, 790, 1045, 1290 |
| FbaI | TGATCA | 1 cut(s) | 697 |
| FblI | GTMKAC | 2 cut(s) | 311, 915 |
| Fnu4HI | GCNGC | 5 cut(s) | 92, 113, 151, 183, 1302 |
| FokI | GGATG | 2 cut(s) | 461, 939 |
| FriOI | GRGCYC | 1 cut(s) | 628 |
| FseI | GGCCGGCC | 1 cut(s) | 305 |
| Fsp4HI | GCNGC | 5 cut(s) | 92, 113, 151, 183, 1302 |
| FspBI | CTAG | 7 cut(s) | 105, 179, 215, 233, 470, 971, 1226 |
| GlaI | GCGC | 5 cut(s) | 176, 483, 646, 963, 1224 |
| GluI | GCNGC | 5 cut(s) | 92, 113, 151, 183, 1302 |
| GsuI | CTGGAG | 1 cut(s) | 394 |
| HaeII | RGCGCY | 2 cut(s) | 178, 965 |
| HaeIII | GGCC | 4 cut(s) | 301, 305, 626, 693 |
| HapII | CCGG | 4 cut(s) | 302, 497, 959, 1170 |
| HgaI | GACGC | 1 cut(s) | 636 |
| HhaI | GCGC | 5 cut(s) | 177, 484, 647, 964, 1225 |
| Hin1I | GRCGYC | 1 cut(s) | 962 |
| Hin1II | CATG | 5 cut(s) | 205, 281, 794, 1049, 1294 |
| Hin6I | GCGC | 5 cut(s) | 175, 482, 645, 962, 1223 |
| HinP1I | GCGC | 5 cut(s) | 175, 482, 645, 962, 1223 |
| HincII | GTYRAC | 1 cut(s) | 1129 |
| HindII | GTYRAC | 1 cut(s) | 1129 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 7 cut(s) | 53, 473, 598, 821, 1084, 1110, 1231 |
| HpaII | CCGG | 4 cut(s) | 302, 497, 959, 1170 |
| HphI | GGTGA | 4 cut(s) | 16, 41, 866, 1282 |
| Hpy166II | GTNNAC | 3 cut(s) | 312, 916, 1129 |
| Hpy188I | TCNGA | 6 cut(s) | 348, 461, 652, 771, 907, 1089 |
| Hpy188III | TCNNGA | 6 cut(s) | 57, 278, 602, 818, 931, 991 |
| Hpy8I | GTNNAC | 3 cut(s) | 312, 916, 1129 |
| HpyAV | CCTTC | 8 cut(s) | 81, 140, 824, 863, 875, 928, 997, 1001 |
| HpyCH4III | ACNGT | 3 cut(s) | 338, 663, 1315 |
| HpyCH4V | TGCA | 6 cut(s) | 416, 587, 999, 1045, 1049, 1355 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 80, 1352 |
| HpyF3I | CTNAG | 8 cut(s) | 12, 220, 326, 410, 489, 603, 1104, 1123 |
| Hsp92I | GRCGYC | 1 cut(s) | 962 |
| Hsp92II | CATG | 5 cut(s) | 205, 281, 794, 1049, 1294 |
| HspAI | GCGC | 5 cut(s) | 175, 482, 645, 962, 1223 |
| KasI | GGCGCC | 1 cut(s) | 961 |
| KroI | GCCGGC | 1 cut(s) | 301 |
| KroNI | GCCGGC | 1 cut(s) | 303 |
| Ksp22I | TGATCA | 1 cut(s) | 697 |
| Kzo9I | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| LmnI | GCTCC | 1 cut(s) | 787 |
| Lsp1109I | GCAGC | 4 cut(s) | 78, 99, 169, 1288 |
| MaeI | CTAG | 7 cut(s) | 105, 179, 215, 233, 470, 971, 1226 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MalI | GATC | 8 cut(s) | 198, 266, 345, 398, 699, 768, 798, 900 |
| MboI | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| MfeI | CAATTG | 1 cut(s) | 1002 |
| MflI | RGATCY | 3 cut(s) | 196, 264, 796 |
| MhlI | GDGCHC | 1 cut(s) | 628 |
| MluCI | AATT | 5 cut(s) | 351, 1002, 1017, 1094, 1325 |
| Mly113I | GGCGCC | 1 cut(s) | 962 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 2 cut(s) | 30, 687 |
| MroNI | GCCGGC | 1 cut(s) | 301 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1094 |
| MseI | TTAA | 2 cut(s) | 720, 780 |
| MslI | CAYNNNNRTG | 2 cut(s) | 233, 1034 |
| MspI | CCGG | 4 cut(s) | 302, 497, 959, 1170 |
| MspR9I | CCNGG | 3 cut(s) | 99, 1171, 1188 |
| MunI | CAATTG | 1 cut(s) | 1002 |
| Mva1269I | GAATGC | 1 cut(s) | 484 |
| MvaI | CCWGG | 2 cut(s) | 99, 1188 |
| MvnI | CGCG | 2 cut(s) | 482, 647 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 80, 1352 |
| NaeI | GCCGGC | 1 cut(s) | 303 |
| NarI | GGCGCC | 1 cut(s) | 962 |
| NciI | CCSGG | 1 cut(s) | 1171 |
| NdeII | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| NgoMIV | GCCGGC | 1 cut(s) | 301 |
| NheI | GCTAGC | 1 cut(s) | 1225 |
| NlaIII | CATG | 5 cut(s) | 205, 281, 794, 1049, 1294 |
| NlaIV | GGNNCC | 4 cut(s) | 495, 626, 963, 1168 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 1049 |
| OliI | CACNNNNGTG | 2 cut(s) | 233, 1034 |
| PaeI | GCATGC | 1 cut(s) | 1049 |
| PagI | TCATGA | 1 cut(s) | 277 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 903 |
| PctI | GAATGC | 1 cut(s) | 484 |
| PdiI | GCCGGC | 1 cut(s) | 303 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1094 |
| PfeI | GAWTC | 6 cut(s) | 473, 598, 821, 1084, 1110, 1231 |
| PkrI | GCNGC | 5 cut(s) | 93, 114, 152, 184, 1303 |
| PleI | GAGTC | 1 cut(s) | 47 |
| PluTI | GGCGCC | 1 cut(s) | 965 |
| PpsI | GAGTC | 1 cut(s) | 47 |
| Psp6I | CCWGG | 2 cut(s) | 97, 1186 |
| PspGI | CCWGG | 2 cut(s) | 97, 1186 |
| PspN4I | GGNNCC | 4 cut(s) | 495, 626, 963, 1168 |
| PspOMI | GGGCCC | 1 cut(s) | 624 |
| PspPI | GGNCC | 4 cut(s) | 101, 494, 624, 625 |
| PsuI | RGATCY | 3 cut(s) | 196, 264, 796 |
| RigI | GGCCGGCC | 1 cut(s) | 305 |
| RsaI | GTAC | 4 cut(s) | 10, 371, 810, 1013 |
| RsaNI | GTAC | 4 cut(s) | 9, 370, 809, 1012 |
| RseI | CAYNNNNRTG | 2 cut(s) | 233, 1034 |
| SaqAI | TTAA | 2 cut(s) | 720, 780 |
| SatI | GCNGC | 5 cut(s) | 92, 113, 151, 183, 1302 |
| Sau3AI | GATC | 8 cut(s) | 196, 264, 343, 396, 697, 766, 796, 898 |
| Sau96I | GGNCC | 4 cut(s) | 101, 494, 624, 625 |
| ScaI | AGTACT | 2 cut(s) | 10, 371 |
| SchI | GAGTC | 1 cut(s) | 47 |
| ScrFI | CCNGG | 3 cut(s) | 99, 1171, 1188 |
| SduI | GDGCHC | 1 cut(s) | 628 |
| SfoI | GGCGCC | 1 cut(s) | 963 |
| SgrAI | CRCCGGYG | 1 cut(s) | 958 |
| SinI | GGWCC | 2 cut(s) | 101, 494 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 233, 1034 |
| SmlI | CTYRAG | 3 cut(s) | 55, 78, 170 |
| SmoI | CTYRAG | 3 cut(s) | 55, 78, 170 |
| SpeI | ACTAGT | 1 cut(s) | 970 |
| SphI | GCATGC | 1 cut(s) | 1049 |
| Sse9I | AATT | 5 cut(s) | 351, 1002, 1017, 1094, 1325 |
| SsiI | CCGC | 1 cut(s) | 150 |
| SspDI | GGCGCC | 1 cut(s) | 961 |
| SspI | AATATT | 1 cut(s) | 832 |
| SspMI | CTAG | 7 cut(s) | 105, 179, 215, 233, 470, 971, 1226 |
| StyD4I | CCNGG | 3 cut(s) | 97, 1169, 1186 |
| StyI | CCWWGG | 1 cut(s) | 104 |
| TaaI | ACNGT | 3 cut(s) | 338, 663, 1315 |
| TaqI | TCGA | 5 cut(s) | 817, 897, 990, 1248, 1348 |
| TasI | AATT | 5 cut(s) | 351, 1002, 1017, 1094, 1325 |
| TatI | WGTACW | 3 cut(s) | 8, 369, 808 |
| TauI | GCSGC | 1 cut(s) | 153 |
| TfiI | GAWTC | 6 cut(s) | 473, 598, 821, 1084, 1110, 1231 |
| Tru1I | TTAA | 2 cut(s) | 720, 780 |
| Tru9I | TTAA | 2 cut(s) | 720, 780 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| TseI | GCWGC | 4 cut(s) | 91, 112, 182, 1301 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 3 cut(s) | 465, 807, 1102 |
| TspGWI | ACGGA | 2 cut(s) | 800, 893 |
| VpaK11BI | GGWCC | 2 cut(s) | 101, 494 |
| XapI | RAATTY | 3 cut(s) | 1017, 1094, 1325 |
| XceI | RCATGY | 1 cut(s) | 1049 |
| XmaJI | CCTAGG | 1 cut(s) | 104 |
| XmiI | GTMKAC | 2 cut(s) | 311, 915 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1094 |
| XspI | CTAG | 7 cut(s) | 105, 179, 215, 233, 470, 971, 1226 |
| ZrmI | AGTACT | 2 cut(s) | 10, 371 |