Rmu_sc0002053.1_g000004

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002053.1
Physical Location & Seq
Reverse (-)
15489 .. 20667
5179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002053.1_g000004.1.cds

Sequence Viewer

Length: 1203 bp
atggtgagcttcgtctccggaagatggaagccatcaccgaatcttaggtttcttcttcaatccaagagaaatccaaaggaggagaaattatgcagtttcgcggctctcctggtactgccaaacccaaagatgacgaggctgcttgagatagagacgagcccagttgctggaagcatgtggacgtggccgagaccagccttgtatgttgcaaagaagcttagctatggatgtgtcaatctatcgtttgctccttacggtgagtattggagggaggtaaggaagtttgtgatcttggaactacttggtccaaagagggtccaaatgtttcagtctatgagggatgaagaggttggagttatgattgactcaatagctcataagtgttatggtattgtcaatctcagtgaagtgacagttaccttggccaacaatgttttgtgtcgctgcacttttggtaacaagtgtgatggggaaggtgaaattggcatgagcagaagtcatgagttgcttaaagagtcggtggtccttttgggaggactctatgtatcagattttctactatggatcagctggataaacaagttcaatggtcttgaacaaagagtacacaacttttgtggcatagtgggccctggtcttgacgtaaacaacggattttgggttggcgctggggcacctgcctttgcccggattagcctttgttccagttgctgcactctttctaaaattagggctgttgcattatcggcgggtcctgcctggaggttctgctgtgccagctcccgcccgagcacaggtggatttctcttggttctggccctggtagcggagcgtttggtgagcggttgcgactctgattcttgctctattagtcgtggtggaggtggacccattcccaacatctctggtgggttcagcagtatctgcatctgcagggttggtgcctgtaccaatcttcctgtgttgggtcgactacgcctcgtgctctatgattgctcgctttgcgcctggttagcgtttgcttctaacgccctctttagttcgtcgaacctggacatcagcgtggccacatgtttctgggcctcgaccttctccctgtgctcctgttcgcgctctctgtttgctttgtggagattcgccaatgccagctcatacataacggtgaggtcctggcccggaggtcggcgactgctgcatggctga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

400

Amino Acids

43.67

Weight (kDa)

9.06

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 685
Acc36I ACCTGC 1 cut(s) 685
AccB1I GGYRCC 2 cut(s) 673, 941
AccB7I CCANNNNNTGG 1 cut(s) 167
AccBSI CCGCTC 1 cut(s) 843
AccI GTMKAC 1 cut(s) 970
AccII CGCG 2 cut(s) 101, 1111
AccIII TCCGGA 1 cut(s) 17
AciI CCGC 5 cut(s) 101, 749, 784, 827, 843
AclWI GGATC 1 cut(s) 572
AcoI YGGCCR 3 cut(s) 185, 423, 1065
AfaI GTAC 3 cut(s) 114, 606, 949
AfiI CCNNNNNNNGG 7 cut(s) 24, 167, 687, 794, 826, 965, 1182
AflIII ACRYGT 1 cut(s) 1070
AgsI TTSAA 3 cut(s) 59, 586, 596
AjiI CACGTC 1 cut(s) 183
AjnI CCWGG 7 cut(s) 108, 631, 758, 819, 1007, 1050, 1169
AjuI GAANNNNNNNTTGG 2 cut(s) 465, 497
AluBI AGCT 7 cut(s) 9, 217, 222, 374, 570, 780, 1149
AluI AGCT 7 cut(s) 9, 217, 222, 374, 570, 780, 1149
Alw21I GWGCWC 3 cut(s) 794, 987, 1103
Alw26I GTCTC 3 cut(s) 19, 146, 184
AlwI GGATC 1 cut(s) 572
AlwNI CAGNNNCTG 3 cut(s) 167, 711, 924
Ama87I CYCGRG 1 cut(s) 787
Aor13HI TCCGGA 1 cut(s) 17
AoxI GGCC 7 cut(s) 185, 423, 628, 816, 1065, 1080, 1172
ApaI GGGCCC 1 cut(s) 632
ApeKI GCWGC 4 cut(s) 139, 444, 711, 1192
AspLEI GCGC 3 cut(s) 668, 1007, 1113
AsuC2I CCSGG 2 cut(s) 688, 1176
AsuHPI GGTGA 6 cut(s) 16, 27, 269, 488, 850, 1174
AvaI CYCGRG 1 cut(s) 787
AvaII GGWCC 6 cut(s) 305, 316, 523, 752, 887, 1167
BaeGI GKGCMC 2 cut(s) 632, 676
BalI TGGCCA 2 cut(s) 425, 1067
BanI GGYRCC 2 cut(s) 673, 941
BanII GRGCYC 2 cut(s) 161, 632
BauI CACGAG 1 cut(s) 980
Bbv12I GWGCWC 3 cut(s) 794, 987, 1103
BbvI GCAGC 4 cut(s) 126, 431, 698, 1179
BccI CCATC 3 cut(s) 18, 40, 461
BciT130I CCWGG 7 cut(s) 110, 633, 760, 821, 1009, 1052, 1171
BcnI CCSGG 2 cut(s) 688, 1176
BcoDI GTCTC 3 cut(s) 19, 146, 184
BfmI CTRYAG 1 cut(s) 931
BfoI RGCGCY 1 cut(s) 669
BfuAI ACCTGC 1 cut(s) 685
BisI GCNGC 5 cut(s) 102, 140, 445, 712, 1193
BlpI GCTNAGC 1 cut(s) 218
BlsI GCNGC 5 cut(s) 103, 141, 446, 713, 1194
Bme1390I CCNGG 9 cut(s) 110, 633, 688, 760, 821, 1009, 1052, 1171, 1176
Bme18I GGWCC 6 cut(s) 305, 316, 523, 752, 887, 1167
BmeT110I CYCGRG 1 cut(s) 787
BmgBI CACGTC 1 cut(s) 183
BmiI GGNNCC 6 cut(s) 317, 630, 675, 753, 889, 943
BmrFI CCNGG 9 cut(s) 110, 633, 688, 760, 821, 1009, 1052, 1171, 1176
BmrI ACTGGG 1 cut(s) 155
BmsI GCATC 1 cut(s) 936
BmuI ACTGGG 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 781
Bpu1102I GCTNAGC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 164
BpuMI CCSGG 2 cut(s) 688, 1176
BsaI GGTCTC 1 cut(s) 184
BsaJI CCNNGG 3 cut(s) 420, 631, 819
BsaWI WCCGGW 1 cut(s) 17
Bsc4I CCNNNNNNNGG 7 cut(s) 24, 167, 687, 794, 826, 965, 1182
Bse1I ACTGG 2 cut(s) 161, 705
BseAI TCCGGA 1 cut(s) 17
BseBI CCWGG 7 cut(s) 110, 633, 760, 821, 1009, 1052, 1171
BseDI CCNNGG 3 cut(s) 420, 631, 819
BseGI GGATG 2 cut(s) 233, 346
BseLI CCNNNNNNNGG 7 cut(s) 24, 167, 687, 794, 826, 965, 1182
BseMII CTCAG 1 cut(s) 415
BseNI ACTGG 2 cut(s) 161, 705
BseRI GAGGAG 1 cut(s) 95
BseSI GKGCMC 2 cut(s) 632, 676
BseXI GCAGC 4 cut(s) 126, 431, 698, 1179
BseYI CCCAGC 1 cut(s) 668
BsgI GTGCAG 2 cut(s) 430, 697
Bsh1236I CGCG 2 cut(s) 101, 1111
BshFI GGCC 7 cut(s) 187, 425, 630, 818, 1067, 1082, 1174
BshNI GGYRCC 2 cut(s) 673, 941
BsiHKAI GWGCWC 3 cut(s) 794, 987, 1103
BsiHKCI CYCGRG 1 cut(s) 787
BsiSI CCGG 3 cut(s) 18, 688, 1176
BslI CCNNNNNNNGG 7 cut(s) 24, 167, 687, 794, 826, 965, 1182
BsmAI GTCTC 3 cut(s) 19, 146, 184
BsmBI CGTCTC 2 cut(s) 19, 146
BsnI GGCC 7 cut(s) 187, 425, 630, 818, 1067, 1082, 1174
Bso31I GGTCTC 1 cut(s) 184
BsoBI CYCGRG 1 cut(s) 787
Bsp120I GGGCCC 1 cut(s) 628
Bsp1286I GDGCHC 6 cut(s) 161, 632, 676, 794, 987, 1103
Bsp13I TCCGGA 1 cut(s) 17
Bsp143I GATC 2 cut(s) 288, 564
Bsp1720I GCTNAGC 1 cut(s) 218
BspACI CCGC 5 cut(s) 101, 749, 784, 827, 843
BspANI GGCC 7 cut(s) 187, 425, 630, 818, 1067, 1082, 1174
BspCNI CTCAG 1 cut(s) 414
BspEI TCCGGA 1 cut(s) 17
BspFNI CGCG 2 cut(s) 101, 1111
BspHI TCATGA 1 cut(s) 499
BspLI GGNNCC 6 cut(s) 317, 630, 675, 753, 889, 943
BspMAI CTGCAG 1 cut(s) 935
BspMI ACCTGC 1 cut(s) 685
BspPI GGATC 1 cut(s) 572
BspT107I GGYRCC 2 cut(s) 673, 941
BspTNI GGTCTC 1 cut(s) 184
BsrBI CCGCTC 1 cut(s) 843
BsrI ACTGG 2 cut(s) 161, 705
BssECI CCNNGG 3 cut(s) 420, 631, 819
BssMI GATC 2 cut(s) 288, 564
BssSI CACGAG 1 cut(s) 980
BssT1I CCWWGG 1 cut(s) 420
Bst2BI CACGAG 1 cut(s) 980
Bst2UI CCWGG 7 cut(s) 110, 633, 760, 821, 1009, 1052, 1171
Bst4CI ACNGT 3 cut(s) 257, 415, 1162
Bst6I CTCTTC 1 cut(s) 339
BstAPI GCANNNNNTGC 1 cut(s) 924
BstC8I GCNNGC 3 cut(s) 778, 998, 1147
BstDEI CTNAG 3 cut(s) 44, 218, 401
BstF5I GGATG 2 cut(s) 233, 346
BstFNI CGCG 2 cut(s) 101, 1111
BstH2I RGCGCY 1 cut(s) 669
BstHHI GCGC 3 cut(s) 668, 1007, 1113
BstKTI GATC 2 cut(s) 291, 567
BstMAI GTCTC 3 cut(s) 19, 146, 184
BstMBI GATC 2 cut(s) 288, 564
BstNI CCWGG 7 cut(s) 110, 633, 760, 821, 1009, 1052, 1171
BstNSI RCATGY 2 cut(s) 178, 1074
BstSCI CCNGG 9 cut(s) 108, 631, 686, 758, 819, 1007, 1050, 1169, 1174
BstSFI CTRYAG 1 cut(s) 931
BstSLI GKGCMC 2 cut(s) 632, 676
BstUI CGCG 2 cut(s) 101, 1111
BstV1I GCAGC 4 cut(s) 126, 431, 698, 1179
BsuRI GGCC 7 cut(s) 187, 425, 630, 818, 1067, 1082, 1174
BtrI CACGTC 1 cut(s) 183
BtsCI GGATG 2 cut(s) 233, 346
BtsIMutI CAGTG 1 cut(s) 409
BveI ACCTGC 1 cut(s) 685
Cac8I GCNNGC 3 cut(s) 778, 998, 1147
CaiI CAGNNNCTG 3 cut(s) 167, 711, 924
CciI TCATGA 1 cut(s) 499
CfoI GCGC 3 cut(s) 668, 1007, 1113
Csp6I GTAC 3 cut(s) 113, 605, 948
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviAII CATG 5 cut(s) 175, 487, 500, 1071, 1196
CviQI GTAC 3 cut(s) 113, 605, 948
DdeI CTNAG 3 cut(s) 44, 218, 401
DpnI GATC 2 cut(s) 290, 566
DpnII GATC 2 cut(s) 288, 564
EaeI YGGCCR 3 cut(s) 185, 423, 1065
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
Eco130I CCWWGG 1 cut(s) 420
Eco24I GRGCYC 2 cut(s) 161, 632
Eco31I GGTCTC 1 cut(s) 184
Eco47I GGWCC 6 cut(s) 305, 316, 523, 752, 887, 1167
Eco88I CYCGRG 1 cut(s) 787
EcoO109I RGGNCCY 3 cut(s) 629, 752, 1167
EcoRII CCWGG 7 cut(s) 108, 631, 758, 819, 1007, 1050, 1169
EcoT14I CCWWGG 1 cut(s) 420
EcoT38I GRGCYC 2 cut(s) 161, 632
ErhI CCWWGG 1 cut(s) 420
Esp3I CGTCTC 2 cut(s) 19, 146
FaeI CATG 5 cut(s) 178, 490, 503, 1074, 1199
FatI CATG 5 cut(s) 174, 486, 499, 1070, 1195
FauI CCCGC 2 cut(s) 742, 791
FblI GTMKAC 1 cut(s) 970
Fnu4HI GCNGC 5 cut(s) 102, 140, 445, 712, 1193
FokI GGATG 2 cut(s) 240, 353
FriOI GRGCYC 2 cut(s) 161, 632
Fsp4HI GCNGC 5 cut(s) 102, 140, 445, 712, 1193
GlaI GCGC 3 cut(s) 667, 1006, 1112
GluI GCNGC 5 cut(s) 102, 140, 445, 712, 1193
GsaI CCCAGC 1 cut(s) 672
GsuI CTGGAG 1 cut(s) 781
HaeII RGCGCY 1 cut(s) 669
HaeIII GGCC 7 cut(s) 187, 425, 630, 818, 1067, 1082, 1174
HapII CCGG 3 cut(s) 18, 688, 1176
HhaI GCGC 3 cut(s) 668, 1007, 1113
Hin1II CATG 5 cut(s) 178, 490, 503, 1074, 1199
Hin6I GCGC 3 cut(s) 666, 1005, 1111
HinP1I GCGC 3 cut(s) 666, 1005, 1111
HincII GTYRAC 1 cut(s) 971
HindII GTYRAC 1 cut(s) 971
HindIII AAGCTT 1 cut(s) 215
HinfI GANTC 7 cut(s) 40, 365, 515, 537, 851, 857, 1134
HpaII CCGG 3 cut(s) 18, 688, 1176
HphI GGTGA 6 cut(s) 16, 27, 269, 488, 850, 1174
Hpy166II GTNNAC 5 cut(s) 180, 607, 646, 887, 971
Hpy188I TCNGA 2 cut(s) 550, 856
Hpy188III TCNNGA 4 cut(s) 18, 500, 593, 638
Hpy8I GTNNAC 5 cut(s) 180, 607, 646, 887, 971
Hpy99I CGWCG 1 cut(s) 1048
HpyAV CCTTC 2 cut(s) 467, 1099
HpyCH4III ACNGT 3 cut(s) 257, 415, 1162
HpyCH4IV ACGT 2 cut(s) 182, 642
HpyCH4V TGCA 8 cut(s) 93, 209, 447, 714, 740, 927, 933, 1195
HpyF3I CTNAG 3 cut(s) 44, 218, 401
HpySE526I ACGT 2 cut(s) 182, 642
Hsp92II CATG 5 cut(s) 178, 490, 503, 1074, 1199
HspAI GCGC 3 cut(s) 666, 1005, 1111
Kpn2I TCCGGA 1 cut(s) 17
Kzo9I GATC 2 cut(s) 288, 564
LmnI GCTCC 4 cut(s) 253, 785, 829, 1106
Lsp1109I GCAGC 4 cut(s) 126, 431, 698, 1179
LweI GCATC 1 cut(s) 936
MaeII ACGT 2 cut(s) 182, 642
MaeIII GTNAC 3 cut(s) 409, 415, 455
MalI GATC 2 cut(s) 290, 566
MbiI CCGCTC 1 cut(s) 843
MboI GATC 2 cut(s) 288, 564
MboII GAAGA 5 cut(s) 33, 44, 47, 356, 947
MhlI GDGCHC 6 cut(s) 161, 632, 676, 794, 987, 1103
MlsI TGGCCA 2 cut(s) 425, 1067
MluCI AATT 3 cut(s) 86, 480, 726
MluNI TGGCCA 2 cut(s) 425, 1067
MlyI GAGTC 4 cut(s) 359, 524, 531, 845
MmeI TCCRAC 1 cut(s) 331
Mox20I TGGCCA 2 cut(s) 425, 1067
MroI TCCGGA 1 cut(s) 17
MscI TGGCCA 2 cut(s) 425, 1067
MseI TTAA 1 cut(s) 510
MslI CAYNNNNRTG 2 cut(s) 1061, 1160
Msp20I TGGCCA 2 cut(s) 425, 1067
MspA1I CMGCKG 1 cut(s) 570
MspI CCGG 3 cut(s) 18, 688, 1176
MspR9I CCNGG 9 cut(s) 110, 633, 688, 760, 821, 1009, 1052, 1171, 1176
MvaI CCWGG 7 cut(s) 110, 633, 760, 821, 1009, 1052, 1171
MvnI CGCG 2 cut(s) 101, 1111
NciI CCSGG 2 cut(s) 688, 1176
NdeII GATC 2 cut(s) 288, 564
NlaIII CATG 5 cut(s) 178, 490, 503, 1074, 1199
NlaIV GGNNCC 6 cut(s) 317, 630, 675, 753, 889, 943
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 1 cut(s) 409
NspI RCATGY 2 cut(s) 178, 1074
PagI TCATGA 1 cut(s) 499
PaqCI CACCTGC 1 cut(s) 685
PciI ACATGT 1 cut(s) 1070
PfeI GAWTC 3 cut(s) 40, 857, 1134
PflMI CCANNNNNTGG 1 cut(s) 167
PkrI GCNGC 5 cut(s) 103, 141, 446, 713, 1194
PleI GAGTC 4 cut(s) 359, 523, 531, 845
PpsI GAGTC 4 cut(s) 359, 523, 531, 845
PpuMI RGGWCCY 2 cut(s) 752, 1167
PscI ACATGT 1 cut(s) 1070
Psp5II RGGWCCY 2 cut(s) 752, 1167
Psp6I CCWGG 7 cut(s) 108, 631, 758, 819, 1007, 1050, 1169
PspFI CCCAGC 1 cut(s) 668
PspGI CCWGG 7 cut(s) 108, 631, 758, 819, 1007, 1050, 1169
PspN4I GGNNCC 6 cut(s) 317, 630, 675, 753, 889, 943
PspOMI GGGCCC 1 cut(s) 628
PspPPI RGGWCCY 2 cut(s) 752, 1167
PsrI GAACNNNNNNTAC 2 cut(s) 588, 620
PstI CTGCAG 1 cut(s) 935
PstNI CAGNNNCTG 3 cut(s) 167, 711, 924
PvuII CAGCTG 1 cut(s) 570
RsaI GTAC 3 cut(s) 114, 606, 949
RsaNI GTAC 3 cut(s) 113, 605, 948
RseI CAYNNNNRTG 2 cut(s) 1061, 1160
SalI GTCGAC 1 cut(s) 969
SaqAI TTAA 1 cut(s) 510
SatI GCNGC 5 cut(s) 102, 140, 445, 712, 1193
Sau3AI GATC 2 cut(s) 288, 564
SchI GAGTC 4 cut(s) 359, 524, 531, 845
ScrFI CCNGG 9 cut(s) 110, 633, 688, 760, 821, 1009, 1052, 1171, 1176
SduI GDGCHC 6 cut(s) 161, 632, 676, 794, 987, 1103
SfaNI GCATC 1 cut(s) 936
SfcI CTRYAG 1 cut(s) 931
SinI GGWCC 6 cut(s) 305, 316, 523, 752, 887, 1167
SmiMI CAYNNNNRTG 2 cut(s) 1061, 1160
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 3 cut(s) 86, 480, 726
SsiI CCGC 5 cut(s) 101, 749, 784, 827, 843
StyD4I CCNGG 9 cut(s) 108, 631, 686, 758, 819, 1007, 1050, 1169, 1174
StyI CCWWGG 1 cut(s) 420
TaaI ACNGT 3 cut(s) 257, 415, 1162
TaiI ACGT 2 cut(s) 185, 645
TaqI TCGA 3 cut(s) 970, 1046, 1085
TasI AATT 3 cut(s) 86, 480, 726
TatI WGTACW 1 cut(s) 604
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 3 cut(s) 40, 857, 1134
Tru1I TTAA 1 cut(s) 510
Tru9I TTAA 1 cut(s) 510
TscAI CASTG 1 cut(s) 409
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 4 cut(s) 139, 444, 711, 1192
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 1 cut(s) 357
TspGWI ACGGA 1 cut(s) 666
TspRI CASTG 1 cut(s) 409
Van91I CCANNNNNTGG 1 cut(s) 167
VpaK11BI GGWCC 6 cut(s) 305, 316, 523, 752, 887, 1167
XceI RCATGY 2 cut(s) 178, 1074
XmiI GTMKAC 1 cut(s) 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.