pycom06g14570

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0001697
Physical Location & Seq
Reverse (-)
19282765 .. 19284231
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g14570.4

Sequence Viewer

Length: 960 bp
ATGACCTCATTTTTTCAGGTAGGCCGGCCTTGTATATTGCAAAGAAGTTTAGCTAACTATGTTAATCTGACATTTACTCCCTATGGGGAGCATTGGAGGGAGGTCAGAAAGATTGTGATCTTGGAACTGCTTAGTGCGGTTCAAATGTTTCAGTCTGTGAGGGATGAAGAGTTCAATGGCCTTGATCAAAAGATAGAGAAATCTTCTAAACGCTTGGACAATCTCTACGACAGAGTGATTGAGGAACATCTTGATCCGAAAAGGCCTAAACCGGAGCATGAAGATCTTGTTGACGTACTCCTTCAAGTTCAAAACGATCCAAGTCAAACAATCGCCCTCACTAATGACCAAATTAAGGGTGTTCTAAGCGACATGTTTTCTGCGGGGACTGATACTTCCTCACCCACACTGGTATGGACAATGGCTGAATTGATTCAGAATCCCCGCGCATTGAGGAAAGCTCAAGACGAGGTGAGAGAAGTTTTGGAGGGAAAAGGGAAGGTGGAAGAAAGTGATCTGTCCGAACTCATGTACCTAAAGTTGGTCTTGAAGGATAGTTTTAGACTTCATCCACCGGTGCAATTACTAGTTCCAAGAGAAACCTTAGAGAGTTGCAGAATCGAAGGGTACAAAATTCCTGCCATCACAATGGTGTTTGTGCATGCAAAAATGATAGGAAAGATTCATAGACAGCTCAATTCACTTGACTACAAAGGAAACCATTTTGAACTTTTACCATTTGGCACCGGAAGGAGGGGTTGTCCTGGTATCAACTTTGGTGTGAAGCTGATTGAGCTTGCGCTAGCGAATCTGCTTTATTGTTTCGACTGGGAAACTGCCTCACGGGGTGAGAAGCGAAGACTTGGACACGGAAGAGGCTGCTGGCCTTACAGTTGGCCAAAAAGTTCCTCAATTTCTAGCTGCTCGACCTGCATATTGACAAGCTATGTTGCACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

320

Amino Acids

36.4

Weight (kDa)

7.08

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 938
AccB1I GGYRCC 1 cut(s) 743
AccII CGCG 1 cut(s) 447
AciI CCGC 3 cut(s) 137, 383, 445
AclWI GGATC 2 cut(s) 248, 311
AcoI YGGCCR 1 cut(s) 896
AcsI RAATTY 1 cut(s) 633
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 3 cut(s) 297, 533, 629
AfiI CCNNNNNNNGG 3 cut(s) 355, 541, 753
AflIII ACRYGT 1 cut(s) 372
AgeI ACCGGT 1 cut(s) 574
AgsI TTSAA 6 cut(s) 143, 175, 305, 311, 550, 728
AhlI ACTAGT 1 cut(s) 586
AjnI CCWGG 1 cut(s) 763
AleI CACNNNNGTG 1 cut(s) 650
AloI GAACNNNNNNTCC 2 cut(s) 155, 187
AluBI AGCT 7 cut(s) 53, 461, 694, 787, 796, 921, 945
AluI AGCT 7 cut(s) 53, 461, 694, 787, 796, 921, 945
AlwI GGATC 2 cut(s) 248, 311
AoxI GGCC 6 cut(s) 22, 26, 178, 263, 884, 896
ApeKI GCWGC 2 cut(s) 879, 921
ApoI RAATTY 1 cut(s) 633
AsiGI ACCGGT 1 cut(s) 574
Asp700I GAANNNNTTC 1 cut(s) 432
AspLEI GCGC 2 cut(s) 449, 802
AsuHPI GGTGA 3 cut(s) 393, 484, 860
AsuNHI GCTAGC 1 cut(s) 802
BaeI ACNNNNGTAYC 2 cut(s) 515, 548
BalI TGGCCA 1 cut(s) 898
BanI GGYRCC 1 cut(s) 743
BbsI GAAGAC 1 cut(s) 865
BbvI GCAGC 2 cut(s) 866, 908
BccI CCATC 1 cut(s) 650
BciT130I CCWGG 1 cut(s) 765
BclI TGATCA 1 cut(s) 184
BcuI ACTAGT 1 cut(s) 586
BfaI CTAG 3 cut(s) 587, 803, 918
BfuAI ACCTGC 1 cut(s) 938
BglII AGATCT 1 cut(s) 283
BisI GCNGC 2 cut(s) 880, 922
BlsI GCNGC 2 cut(s) 881, 923
Bme1390I CCNGG 1 cut(s) 765
BmiI GGNNCC 1 cut(s) 745
BmrFI CCNGG 1 cut(s) 765
BmrI ACTGGG 1 cut(s) 838
BmtI GCTAGC 1 cut(s) 806
BmuI ACTGGG 1 cut(s) 838
BpiI GAAGAC 1 cut(s) 865
BplI GAGNNNNNCTC 2 cut(s) 445, 477
BpuEI CTTGAG 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 116
BsaWI WCCGGW 3 cut(s) 271, 574, 746
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 745, 775
Bsc4I CCNNNNNNNGG 3 cut(s) 355, 541, 753
Bse118I RCCGGY 2 cut(s) 24, 574
Bse1I ACTGG 2 cut(s) 414, 833
Bse8I GATNNNNATC 1 cut(s) 116
BseBI CCWGG 1 cut(s) 765
BseGI GGATG 2 cut(s) 169, 568
BseJI GATNNNNATC 1 cut(s) 116
BseLI CCNNNNNNNGG 3 cut(s) 355, 541, 753
BseNI ACTGG 2 cut(s) 414, 833
BseXI GCAGC 2 cut(s) 866, 908
Bsh1236I CGCG 1 cut(s) 447
BshFI GGCC 6 cut(s) 24, 28, 180, 265, 886, 898
BshNI GGYRCC 1 cut(s) 743
BshTI ACCGGT 1 cut(s) 574
BsiSI CCGG 4 cut(s) 25, 272, 575, 747
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 3 cut(s) 355, 541, 753
BsmFI GGGAC 1 cut(s) 400
BsnI GGCC 6 cut(s) 24, 28, 180, 265, 886, 898
Bsp143I GATC 6 cut(s) 117, 184, 253, 283, 316, 514
BspACI CCGC 3 cut(s) 137, 383, 445
BspANI GGCC 6 cut(s) 24, 28, 180, 265, 886, 898
BspFNI CGCG 1 cut(s) 447
BspLI GGNNCC 1 cut(s) 745
BspMI ACCTGC 1 cut(s) 938
BspOI GCTAGC 1 cut(s) 806
BspPI GGATC 2 cut(s) 248, 311
BspT107I GGYRCC 1 cut(s) 743
BsrFI RCCGGY 2 cut(s) 24, 574
BsrI ACTGG 2 cut(s) 414, 833
BssAI RCCGGY 2 cut(s) 24, 574
BssMI GATC 6 cut(s) 117, 184, 253, 283, 316, 514
Bst2UI CCWGG 1 cut(s) 765
Bst4CI ACNGT 1 cut(s) 893
Bst6I CTCTTC 2 cut(s) 162, 868
BstC8I GCNNGC 5 cut(s) 26, 663, 798, 804, 884
BstDEI CTNAG 3 cut(s) 131, 365, 604
BstF5I GGATG 2 cut(s) 169, 568
BstFNI CGCG 1 cut(s) 447
BstHHI GCGC 2 cut(s) 449, 802
BstKTI GATC 6 cut(s) 120, 187, 256, 286, 319, 517
BstMBI GATC 6 cut(s) 117, 184, 253, 283, 316, 514
BstMWI GCNNNNNNNGC 2 cut(s) 793, 930
BstNI CCWGG 1 cut(s) 765
BstNSI RCATGY 2 cut(s) 376, 665
BstSCI CCNGG 1 cut(s) 763
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 2 cut(s) 866, 908
BstV2I GAAGAC 1 cut(s) 865
BstX2I RGATCY 1 cut(s) 283
BstXI CCANNNNNNTGG 1 cut(s) 649
BstYI RGATCY 1 cut(s) 283
BsuRI GGCC 6 cut(s) 24, 28, 180, 265, 886, 898
BtsCI GGATG 2 cut(s) 169, 568
BtsIMutI CAGTG 1 cut(s) 407
BveI ACCTGC 1 cut(s) 938
Cac8I GCNNGC 5 cut(s) 26, 663, 798, 804, 884
CfoI GCGC 2 cut(s) 449, 802
Cfr10I RCCGGY 2 cut(s) 24, 574
Csp6I GTAC 3 cut(s) 296, 532, 628
CspAI ACCGGT 1 cut(s) 574
CviAII CATG 4 cut(s) 278, 373, 529, 662
CviQI GTAC 3 cut(s) 296, 532, 628
DdeI CTNAG 3 cut(s) 131, 365, 604
DpnI GATC 6 cut(s) 119, 186, 255, 285, 318, 516
DpnII GATC 6 cut(s) 117, 184, 253, 283, 316, 514
DraIII CACNNNGTG 1 cut(s) 848
EaeI YGGCCR 1 cut(s) 896
Eam1104I CTCTTC 2 cut(s) 162, 868
EarI CTCTTC 2 cut(s) 162, 868
Eco147I AGGCCT 1 cut(s) 265
EcoRII CCWGG 1 cut(s) 763
FaeI CATG 4 cut(s) 281, 376, 532, 665
FalI AAGNNNNNCTT 2 cut(s) 530, 562
FaqI GGGAC 1 cut(s) 400
FatI CATG 4 cut(s) 277, 372, 528, 661
FauI CCCGC 2 cut(s) 376, 452
FbaI TGATCA 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 880, 922
FokI GGATG 2 cut(s) 176, 555
FseI GGCCGGCC 1 cut(s) 28
Fsp4HI GCNGC 2 cut(s) 880, 922
FspBI CTAG 3 cut(s) 587, 803, 918
GlaI GCGC 2 cut(s) 448, 801
GluI GCNGC 2 cut(s) 880, 922
HaeIII GGCC 6 cut(s) 24, 28, 180, 265, 886, 898
HapII CCGG 4 cut(s) 25, 272, 575, 747
HhaI GCGC 2 cut(s) 449, 802
Hin1II CATG 4 cut(s) 281, 376, 532, 665
Hin6I GCGC 2 cut(s) 447, 800
HinP1I GCGC 2 cut(s) 447, 800
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 5 cut(s) 433, 439, 618, 682, 808
HpaII CCGG 4 cut(s) 25, 272, 575, 747
HphI GGTGA 3 cut(s) 393, 484, 860
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 5 cut(s) 69, 107, 258, 438, 523
Hpy188III TCNNGA 3 cut(s) 251, 464, 547
Hpy8I GTNNAC 1 cut(s) 292
HpyAV CCTTC 5 cut(s) 311, 493, 544, 617, 744
HpyCH4III ACNGT 1 cut(s) 893
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 7 cut(s) 40, 580, 615, 661, 665, 933, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 793, 930
HpyF3I CTNAG 3 cut(s) 131, 365, 604
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 4 cut(s) 281, 376, 532, 665
HspAI GCGC 2 cut(s) 447, 800
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 6 cut(s) 117, 184, 253, 283, 316, 514
LmnI GCTCC 2 cut(s) 88, 274
Lsp1109I GCAGC 2 cut(s) 866, 908
MaeI CTAG 3 cut(s) 587, 803, 918
MaeII ACGT 1 cut(s) 294
MalI GATC 6 cut(s) 119, 186, 255, 285, 318, 516
MboI GATC 6 cut(s) 117, 184, 253, 283, 316, 514
MboII GAAGA 6 cut(s) 179, 195, 293, 518, 870, 885
MflI RGATCY 1 cut(s) 283
MlsI TGGCCA 1 cut(s) 898
MluCI AATT 6 cut(s) 351, 428, 581, 633, 697, 912
MluNI TGGCCA 1 cut(s) 898
Mox20I TGGCCA 1 cut(s) 898
MroNI GCCGGC 1 cut(s) 24
MroXI GAANNNNTTC 1 cut(s) 432
MscI TGGCCA 1 cut(s) 898
MseI TTAA 2 cut(s) 63, 354
MslI CAYNNNNRTG 3 cut(s) 412, 647, 650
Msp20I TGGCCA 1 cut(s) 898
MspI CCGG 4 cut(s) 25, 272, 575, 747
MspR9I CCNGG 1 cut(s) 765
MvaI CCWGG 1 cut(s) 765
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 2 cut(s) 793, 930
NaeI GCCGGC 1 cut(s) 26
NdeII GATC 6 cut(s) 117, 184, 253, 283, 316, 514
NgoMIV GCCGGC 1 cut(s) 24
NheI GCTAGC 1 cut(s) 802
NlaIII CATG 4 cut(s) 281, 376, 532, 665
NlaIV GGNNCC 1 cut(s) 745
NspI RCATGY 2 cut(s) 376, 665
OliI CACNNNNGTG 1 cut(s) 650
PaeI GCATGC 1 cut(s) 665
PceI AGGCCT 1 cut(s) 265
PciI ACATGT 1 cut(s) 372
PdiI GCCGGC 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 5 cut(s) 433, 439, 618, 682, 808
PinAI ACCGGT 1 cut(s) 574
PkrI GCNGC 2 cut(s) 881, 923
PscI ACATGT 1 cut(s) 372
Psp6I CCWGG 1 cut(s) 763
PspGI CCWGG 1 cut(s) 763
PspN4I GGNNCC 1 cut(s) 745
PsuI RGATCY 1 cut(s) 283
RigI GGCCGGCC 1 cut(s) 28
RsaI GTAC 3 cut(s) 297, 533, 629
RsaNI GTAC 3 cut(s) 296, 532, 628
RseI CAYNNNNRTG 3 cut(s) 412, 647, 650
SaqAI TTAA 2 cut(s) 63, 354
SatI GCNGC 2 cut(s) 880, 922
Sau3AI GATC 6 cut(s) 117, 184, 253, 283, 316, 514
ScrFI CCNGG 1 cut(s) 765
SgrAI CRCCGGYG 1 cut(s) 574
SmiMI CAYNNNNRTG 3 cut(s) 412, 647, 650
SmlI CTYRAG 1 cut(s) 462
SmoI CTYRAG 1 cut(s) 462
SpeI ACTAGT 1 cut(s) 586
SphI GCATGC 1 cut(s) 665
Sse9I AATT 6 cut(s) 351, 428, 581, 633, 697, 912
SseBI AGGCCT 1 cut(s) 265
SsiI CCGC 3 cut(s) 137, 383, 445
SspMI CTAG 3 cut(s) 587, 803, 918
StuI AGGCCT 1 cut(s) 265
StyD4I CCNGG 1 cut(s) 763
TaaI ACNGT 1 cut(s) 893
TaiI ACGT 1 cut(s) 297
TaqI TCGA 3 cut(s) 621, 825, 926
TasI AATT 6 cut(s) 351, 428, 581, 633, 697, 912
TfiI GAWTC 5 cut(s) 433, 439, 618, 682, 808
Tru1I TTAA 2 cut(s) 63, 354
Tru9I TTAA 2 cut(s) 63, 354
TscAI CASTG 1 cut(s) 414
TseI GCWGC 2 cut(s) 879, 921
TspDTI ATGAA 4 cut(s) 180, 294, 557, 674
TspGWI ACGGA 1 cut(s) 885
TspRI CASTG 1 cut(s) 414
XapI RAATTY 1 cut(s) 633
XceI RCATGY 2 cut(s) 376, 665
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 3 cut(s) 587, 803, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.