Rh2BG418600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
59003684 .. 59004016
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG418600.1

Sequence Viewer

Length: 333 bp
ATGGTTCCAAGAGTTTCACAGGCATTGCATCCAGAGTATATAAATTCGCGGTTCTTGAGGGAGCAAGTTTTTAAAATGATGGATTCAAGGGTGGTAAACCTTGAGGTGGCTTTAGCCTTCCAACCCCCGAAGTTGGAATCATGCTTTTGTAACAATTGTTGTGTTGACTTTTTTCGCTGTCGTTATCTGGCGTTTACTGTGGAAGCTCTCCGGAATTTCCCATTAGGAGAGGAGTTGATGACTCTGCTATGCCCATCTTGTAAGTGTTCAAAAAAAAATGTGATGCCTCCCGTGAAAAAATGTGATGCCTCCAAAATTGAATTTTTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

12.79

Weight (kDa)

8.62

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 49
AccIII TCCGGA 1 cut(s) 210
AciI CCGC 1 cut(s) 49
AcsI RAATTY 3 cut(s) 43, 214, 320
AfiI CCNNNNNNNGG 2 cut(s) 106, 133
AgsI TTSAA 3 cut(s) 87, 270, 320
AluBI AGCT 1 cut(s) 206
AluI AGCT 1 cut(s) 206
Aor13HI TCCGGA 1 cut(s) 210
ApoI RAATTY 3 cut(s) 43, 214, 320
BccI CCATC 2 cut(s) 73, 262
BmiI GGNNCC 1 cut(s) 6
BmsI GCATC 3 cut(s) 37, 273, 295
BpuEI CTTGAG 2 cut(s) 76, 122
BsaWI WCCGGW 1 cut(s) 210
Bsc4I CCNNNNNNNGG 2 cut(s) 106, 133
Bse3DI GCAATG 1 cut(s) 23
BseAI TCCGGA 1 cut(s) 210
BseGI GGATG 1 cut(s) 28
BseLI CCNNNNNNNGG 2 cut(s) 106, 133
BseMI GCAATG 1 cut(s) 23
BseRI GAGGAG 1 cut(s) 245
Bsh1236I CGCG 1 cut(s) 49
BsiSI CCGG 1 cut(s) 211
BslI CCNNNNNNNGG 2 cut(s) 106, 133
Bsp13I TCCGGA 1 cut(s) 210
BspACI CCGC 1 cut(s) 49
BspEI TCCGGA 1 cut(s) 210
BspFNI CGCG 1 cut(s) 49
BspLI GGNNCC 1 cut(s) 6
BsrDI GCAATG 1 cut(s) 23
Bst4CI ACNGT 1 cut(s) 199
BstF5I GGATG 1 cut(s) 28
BstFNI CGCG 1 cut(s) 49
BstUI CGCG 1 cut(s) 49
BtsCI GGATG 1 cut(s) 28
CviAII CATG 1 cut(s) 141
CviJI RGCY 3 cut(s) 110, 116, 206
CviKI_1 RGCY 3 cut(s) 110, 116, 206
DraI TTTAAA 1 cut(s) 73
FaeI CATG 1 cut(s) 144
FaiI YATR 4 cut(s) 39, 41, 142, 250
FatI CATG 1 cut(s) 140
FokI GGATG 1 cut(s) 15
HapII CCGG 1 cut(s) 211
Hin1II CATG 1 cut(s) 144
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HinfI GANTC 3 cut(s) 83, 137, 241
HpaII CCGG 1 cut(s) 211
Hpy166II GTNNAC 3 cut(s) 97, 166, 195
Hpy188III TCNNGA 3 cut(s) 32, 55, 211
Hpy8I GTNNAC 3 cut(s) 97, 166, 195
HpyAV CCTTC 1 cut(s) 127
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4V TGCA 1 cut(s) 28
Hsp92II CATG 1 cut(s) 144
Kpn2I TCCGGA 1 cut(s) 210
LmnI GCTCC 1 cut(s) 61
LpnPI CCDG 4 cut(s) 5, 45, 173, 224
LweI GCATC 3 cut(s) 37, 273, 295
MaeIII GTNAC 1 cut(s) 149
MfeI CAATTG 1 cut(s) 154
MluCI AATT 5 cut(s) 43, 154, 214, 315, 320
MlyI GAGTC 1 cut(s) 235
MmeI TCCRAC 2 cut(s) 114, 145
MnlI CCTC 5 cut(s) 51, 97, 223, 297, 319
MroI TCCGGA 1 cut(s) 210
MseI TTAA 2 cut(s) 72, 331
MspI CCGG 1 cut(s) 211
MunI CAATTG 1 cut(s) 154
MvnI CGCG 1 cut(s) 49
NlaIII CATG 1 cut(s) 144
NlaIV GGNNCC 1 cut(s) 6
PfeI GAWTC 2 cut(s) 83, 137
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
PspN4I GGNNCC 1 cut(s) 6
SaqAI TTAA 2 cut(s) 72, 331
SchI GAGTC 1 cut(s) 235
SetI ASST 3 cut(s) 102, 108, 208
SfaNI GCATC 3 cut(s) 37, 273, 295
SmlI CTYRAG 2 cut(s) 55, 101
SmoI CTYRAG 2 cut(s) 55, 101
Sse9I AATT 5 cut(s) 43, 154, 214, 315, 320
SsiI CCGC 1 cut(s) 49
TaaI ACNGT 1 cut(s) 199
TasI AATT 5 cut(s) 43, 154, 214, 315, 320
TfiI GAWTC 2 cut(s) 83, 137
Tru1I TTAA 2 cut(s) 72, 331
Tru9I TTAA 2 cut(s) 72, 331
XapI RAATTY 3 cut(s) 43, 214, 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.