Rmu_sc0002164.1_g000025

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002164.1
OG0001697
Physical Location & Seq
Forward (+)
102251 .. 102568
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002164.1_g000025.1.cds

Sequence Viewer

Length: 318 bp
atgataggaagagaccctaaatgttgggagaaaccgaacgagttctttcctggaagattcttagacagcgggattgattacaaaggaaagaattatgagcttttaccatttggggcaggaaggaggggttgtcctggtatgaacttcggtgtacaggtagttgagcttgcactcgccaatttgctttattgttttgaatgggaactacctgatggggtaagaggagatgacttggacatgaaggaagctgctggccatacagtgcagaagaaagttcctctaagtttagctgctagaccagcactgctagtaagctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

105

Amino Acids

11.64

Weight (kDa)

5.78

Isoelectric Point (pI)

22.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 69
AcoI YGGCCR 1 cut(s) 253
AfaI GTAC 1 cut(s) 153
AgsI TTSAA 1 cut(s) 197
AjnI CCWGG 2 cut(s) 49, 133
AluBI AGCT 5 cut(s) 100, 166, 248, 290, 315
AluI AGCT 5 cut(s) 100, 166, 248, 290, 315
Alw26I GTCTC 1 cut(s) 6
AoxI GGCC 1 cut(s) 253
ApeKI GCWGC 2 cut(s) 248, 290
Asp700I GAANNNNTTC 1 cut(s) 41
BalI TGGCCA 1 cut(s) 255
BbvI GCAGC 2 cut(s) 235, 277
BccI CCATC 1 cut(s) 206
BciT130I CCWGG 2 cut(s) 51, 135
BcoDI GTCTC 1 cut(s) 6
BfaI CTAG 2 cut(s) 294, 308
BisI GCNGC 2 cut(s) 249, 291
BlsI GCNGC 2 cut(s) 250, 292
Bme1390I CCNGG 2 cut(s) 51, 135
BmrFI CCNGG 2 cut(s) 51, 135
BsaI GGTCTC 1 cut(s) 6
BsaXI ACNNNNNCTCC 2 cut(s) 115, 145
BseBI CCWGG 2 cut(s) 51, 135
BseRI GAGGAG 1 cut(s) 237
BseXI GCAGC 2 cut(s) 235, 277
BsgI GTGCAG 1 cut(s) 284
BshFI GGCC 1 cut(s) 255
BsmAI GTCTC 1 cut(s) 6
BsnI GGCC 1 cut(s) 255
Bso31I GGTCTC 1 cut(s) 6
Bsp1407I TGTACA 1 cut(s) 151
BspACI CCGC 1 cut(s) 69
BspANI GGCC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 6
BsrGI TGTACA 1 cut(s) 151
Bst2UI CCWGG 2 cut(s) 51, 135
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 1 cut(s) 4
BstAUI TGTACA 1 cut(s) 151
BstC8I GCNNGC 2 cut(s) 168, 253
BstDEI CTNAG 2 cut(s) 61, 281
BstMAI GTCTC 1 cut(s) 6
BstMWI GCNNNNNNNGC 1 cut(s) 299
BstNI CCWGG 2 cut(s) 51, 135
BstSCI CCNGG 2 cut(s) 49, 133
BstV1I GCAGC 2 cut(s) 235, 277
BsuRI GGCC 1 cut(s) 255
BtsI GCAGTG 1 cut(s) 302
BtsIMutI CAGTG 2 cut(s) 267, 302
Cac8I GCNNGC 2 cut(s) 168, 253
Csp6I GTAC 1 cut(s) 152
CviAII CATG 1 cut(s) 238
CviJI RGCY 6 cut(s) 100, 166, 248, 255, 290, 315
CviKI_1 RGCY 6 cut(s) 100, 166, 248, 255, 290, 315
CviQI GTAC 1 cut(s) 152
DdeI CTNAG 2 cut(s) 61, 281
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
Eco31I GGTCTC 1 cut(s) 6
EcoRII CCWGG 2 cut(s) 49, 133
FaeI CATG 1 cut(s) 241
FaiI YATR 4 cut(s) 96, 140, 239, 258
FatI CATG 1 cut(s) 237
FauI CCCGC 1 cut(s) 62
Fnu4HI GCNGC 2 cut(s) 249, 291
Fsp4HI GCNGC 2 cut(s) 249, 291
FspBI CTAG 2 cut(s) 294, 308
GluI GCNGC 2 cut(s) 249, 291
HaeIII GGCC 1 cut(s) 255
Hin1II CATG 1 cut(s) 241
HinfI GANTC 1 cut(s) 57
Hpy166II GTNNAC 1 cut(s) 152
Hpy8I GTNNAC 1 cut(s) 152
HpyAV CCTTC 2 cut(s) 114, 235
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4V TGCA 2 cut(s) 170, 265
HpyF10VI GCNNNNNNNGC 1 cut(s) 299
HpyF3I CTNAG 2 cut(s) 61, 281
Hsp92II CATG 1 cut(s) 241
LpnPI CCDG 9 cut(s) 36, 63, 102, 120, 140, 147, 222, 237, 312
Lsp1109I GCAGC 2 cut(s) 235, 277
MaeI CTAG 2 cut(s) 294, 308
MboII GAAGA 3 cut(s) 21, 66, 280
MlsI TGGCCA 1 cut(s) 255
MluCI AATT 2 cut(s) 91, 178
MluNI TGGCCA 1 cut(s) 255
MnlI CCTC 3 cut(s) 117, 215, 288
Mox20I TGGCCA 1 cut(s) 255
MroXI GAANNNNTTC 1 cut(s) 41
MscI TGGCCA 1 cut(s) 255
Msp20I TGGCCA 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 69
MspR9I CCNGG 2 cut(s) 51, 135
MvaI CCWGG 2 cut(s) 51, 135
MwoI GCNNNNNNNGC 1 cut(s) 299
NlaIII CATG 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 1 cut(s) 57
PfoI TCCNGGA 1 cut(s) 49
PkrI GCNGC 2 cut(s) 250, 292
Psp6I CCWGG 2 cut(s) 49, 133
PspGI CCWGG 2 cut(s) 49, 133
RsaI GTAC 1 cut(s) 153
RsaNI GTAC 1 cut(s) 152
SatI GCNGC 2 cut(s) 249, 291
ScrFI CCNGG 2 cut(s) 51, 135
SetI ASST 7 cut(s) 102, 159, 168, 211, 250, 292, 317
Sse9I AATT 2 cut(s) 91, 178
SsiI CCGC 1 cut(s) 69
SspMI CTAG 2 cut(s) 294, 308
StyD4I CCNGG 2 cut(s) 49, 133
TaaI ACNGT 1 cut(s) 262
TasI AATT 2 cut(s) 91, 178
TatI WGTACW 1 cut(s) 151
TfiI GAWTC 1 cut(s) 57
TscAI CASTG 2 cut(s) 267, 309
TseI GCWGC 2 cut(s) 248, 290
TspDTI ATGAA 2 cut(s) 155, 254
TspRI CASTG 2 cut(s) 267, 309
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 2 cut(s) 294, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.