RLG00000004402

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
59074496 .. 59076154
1659 bp
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UTR
Exon/CDS
Intron
RLM00000004402

Sequence Viewer

Length: 465 bp
ATGAGTTCTTACTTGTCCATATCCATGGTTCTCCCATTCTTGGTTTTTCTCATCCCCTTTACTTTCTTTCTTTTGATCAAGCAAAGGAAGCTCAATGCTCAACTGAAGAGGTTGCCTCCTGGTCCTAGAAGGATACCTCTCATTGGGAACCTTCATCTTCTCTTTAATGATTTACCCCAATCTGTCCGGGAACATCTTGCCAATAAATATGGACCATTCATGTTCTTGCAGTTAGGCTCAATATCTACTTTAGTAGTATCCTCAGCCCAAATGGATATATTTACTGGAGGGACTGATACAACCACATCGACACTGGCGTGGACAATGGATGGGCTAATCAGGAACCCATTGGCGTTGACGAAAGCACAGAATGAGGTTATTGAGCTTGCACTTGCTAATCTTATCTATCGTTTTGACTGGGAACTGTTGGTCTTACAGTGCAAAAGAAAGTTCATTTATGTCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

155

Amino Acids

17.56

Weight (kDa)

9.77

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 91 9.8e-06 Cytochrome P450
p450 PF00067 91 - 127 8.1e-06 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 125
AfiI CCNNNNNNNGG 2 cut(s) 40, 143
AjnI CCWGG 1 cut(s) 118
AleI CACNNNNGTG 1 cut(s) 316
AluBI AGCT 2 cut(s) 91, 385
AluI AGCT 2 cut(s) 91, 385
AspS9I GGNCC 2 cut(s) 122, 212
AsuC2I CCSGG 1 cut(s) 188
AvaII GGWCC 2 cut(s) 122, 212
BbvCI CCTCAGC 1 cut(s) 262
BccI CCATC 1 cut(s) 323
BciT130I CCWGG 1 cut(s) 120
BciVI GTATCC 2 cut(s) 126, 268
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 1 cut(s) 188
BfaI CTAG 2 cut(s) 126, 463
BfuI GTATCC 2 cut(s) 126, 268
Bme1390I CCNGG 2 cut(s) 120, 188
Bme18I GGWCC 2 cut(s) 122, 212
BmgT120I GGNCC 2 cut(s) 122, 212
BmiI GGNNCC 2 cut(s) 149, 344
BmrFI CCNGG 2 cut(s) 120, 188
BmrI ACTGGG 1 cut(s) 427
BmuI ACTGGG 1 cut(s) 427
BplI GAGNNNNNCTC 2 cut(s) 100, 132
BpmI CTGGAG 1 cut(s) 306
Bpu10I CCTNAGC 1 cut(s) 262
BpuMI CCSGG 1 cut(s) 188
BsaJI CCNNGG 1 cut(s) 24
Bsc4I CCNNNNNNNGG 2 cut(s) 40, 143
Bse1I ACTGG 3 cut(s) 289, 318, 422
BseBI CCWGG 1 cut(s) 120
BseDI CCNNGG 1 cut(s) 24
BseGI GGATG 2 cut(s) 51, 334
BseLI CCNNNNNNNGG 2 cut(s) 40, 143
BseMII CTCAG 1 cut(s) 276
BseNI ACTGG 3 cut(s) 289, 318, 422
BsiSI CCGG 1 cut(s) 187
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 2 cut(s) 40, 143
BsmFI GGGAC 1 cut(s) 304
Bsp143I GATC 1 cut(s) 75
Bsp19I CCATGG 1 cut(s) 24
BspCNI CTCAG 1 cut(s) 275
BspLI GGNNCC 2 cut(s) 149, 344
BsrI ACTGG 3 cut(s) 289, 318, 422
BssECI CCNNGG 1 cut(s) 24
BssMI GATC 1 cut(s) 75
BssT1I CCWWGG 1 cut(s) 24
Bst2UI CCWGG 1 cut(s) 120
Bst4CI ACNGT 2 cut(s) 426, 438
Bst6I CTCTTC 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 387
BstDEI CTNAG 1 cut(s) 262
BstDSI CCRYGG 1 cut(s) 24
BstF5I GGATG 2 cut(s) 51, 334
BstKTI GATC 1 cut(s) 78
BstMBI GATC 1 cut(s) 75
BstMWI GCNNNNNNNGC 1 cut(s) 88
BstNI CCWGG 1 cut(s) 120
BstSCI CCNGG 2 cut(s) 118, 186
BstXI CCANNNNNNTGG 1 cut(s) 25
BsuI GTATCC 2 cut(s) 126, 268
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 2 cut(s) 51, 334
BtsIMutI CAGTG 2 cut(s) 311, 443
Cac8I GCNNGC 1 cut(s) 387
Cfr13I GGNCC 2 cut(s) 122, 212
CviAII CATG 2 cut(s) 25, 220
CviJI RGCY 5 cut(s) 91, 237, 266, 334, 385
CviKI_1 RGCY 5 cut(s) 91, 237, 266, 334, 385
DdeI CTNAG 1 cut(s) 262
DpnI GATC 1 cut(s) 77
DpnII GATC 1 cut(s) 75
Eam1104I CTCTTC 1 cut(s) 101
EarI CTCTTC 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 24
Eco47I GGWCC 2 cut(s) 122, 212
Eco57I CTGAAG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 118
EcoT14I CCWWGG 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 24
FaeI CATG 2 cut(s) 28, 223
FaiI YATR 6 cut(s) 20, 26, 210, 221, 278, 459
FaqI GGGAC 1 cut(s) 304
FatI CATG 2 cut(s) 24, 219
FbaI TGATCA 1 cut(s) 75
FokI GGATG 2 cut(s) 38, 341
FspBI CTAG 2 cut(s) 126, 463
GsuI CTGGAG 1 cut(s) 306
HapII CCGG 1 cut(s) 187
Hin1II CATG 2 cut(s) 28, 223
HincII GTYRAC 1 cut(s) 357
HindII GTYRAC 1 cut(s) 357
HpaII CCGG 1 cut(s) 187
Hpy166II GTNNAC 2 cut(s) 321, 357
Hpy188III TCNNGA 1 cut(s) 340
Hpy8I GTNNAC 2 cut(s) 321, 357
HpyAV CCTTC 2 cut(s) 123, 161
HpyCH4III ACNGT 2 cut(s) 426, 438
HpyCH4V TGCA 3 cut(s) 229, 389, 441
HpyF10VI GCNNNNNNNGC 1 cut(s) 88
HpyF3I CTNAG 1 cut(s) 262
Hsp92II CATG 2 cut(s) 28, 223
Ksp22I TGATCA 1 cut(s) 75
Kzo9I GATC 1 cut(s) 75
LpnPI CCDG 7 cut(s) 105, 132, 200, 270, 299, 325, 403
MaeI CTAG 2 cut(s) 126, 463
MalI GATC 1 cut(s) 77
MboI GATC 1 cut(s) 75
MboII GAAGA 2 cut(s) 118, 149
MnlI CCTC 6 cut(s) 102, 126, 147, 271, 281, 367
MseI TTAA 1 cut(s) 165
MslI CAYNNNNRTG 2 cut(s) 23, 316
MspI CCGG 1 cut(s) 187
MspR9I CCNGG 2 cut(s) 120, 188
MvaI CCWGG 1 cut(s) 120
MwoI GCNNNNNNNGC 1 cut(s) 88
NciI CCSGG 1 cut(s) 188
NcoI CCATGG 1 cut(s) 24
NdeII GATC 1 cut(s) 75
NlaIII CATG 2 cut(s) 28, 223
NlaIV GGNNCC 2 cut(s) 149, 344
OliI CACNNNNGTG 1 cut(s) 316
PcsI WCGNNNNNNNCGW 1 cut(s) 314
PfoI TCCNGGA 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 118
PspGI CCWGG 1 cut(s) 118
PspN4I GGNNCC 2 cut(s) 149, 344
PspPI GGNCC 2 cut(s) 122, 212
RseI CAYNNNNRTG 2 cut(s) 23, 316
SaqAI TTAA 1 cut(s) 165
Sau3AI GATC 1 cut(s) 75
Sau96I GGNCC 2 cut(s) 122, 212
ScrFI CCNGG 2 cut(s) 120, 188
SetI ASST 6 cut(s) 93, 113, 139, 153, 378, 387
SinI GGWCC 2 cut(s) 122, 212
SmiMI CAYNNNNRTG 2 cut(s) 23, 316
SspMI CTAG 2 cut(s) 126, 463
StyD4I CCNGG 2 cut(s) 118, 186
StyI CCWWGG 1 cut(s) 24
TaaI ACNGT 2 cut(s) 426, 438
TaqI TCGA 1 cut(s) 308
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TscAI CASTG 2 cut(s) 318, 443
TspDTI ATGAA 3 cut(s) 143, 208, 442
TspRI CASTG 2 cut(s) 318, 443
VpaK11BI GGWCC 2 cut(s) 122, 212
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XspI CTAG 2 cut(s) 126, 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.