Rh7CG127800

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001697
Physical Location & Seq
Reverse (-)
9949617 .. 9964550
14934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG127800.1

Sequence Viewer

Length: 1053 bp
ATGACTAGAGAGGTTTTCAAAACTCATGACCTCATTTTTTCAGGTAGACCAGATTTCTTGTATGTTGCAAAGAGGCTTAGCTATGACTCCAGTGTATCATTTTCTCCCATTGGTAAGTATTGGAGGGAGGTTAGAAAGATTGTGATCTTGGAACTACTTAGTGCAAAGAGGATTCAAATGTTTCGTTCTGTGAGAGACGAAGAGGTTGGACATATGATTGATGACATAGCTCATACTTCTAATGATCTCATCAATCTCAATGCACTGACACATTTCTTATCCAACAGTGTCTTGTGCCGCTCGGCTTTTGGCAAAAAGTATGATGATGCTGGAGGTGTTATTAGCAAGAACAGAATTTTTGAATTGCTTGAAGAGGCAATGAACTTGTTGGGAGGGTTCTGCATATCGGATTTTCTGCCATGGATGGGTTGGCTAAACAAGTTCAATGGTCTTGAAAAAAGGGTAGACAAGTGTTTTAAAGGGTTGGACAGTTTATATGACAAAGTGATTGAGGAACACCTTGACCCAAAAAGGCCTACTCCGGAGCATGAAGATCTTGTCGATGTGCTACTTCGAGTTCAGAAAGATCCAAGTCAAGCAATAGCACTTACTAACGACCAAATCAAGGGTGTCATCACTCAAAATGCTAGAGGAAAGTGGTTGCCTTATGGTCCTAGAAGGCTACCTCTCATAGGGAACCTTCACCATCTTTATGATGATTTAACCCATTCTGTTCTTCAACACCTTTCTAGTCAATATGGGCCAATCATGTTCATGCAATTAGGCTCGAGGCCTACTCTAGTAATCTCCTCAGCCGAAATGGCAAGAGAGGTTTTGAAAACTCATGACCTAGTTTTTCAGAAGTATGATGGGGAAGGTGAAACTGGCATGAGCAGAAATATTCAGGAGTTGCTTAAAGAGTCGATGGTCCTTTTGGGAGGACTCTATGTATCGGATTTTCTACCATGGATCAGCTGGATAAACAAGTTCAGTGGTCTTGAACAAAGAGTAGACAAGTGTTTAAGAACTTGGACAATCTCTATAACAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

350

Amino Acids

40.16

Weight (kDa)

7.18

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 212 9.5e-13 Cytochrome P450
p450 PF00067 222 - 289 3.8e-10 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 300
AccI GTMKAC 3 cut(s) 46, 465, 1011
AccIII TCCGGA 1 cut(s) 541
AciI CCGC 1 cut(s) 298
AclWI GGATC 2 cut(s) 581, 977
AcsI RAATTY 1 cut(s) 354
AfiI CCNNNNNNNGG 3 cut(s) 425, 625, 692
AgsI TTSAA 9 cut(s) 19, 176, 362, 371, 445, 455, 740, 838, 1001
AluBI AGCT 3 cut(s) 81, 230, 975
AluI AGCT 3 cut(s) 81, 230, 975
Alw26I GTCTC 1 cut(s) 189
AlwI GGATC 2 cut(s) 581, 977
Ama87I CYCGRG 1 cut(s) 787
Aor13HI TCCGGA 1 cut(s) 541
AoxI GGCC 3 cut(s) 533, 761, 791
ApoI RAATTY 1 cut(s) 354
AspS9I GGNCC 3 cut(s) 671, 761, 928
AsuHPI GGTGA 2 cut(s) 695, 890
AvaI CYCGRG 1 cut(s) 787
AvaII GGWCC 2 cut(s) 671, 928
BbvCI CCTCAGC 1 cut(s) 811
BccI CCATC 4 cut(s) 418, 714, 863, 919
BcoDI GTCTC 1 cut(s) 189
BfaI CTAG 6 cut(s) 6, 648, 675, 750, 800, 851
BglI GCCNNNNNGGC 1 cut(s) 821
BglII AGATCT 1 cut(s) 553
BisI GCNGC 1 cut(s) 298
BlpI GCTNAGC 1 cut(s) 77
BlsI GCNGC 1 cut(s) 299
Bme18I GGWCC 2 cut(s) 671, 928
BmeT110I CYCGRG 1 cut(s) 787
BmgT120I GGNCC 3 cut(s) 671, 761, 928
BmiI GGNNCC 1 cut(s) 698
BmsI GCATC 1 cut(s) 316
BplI GAGNNNNNCTC 2 cut(s) 781, 813
BpmI CTGGAG 2 cut(s) 73, 351
Bpu10I CCTNAGC 1 cut(s) 811
Bpu1102I GCTNAGC 1 cut(s) 77
BsaBI GATNNNNATC 1 cut(s) 143
BsaJI CCNNGG 2 cut(s) 419, 965
BsaWI WCCGGW 1 cut(s) 541
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 625, 692
Bse1I ACTGG 2 cut(s) 90, 889
Bse3DI GCAATG 1 cut(s) 384
Bse8I GATNNNNATC 1 cut(s) 143
BseAI TCCGGA 1 cut(s) 541
BseDI CCNNGG 2 cut(s) 419, 965
BseGI GGATG 1 cut(s) 429
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 3 cut(s) 425, 625, 692
BseMI GCAATG 1 cut(s) 384
BseMII CTCAG 1 cut(s) 825
BseNI ACTGG 2 cut(s) 90, 889
BseRI GAGGAG 1 cut(s) 799
BshFI GGCC 3 cut(s) 535, 763, 793
BsiHKCI CYCGRG 1 cut(s) 787
BsiSI CCGG 1 cut(s) 542
BslI CCNNNNNNNGG 3 cut(s) 425, 625, 692
BsmAI GTCTC 1 cut(s) 189
BsmBI CGTCTC 1 cut(s) 189
BsnI GGCC 3 cut(s) 535, 763, 793
BsoBI CYCGRG 1 cut(s) 787
Bsp13I TCCGGA 1 cut(s) 541
Bsp143I GATC 5 cut(s) 144, 244, 553, 586, 969
Bsp1720I GCTNAGC 1 cut(s) 77
Bsp19I CCATGG 2 cut(s) 419, 965
BspACI CCGC 1 cut(s) 298
BspANI GGCC 3 cut(s) 535, 763, 793
BspCNI CTCAG 1 cut(s) 824
BspEI TCCGGA 1 cut(s) 541
BspHI TCATGA 2 cut(s) 25, 844
BspLI GGNNCC 1 cut(s) 698
BspPI GGATC 2 cut(s) 581, 977
BsrBI CCGCTC 1 cut(s) 300
BsrDI GCAATG 1 cut(s) 384
BsrI ACTGG 2 cut(s) 90, 889
BssECI CCNNGG 2 cut(s) 419, 965
BssMI GATC 5 cut(s) 144, 244, 553, 586, 969
BssT1I CCWWGG 2 cut(s) 419, 965
Bst4CI ACNGT 2 cut(s) 287, 491
Bst6I CTCTTC 2 cut(s) 195, 366
BstDEI CTNAG 3 cut(s) 77, 158, 811
BstDSI CCRYGG 2 cut(s) 419, 965
BstENI CCTNNNNNAGG 1 cut(s) 690
BstF5I GGATG 1 cut(s) 429
BstKTI GATC 5 cut(s) 147, 247, 556, 589, 972
BstMAI GTCTC 1 cut(s) 189
BstMBI GATC 5 cut(s) 144, 244, 553, 586, 969
BstMWI GCNNNNNNNGC 1 cut(s) 821
BstX2I RGATCY 2 cut(s) 553, 586
BstYI RGATCY 2 cut(s) 553, 586
BsuRI GGCC 3 cut(s) 535, 763, 793
BtgI CCRYGG 2 cut(s) 419, 965
BtsCI GGATG 1 cut(s) 429
BtsIMutI CAGTG 4 cut(s) 97, 263, 292, 997
CciI TCATGA 2 cut(s) 25, 844
Cfr13I GGNCC 3 cut(s) 671, 761, 928
CspCI CAANNNNNGTGG 2 cut(s) 973, 1008
CviAII CATG 8 cut(s) 26, 420, 548, 769, 775, 845, 889, 966
DdeI CTNAG 3 cut(s) 77, 158, 811
DpnI GATC 5 cut(s) 146, 246, 555, 588, 971
DpnII GATC 5 cut(s) 144, 244, 553, 586, 969
DraI TTTAAA 1 cut(s) 478
Eam1104I CTCTTC 2 cut(s) 195, 366
EarI CTCTTC 2 cut(s) 195, 366
Eco130I CCWWGG 2 cut(s) 419, 965
Eco147I AGGCCT 2 cut(s) 535, 793
Eco47I GGWCC 2 cut(s) 671, 928
Eco88I CYCGRG 1 cut(s) 787
EcoNI CCTNNNNNAGG 1 cut(s) 690
EcoT14I CCWWGG 2 cut(s) 419, 965
ErhI CCWWGG 2 cut(s) 419, 965
Esp3I CGTCTC 1 cut(s) 189
FaeI CATG 8 cut(s) 29, 423, 551, 772, 778, 848, 892, 969
FatI CATG 8 cut(s) 25, 419, 547, 768, 774, 844, 888, 965
FauNDI CATATG 1 cut(s) 213
FblI GTMKAC 3 cut(s) 46, 465, 1011
Fnu4HI GCNGC 1 cut(s) 298
FokI GGATG 1 cut(s) 436
Fsp4HI GCNGC 1 cut(s) 298
FspBI CTAG 6 cut(s) 6, 648, 675, 750, 800, 851
GluI GCNGC 1 cut(s) 298
GsuI CTGGAG 2 cut(s) 73, 351
HaeIII GGCC 3 cut(s) 535, 763, 793
HapII CCGG 1 cut(s) 542
Hin1II CATG 8 cut(s) 29, 423, 551, 772, 778, 848, 892, 969
HinfI GANTC 4 cut(s) 86, 172, 920, 942
HpaII CCGG 1 cut(s) 542
HphI GGTGA 2 cut(s) 695, 890
Hpy166II GTNNAC 3 cut(s) 47, 466, 1012
Hpy188I TCNGA 4 cut(s) 409, 582, 861, 955
Hpy188III TCNNGA 6 cut(s) 26, 452, 542, 845, 905, 998
Hpy8I GTNNAC 3 cut(s) 47, 466, 1012
HpyAV CCTTC 3 cut(s) 672, 710, 869
HpyCH4III ACNGT 2 cut(s) 287, 491
HpyCH4V TGCA 5 cut(s) 68, 164, 263, 402, 778
HpyF10VI GCNNNNNNNGC 1 cut(s) 821
HpyF3I CTNAG 3 cut(s) 77, 158, 811
Hsp92II CATG 8 cut(s) 29, 423, 551, 772, 778, 848, 892, 969
Kpn2I TCCGGA 1 cut(s) 541
Kzo9I GATC 5 cut(s) 144, 244, 553, 586, 969
LmnI GCTCC 1 cut(s) 544
LpnPI CCDG 8 cut(s) 27, 63, 103, 315, 555, 870, 890, 961
LweI GCATC 1 cut(s) 316
MaeI CTAG 6 cut(s) 6, 648, 675, 750, 800, 851
MalI GATC 5 cut(s) 146, 246, 555, 588, 971
MbiI CCGCTC 1 cut(s) 300
MboI GATC 5 cut(s) 144, 244, 553, 586, 969
MboII GAAGA 4 cut(s) 212, 383, 563, 728
MflI RGATCY 2 cut(s) 553, 586
MluCI AATT 3 cut(s) 354, 362, 779
MlyI GAGTC 3 cut(s) 80, 929, 936
MmeI TCCRAC 3 cut(s) 187, 306, 465
MroI TCCGGA 1 cut(s) 541
MseI TTAA 4 cut(s) 477, 722, 915, 1022
MslI CAYNNNNRTG 2 cut(s) 711, 773
MspA1I CMGCKG 1 cut(s) 975
MspI CCGG 1 cut(s) 542
MwoI GCNNNNNNNGC 1 cut(s) 821
NcoI CCATGG 2 cut(s) 419, 965
NdeI CATATG 1 cut(s) 213
NdeII GATC 5 cut(s) 144, 244, 553, 586, 969
NlaIII CATG 8 cut(s) 29, 423, 551, 772, 778, 848, 892, 969
NlaIV GGNNCC 1 cut(s) 698
NmeAIII GCCGAG 1 cut(s) 281
PaeR7I CTCGAG 1 cut(s) 787
PagI TCATGA 2 cut(s) 25, 844
PceI AGGCCT 2 cut(s) 535, 793
PfeI GAWTC 1 cut(s) 172
PkrI GCNGC 1 cut(s) 299
PleI GAGTC 3 cut(s) 80, 928, 936
PpsI GAGTC 3 cut(s) 80, 928, 936
PspN4I GGNNCC 1 cut(s) 698
PspPI GGNCC 3 cut(s) 671, 761, 928
PspXI VCTCGAGB 1 cut(s) 787
PsuI RGATCY 2 cut(s) 553, 586
PvuII CAGCTG 1 cut(s) 975
RseI CAYNNNNRTG 2 cut(s) 711, 773
SaqAI TTAA 4 cut(s) 477, 722, 915, 1022
SatI GCNGC 1 cut(s) 298
Sau3AI GATC 5 cut(s) 144, 244, 553, 586, 969
Sau96I GGNCC 3 cut(s) 671, 761, 928
SchI GAGTC 3 cut(s) 80, 929, 936
SfaNI GCATC 1 cut(s) 316
Sfr274I CTCGAG 1 cut(s) 787
SinI GGWCC 2 cut(s) 671, 928
SlaI CTCGAG 1 cut(s) 787
SmiMI CAYNNNNRTG 2 cut(s) 711, 773
SmlI CTYRAG 1 cut(s) 787
SmoI CTYRAG 1 cut(s) 787
Sse9I AATT 3 cut(s) 354, 362, 779
SseBI AGGCCT 2 cut(s) 535, 793
SsiI CCGC 1 cut(s) 298
SspI AATATT 1 cut(s) 901
SspMI CTAG 6 cut(s) 6, 648, 675, 750, 800, 851
StuI AGGCCT 2 cut(s) 535, 793
StyI CCWWGG 2 cut(s) 419, 965
TaaI ACNGT 2 cut(s) 287, 491
TaqI TCGA 4 cut(s) 561, 574, 788, 923
TasI AATT 3 cut(s) 354, 362, 779
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 1 cut(s) 172
Tru1I TTAA 4 cut(s) 477, 722, 915, 1022
Tru9I TTAA 4 cut(s) 477, 722, 915, 1022
TscAI CASTG 4 cut(s) 97, 270, 292, 997
TspDTI ATGAA 3 cut(s) 395, 564, 763
TspRI CASTG 4 cut(s) 97, 270, 292, 997
VpaK11BI GGWCC 2 cut(s) 671, 928
XagI CCTNNNNNAGG 1 cut(s) 690
XapI RAATTY 1 cut(s) 354
XcmI CCANNNNNNNNNTGG 2 cut(s) 426, 972
XhoI CTCGAG 1 cut(s) 787
XmiI GTMKAC 3 cut(s) 46, 465, 1011
XspI CTAG 6 cut(s) 6, 648, 675, 750, 800, 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.