RchiOBHm_Chr3g0483831

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
30156156 .. 30156626
471 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44856

Sequence Viewer

Length: 357 bp
ATGGCAAGAGAGGTTTTGAAAACTCATGACCTATTTTTTTCAGGCAGACCAGCCTTGTATGTTGCAAAGAAGCTTAGCTATGGATGTGTCAATCTATCGTTTGCTCCTTTTGGTGAGTATTGGAGAGAGGTAAGGAAGTTTGTGATCTTGGAACTACTTGGTCCAAAGAAGGTCCAAATGTTTCAGTCTGTGAGGGATGAAGAGTATGATGGGGAAGGTGAAATTGGCATGAGCAGAAGTCATGAGTTGCTTAAAGAGTCGGTGGTCCTTTTGGGAGGACTCTATGTATCAGATTTTCTACCATGGATCAGCTGGATAAACAAGTTCAGTGGTCTTGAACAAAGAGTAGACAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.65

Weight (kDa)

6.74

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 348
AclWI GGATC 1 cut(s) 314
AgsI TTSAA 2 cut(s) 19, 338
AjuI GAANNNNNNNTTGG 2 cut(s) 207, 239
AluBI AGCT 3 cut(s) 73, 78, 312
AluI AGCT 3 cut(s) 73, 78, 312
AlwI GGATC 1 cut(s) 314
AspS9I GGNCC 3 cut(s) 161, 172, 265
AsuHPI GGTGA 2 cut(s) 125, 230
AvaII GGWCC 3 cut(s) 161, 172, 265
BccI CCATC 1 cut(s) 203
BlpI GCTNAGC 1 cut(s) 74
Bme18I GGWCC 3 cut(s) 161, 172, 265
BmgT120I GGNCC 3 cut(s) 161, 172, 265
Bpu1102I GCTNAGC 1 cut(s) 74
BsaJI CCNNGG 1 cut(s) 302
BseDI CCNNGG 1 cut(s) 302
BseGI GGATG 2 cut(s) 89, 202
Bsp143I GATC 2 cut(s) 144, 306
Bsp1720I GCTNAGC 1 cut(s) 74
Bsp19I CCATGG 1 cut(s) 302
BspHI TCATGA 2 cut(s) 25, 241
BspPI GGATC 1 cut(s) 314
BssECI CCNNGG 1 cut(s) 302
BssMI GATC 2 cut(s) 144, 306
BssT1I CCWWGG 1 cut(s) 302
Bst6I CTCTTC 1 cut(s) 195
BstDEI CTNAG 1 cut(s) 74
BstDSI CCRYGG 1 cut(s) 302
BstF5I GGATG 2 cut(s) 89, 202
BstKTI GATC 2 cut(s) 147, 309
BstMBI GATC 2 cut(s) 144, 306
BtgI CCRYGG 1 cut(s) 302
BtsCI GGATG 2 cut(s) 89, 202
BtsIMutI CAGTG 1 cut(s) 334
CciI TCATGA 2 cut(s) 25, 241
Cfr13I GGNCC 3 cut(s) 161, 172, 265
CspCI CAANNNNNGTGG 2 cut(s) 310, 345
CviAII CATG 4 cut(s) 26, 229, 242, 303
CviJI RGCY 4 cut(s) 53, 73, 78, 312
CviKI_1 RGCY 4 cut(s) 53, 73, 78, 312
DdeI CTNAG 1 cut(s) 74
DpnI GATC 2 cut(s) 146, 308
DpnII GATC 2 cut(s) 144, 306
Eam1104I CTCTTC 1 cut(s) 195
EarI CTCTTC 1 cut(s) 195
Eco130I CCWWGG 1 cut(s) 302
Eco47I GGWCC 3 cut(s) 161, 172, 265
EcoT14I CCWWGG 1 cut(s) 302
ErhI CCWWGG 1 cut(s) 302
FaeI CATG 4 cut(s) 29, 232, 245, 306
FaiI YATR 8 cut(s) 27, 60, 81, 207, 230, 243, 285, 304
FatI CATG 4 cut(s) 25, 228, 241, 302
FblI GTMKAC 1 cut(s) 348
FokI GGATG 2 cut(s) 96, 209
Hin1II CATG 4 cut(s) 29, 232, 245, 306
HindIII AAGCTT 1 cut(s) 71
HinfI GANTC 2 cut(s) 257, 279
HphI GGTGA 2 cut(s) 125, 230
Hpy166II GTNNAC 1 cut(s) 349
Hpy188I TCNGA 1 cut(s) 292
Hpy188III TCNNGA 3 cut(s) 26, 242, 335
Hpy8I GTNNAC 1 cut(s) 349
HpyAV CCTTC 2 cut(s) 163, 209
HpyCH4V TGCA 1 cut(s) 65
HpyF3I CTNAG 1 cut(s) 74
Hsp92II CATG 4 cut(s) 29, 232, 245, 306
Kzo9I GATC 2 cut(s) 144, 306
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 3 cut(s) 27, 63, 298
MalI GATC 2 cut(s) 146, 308
MboI GATC 2 cut(s) 144, 306
MboII GAAGA 1 cut(s) 212
MluCI AATT 1 cut(s) 222
MlyI GAGTC 2 cut(s) 266, 273
MnlI CCTC 4 cut(s) 4, 121, 186, 269
MseI TTAA 1 cut(s) 252
MspA1I CMGCKG 1 cut(s) 312
NcoI CCATGG 1 cut(s) 302
NdeII GATC 2 cut(s) 144, 306
NlaIII CATG 4 cut(s) 29, 232, 245, 306
PagI TCATGA 2 cut(s) 25, 241
PleI GAGTC 2 cut(s) 265, 273
PpsI GAGTC 2 cut(s) 265, 273
PspPI GGNCC 3 cut(s) 161, 172, 265
PvuII CAGCTG 1 cut(s) 312
SaqAI TTAA 1 cut(s) 252
Sau3AI GATC 2 cut(s) 144, 306
Sau96I GGNCC 3 cut(s) 161, 172, 265
SchI GAGTC 2 cut(s) 266, 273
SetI ASST 8 cut(s) 15, 33, 75, 80, 132, 174, 220, 314
SinI GGWCC 3 cut(s) 161, 172, 265
Sse9I AATT 1 cut(s) 222
StyI CCWWGG 1 cut(s) 302
TasI AATT 1 cut(s) 222
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TscAI CASTG 1 cut(s) 334
TspDTI ATGAA 1 cut(s) 213
TspRI CASTG 1 cut(s) 334
VpaK11BI GGWCC 3 cut(s) 161, 172, 265
XcmI CCANNNNNNNNNTGG 1 cut(s) 309
XmiI GTMKAC 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.