Rh7DG126800

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
10691800 .. 10692111
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG126800.1

Sequence Viewer

Length: 312 bp
ATGGTGCTTCTACTCCTTGTTTTTCTCATACCCTTCATTTTCTTGCTTTTGATGAAGCAAAATGCTAGAGGAAAGTGGTTGCCTTCTGGTCCTAGAAGGCTACCTCTCATAGGGAACCTTCACCATCTTTATGATGATTTAACCCATTCTGTTCTTCAACACCTTTCTAGTCAATATGGGCCAAACATGTTCATGCAATTAGGCTCGAGGCCAACTCTAGTAATCTCCTCAGCCGAAATGGCAAGAGAGGTTTTGAAAACTCATGACCTAGTTTTTCAGGTAGACCAGCCTTGTATGTTGCAAAGACGCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.89

Weight (kDa)

9.85

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 95 1.9e-10 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 282
AfiI CCNNNNNNNGG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 186
AgsI TTSAA 2 cut(s) 158, 256
Ama87I CYCGRG 1 cut(s) 205
AoxI GGCC 2 cut(s) 179, 209
AspS9I GGNCC 2 cut(s) 89, 179
AsuHPI GGTGA 1 cut(s) 113
AvaI CYCGRG 1 cut(s) 205
AvaII GGWCC 1 cut(s) 89
BbvCI CCTCAGC 1 cut(s) 229
BccI CCATC 1 cut(s) 132
BfaI CTAG 5 cut(s) 66, 93, 168, 218, 269
BglI GCCNNNNNGGC 1 cut(s) 239
Bme18I GGWCC 1 cut(s) 89
BmeT110I CYCGRG 1 cut(s) 205
BmgT120I GGNCC 2 cut(s) 89, 179
BmiI GGNNCC 1 cut(s) 116
BplI GAGNNNNNCTC 2 cut(s) 199, 231
Bpu10I CCTNAGC 1 cut(s) 229
Bsc4I CCNNNNNNNGG 1 cut(s) 110
BseLI CCNNNNNNNGG 1 cut(s) 110
BseMII CTCAG 1 cut(s) 243
BseRI GAGGAG 1 cut(s) 217
BshFI GGCC 2 cut(s) 181, 211
BsiHKCI CYCGRG 1 cut(s) 205
BslI CCNNNNNNNGG 1 cut(s) 110
BsnI GGCC 2 cut(s) 181, 211
BsoBI CYCGRG 1 cut(s) 205
BspANI GGCC 2 cut(s) 181, 211
BspCNI CTCAG 1 cut(s) 242
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 116
BstDEI CTNAG 1 cut(s) 229
BstENI CCTNNNNNAGG 1 cut(s) 108
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstNSI RCATGY 1 cut(s) 190
BsuRI GGCC 2 cut(s) 181, 211
CciI TCATGA 1 cut(s) 262
Cfr13I GGNCC 2 cut(s) 89, 179
CviAII CATG 3 cut(s) 187, 193, 263
CviJI RGCY 6 cut(s) 100, 181, 204, 211, 233, 289
CviKI_1 RGCY 6 cut(s) 100, 181, 204, 211, 233, 289
DdeI CTNAG 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 89
Eco88I CYCGRG 1 cut(s) 205
EcoNI CCTNNNNNAGG 1 cut(s) 108
FaeI CATG 3 cut(s) 190, 196, 266
FaiI YATR 8 cut(s) 29, 110, 132, 177, 188, 194, 264, 296
FatI CATG 3 cut(s) 186, 192, 262
FblI GTMKAC 1 cut(s) 282
FspBI CTAG 5 cut(s) 66, 93, 168, 218, 269
HaeIII GGCC 2 cut(s) 181, 211
Hin1II CATG 3 cut(s) 190, 196, 266
HphI GGTGA 1 cut(s) 113
Hpy166II GTNNAC 1 cut(s) 283
Hpy188III TCNNGA 1 cut(s) 263
Hpy8I GTNNAC 1 cut(s) 283
HpyAV CCTTC 4 cut(s) 43, 90, 93, 128
HpyCH4V TGCA 2 cut(s) 196, 301
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 1 cut(s) 229
Hsp92II CATG 3 cut(s) 190, 196, 266
LpnPI CCDG 3 cut(s) 72, 263, 299
MaeI CTAG 5 cut(s) 66, 93, 168, 218, 269
MboII GAAGA 1 cut(s) 146
MluCI AATT 1 cut(s) 197
MnlI CCTC 5 cut(s) 62, 114, 201, 238, 241
MseI TTAA 1 cut(s) 140
MslI CAYNNNNRTG 2 cut(s) 129, 191
MwoI GCNNNNNNNGC 1 cut(s) 239
NlaIII CATG 3 cut(s) 190, 196, 266
NlaIV GGNNCC 1 cut(s) 116
NspI RCATGY 1 cut(s) 190
PaeR7I CTCGAG 1 cut(s) 205
PagI TCATGA 1 cut(s) 262
PciI ACATGT 1 cut(s) 186
PscI ACATGT 1 cut(s) 186
PspN4I GGNNCC 1 cut(s) 116
PspPI GGNCC 2 cut(s) 89, 179
PspXI VCTCGAGB 1 cut(s) 205
RseI CAYNNNNRTG 2 cut(s) 129, 191
SaqAI TTAA 1 cut(s) 140
Sau96I GGNCC 2 cut(s) 89, 179
SetI ASST 6 cut(s) 106, 120, 165, 252, 270, 282
Sfr274I CTCGAG 1 cut(s) 205
SinI GGWCC 1 cut(s) 89
SlaI CTCGAG 1 cut(s) 205
SmiMI CAYNNNNRTG 2 cut(s) 129, 191
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
Sse9I AATT 1 cut(s) 197
SspMI CTAG 5 cut(s) 66, 93, 168, 218, 269
TaqI TCGA 1 cut(s) 206
TasI AATT 1 cut(s) 197
Tru1I TTAA 1 cut(s) 140
Tru9I TTAA 1 cut(s) 140
TspDTI ATGAA 3 cut(s) 25, 68, 181
VpaK11BI GGWCC 1 cut(s) 89
XagI CCTNNNNNAGG 1 cut(s) 108
XceI RCATGY 1 cut(s) 190
XhoI CTCGAG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 282
XspI CTAG 5 cut(s) 66, 93, 168, 218, 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.