RchiOBHm_Chr1g0317981

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
5538569 .. 5542712
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54827

Sequence Viewer

Length: 3060 bp
ATGAAACAATTAAGGGAACTTCACTTAAATGGGACAGCTATAGAAGAGCTACCAACATCAATGAAACATTTGACTGGCCTTACTCTGCTCAATCTCAAAGAATGCAAGAACCTTCTTTGTCTGCCAGAGGTCATTTGTACCGCTTTGACATCACTTCAAATATTGAACCTCTCAGGGTGTTCAAATCTTGCCTTGTTGCCGGAAAGCTTGGTGTGTTTAGAATACTTAGAGGAGCTTCATGCAGGTGGGAGTGCTATACCACAATTTCCTTCCTCCATTCTACATCTGAAAAACCTGCAAGTTTTATCTTTTGCTGGTTGTAAGGGACTGCCATCCTCTGTGGGTTTCGAGTTGCCTGCTTCATTTTCATCTGGTTTATGCTCTTTGAAGAAATTAAACCTTCGCAACTGCAATCTGTGTGAAGGATCAATCCCAGATGATCTTGGAAGCGTATCCTCTTTGCAGTATCTAGATTTAAGTGGAAACAATTTCATGACCATACCAAAAAGTATCTCTCAACTTTCTCAGCTTGAAGACCTTGTATTGGATAATTGTAGCAACCTTCAATCATTGCCAAGACTTCCATCAAGTATAAGAGTTGTAACGGCACAGAATTGTCCTCTCCTACAGGGAACACATTCGAATAAATTAACGGTGTGGACTTCCACTGCTGCAGGATTTAGTGTTATAAATTGCCAAAGTGGTGAAGCCAAGCCTCAGTGGATTGACTTACCTGATCCACATCTTCGGAGGCCATTCTGTCAAACATTCTTCGAGGGTGCAATTTATCGCGGTAGTAATTTTGAATACAGTTATATATCAAAGGATACTCCTGCATGGTTGAGCCGTCGGAGTACTGGATCATCTATAACAATCCCACTGCCTCCGGATTTGGATGATAACTGTACATGGATGGGATTTGCTCTGTGTTTTACTTGTGTAACGCAGCATCATGATTCTCTGGATACAACATATGTCTTCCTTGATGACCAAACGCAAATAAACTTGAATCGCAATTTCCGTATTCATTTCTATACAACGGAAGATCCTCTTGAACGTCCCCTAGTGCATAATTACCCTGATTGCGATTGGGTTGGATCATTTATGCACTGGAACTATACACCAAGAAGTGATTTTGTAGAAATTTCGAATAAACGCTTCATCCGAGCTACAATTGTACCAGGCAGCCCAGAGGTGGAGGTGACAGGGTGTGCCGCGAGTCTAATATACTTGGAAGAAGTGGCAGAATTTGTCCAGAAAATGAATATTCACCATGACAATTGCAATAAAGGTTATAGGTATCTAGTGGATGCAATGGGAAGTATTCCTTCGACGAGCAGGATTCAAACTAAACCAGAAGTACAAAAACAAGAAACTAATAGCACTTCTGCCAGGCTTGTAGGACAATTGAGAAGAAACGTGGTGTCGTTGGTTGAAGAACTATTTGAGGGGGGCAACCCACGTCGCTATGATTATGGTTTTATTTTGCCTCTGGGAGAAAAATTAGCTTGGTTTAGTGAACAAGGTACTGGTTGTGTAGTGAGCTCCCCTCTTCCTCCAGAGCTGCATAATGATGAGAATTGGGTAGGATTTGCTCTCTATGTTGTTTGCACTTTGCCTCCAGGTGTTAGCCTTAGCCACAGATTATCATTCTTTGAGTGTCAATTTCATACATCTAATGAAGCCGTGGGTCCGAACCAATTGATACATCGCCTAGTGTTACGTTCCCCCTTCGATGACAATTTGATGGGGTCAAATCGACTCCTTCTTATTCATGTACCACGAGCACGTTTTCCAGAACGATTGAACCGGTGTCGTTGCATTCAAGCTTTATTTGGATCCACCACTCTAGGTGTGCAGGTTGATATATGTGGGATGCATCTAGTATACGACCAAGACTTGAACGGCTTAGTCCAAACAATTGCCCACTGCGCTGTGACTAGTCAGCCTGTTTACTACGGAATTGGTGATTTGACAGTTGCCACGAAATTAGGTAACAATGCTGGAATGACAGCTATGATTACGAATTTGCTCGAGGCAGCTAAATCCAGTGAGGGCAGGTCATTACGCCAAGTTCGTCTTCCTGTGGCTTTGGGGCCTGTAGATTCCGGTGAGACTACTCTGACTTTTAGAGGTTCTATCTTCTTTCCTGCTGACGGCTCCCAACATGAAAGAGAAAGAAGGCCCGTTCATGGGGACGAAACAAGTGCAATTGGTGATTTCAAGTTTCAGCTACCGGACTTTGGCCCTTCCTTTGACCGTTTCAATAACATGCGCTTGGATAATCAGATCCTGGGTTTTGATCGTTACTTGAAATACAATTCTTGTTTCCCTCCTAATGAAATTGCAGAGTGGTTTGGGCATCCAAGCAGTGGGTCCTCTGTAACAATCTCTCTACCATCATATCTGTATGATGACCCCAATTGGACAGGACTAGCTTTATGTGCATACTTTTCAGTCCTCAACCATACAACTACCGACCTTGACAATTTGGATCAAGAAATTTCTCACAACCTTACATGTCTTCTTGAAACTGATAGAGGTTGTCTGGAGTCTCTTCATGGCTATTGCACCACCAACCAAGAATTTGAGTGGTTATATCATATGGGAGGATTCATTTGGTTGTCCTATATACCACGATGGTGGTTTTTAGATCAGTTGAATGAACGCAGCCACCTGGAGGCTTCAATTGGAAGTGACCGTGGAAGCTTGTGTGTGCATAGGTGTGGTCTCCGTCTTTTATATCTGCAAGATGAGGAAGGGTTTAAGCAGACCATAATGCACTACATAACCTCCTTGTCTGATATTGATCAAGGGAAAAAAAAGCAATTCCAGGACTGCAAGGTGGGATCATCTCCTAGAACTGGCAGCTACATTGACTTTGATCGTTACTCGGTACATAATTTTTGTTTCCCTGCAACTGTAGCTCTAGAGTGGTTTGGGCATCAAAGCAATGGCTCCTCAGTAACAGTCCCACTACCACCAAACTTGCATAGTGATGCTAATTGGATAGGATTGACTTTATGTGCATCCTTCTCAGTCGAAATCCCCACCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1019

Amino Acids

113.92

Weight (kDa)

5.53

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 3 - 103 7.7e-09 Leucine-rich repeat region
LRR_14 PF23598 126 - 188 7.6e-07 Leucine-rich repeat region
LRR_8 PF13855 128 - 185 5.2e-06 Leucine rich repeat
C-JID PF20160 275 - 413 1.8e-06 C-JID domain
C-JID PF20160 777 - 919 6.1e-11 C-JID domain
C-JID PF20160 978 - 1014 4.7e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 689
AarI CACCTGC 1 cut(s) 233
Acc36I ACCTGC 4 cut(s) 233, 303, 1849, 2049
AccB7I CCANNNNNTGG 1 cut(s) 2372
AccI GTMKAC 1 cut(s) 1887
AccII CGCG 2 cut(s) 792, 1217
AccIII TCCGGA 1 cut(s) 886
AciI CCGC 3 cut(s) 141, 792, 1215
AcsI RAATTY 5 cut(s) 1143, 1247, 2026, 2502, 2585
AfaI GTAC 8 cut(s) 139, 856, 907, 1179, 1362, 1528, 1779, 2898
AfiI CCNNNNNNNGG 9 cut(s) 544, 1195, 2156, 2192, 2193, 2243, 2372, 2680, 2864
AflIII ACRYGT 1 cut(s) 2519
AgeI ACCGGT 1 cut(s) 1809
AhlI ACTAGT 1 cut(s) 1940
AjiI CACGTC 1 cut(s) 1463
AjnI CCWGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
AjuI GAANNNNNNNTTGG 2 cut(s) 2064, 2096
AleI CACNNNNGTG 1 cut(s) 2641
Alw21I GWGCWC 2 cut(s) 1547, 1789
Alw26I GTCTC 3 cut(s) 2108, 2559, 2735
AlwNI CAGNNNCTG 1 cut(s) 2293
Ama87I CYCGRG 1 cut(s) 2033
Aor13HI TCCGGA 1 cut(s) 886
AoxI GGCC 5 cut(s) 76, 752, 2096, 2183, 2245
ApeKI GCWGC 7 cut(s) 671, 946, 1185, 1564, 2039, 2670, 2868
ApoI RAATTY 5 cut(s) 1143, 1247, 2026, 2502, 2585
AsiGI ACCGGT 1 cut(s) 1809
Asp700I GAANNNNTTC 1 cut(s) 637
AspLEI GCGC 2 cut(s) 1934, 2277
AspS9I GGNCC 5 cut(s) 1691, 2096, 2184, 2246, 2376
AsuHPI GGTGA 6 cut(s) 716, 1213, 1262, 1979, 2123, 2228
AsuII TTCGAA 2 cut(s) 641, 1148
AvaI CYCGRG 1 cut(s) 2033
AvaII GGWCC 2 cut(s) 1691, 2376
BaeI ACNNNNGTAYC 2 cut(s) 1161, 1194
BamHI GGATCC 1 cut(s) 1838
BanII GRGCYC 1 cut(s) 1547
BauI CACGAG 1 cut(s) 1782
BbsI GAAGAC 4 cut(s) 540, 970, 2072, 2516
Bbv12I GWGCWC 2 cut(s) 1547, 1789
BbvI GCAGC 7 cut(s) 658, 958, 1197, 1551, 2051, 2682, 2880
BccI CCATC 6 cut(s) 340, 592, 907, 1741, 2407, 2634
BceAI ACGGC 5 cut(s) 621, 831, 1670, 1921, 2173
BcgI CGANNNNNNTGC 4 cut(s) 338, 372, 2189, 2223
BciT130I CCWGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
BciVI GTATCC 3 cut(s) 463, 820, 958
BclI TGATCA 1 cut(s) 2809
BcoDI GTCTC 3 cut(s) 2108, 2559, 2735
BcuI ACTAGT 1 cut(s) 1940
BfmI CTRYAG 5 cut(s) 39, 626, 672, 2100, 2922
BfuAI ACCTGC 4 cut(s) 233, 303, 1849, 2049
BfuI GTATCC 3 cut(s) 463, 820, 958
BisI GCNGC 8 cut(s) 672, 947, 1186, 1215, 1565, 2040, 2671, 2869
BlsI GCNGC 8 cut(s) 673, 948, 1187, 1216, 1566, 2041, 2672, 2870
BmcAI AGTACT 1 cut(s) 856
Bme1390I CCNGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
Bme18I GGWCC 2 cut(s) 1691, 2376
BmeT110I CYCGRG 1 cut(s) 2033
BmgBI CACGTC 1 cut(s) 1463
BmgT120I GGNCC 5 cut(s) 1691, 2096, 2184, 2246, 2376
BmiI GGNNCC 6 cut(s) 1692, 1840, 2097, 2161, 2377, 2959
BmrFI CCNGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
BmsI GCATC 8 cut(s) 958, 1300, 1866, 1888, 2371, 2953, 2989, 3038
BpiI GAAGAC 4 cut(s) 540, 970, 2072, 2516
BplI GAGNNNNNCTC 2 cut(s) 1534, 1566
BpmI CTGGAG 4 cut(s) 1542, 1605, 2570, 2699
Bpu10I CCTNAGC 1 cut(s) 1634
Bpu14I TTCGAA 2 cut(s) 641, 1148
BsaBI GATNNNNATC 2 cut(s) 741, 2808
BsaI GGTCTC 1 cut(s) 2735
BsaJI CCNNGG 3 cut(s) 1686, 2293, 2701
BsaWI WCCGGW 4 cut(s) 886, 1809, 2108, 2236
BsaXI ACNNNNNCTCC 4 cut(s) 1603, 1633, 2777, 2807
Bsc4I CCNNNNNNNGG 9 cut(s) 544, 1195, 2156, 2192, 2193, 2243, 2372, 2680, 2864
Bse118I RCCGGY 1 cut(s) 1809
Bse1I ACTGG 6 cut(s) 79, 862, 1115, 1534, 2049, 2869
Bse3DI GCAATG 3 cut(s) 569, 1320, 2959
Bse8I GATNNNNATC 2 cut(s) 741, 2808
BseAI TCCGGA 1 cut(s) 886
BseBI CCWGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
BseDI CCNNGG 3 cut(s) 1686, 2293, 2701
BseGI GGATG 8 cut(s) 332, 901, 918, 1161, 1315, 1881, 2362, 3029
BseJI GATNNNNATC 2 cut(s) 741, 2808
BseLI CCNNNNNNNGG 9 cut(s) 544, 1195, 2156, 2192, 2193, 2243, 2372, 2680, 2864
BseMI GCAATG 3 cut(s) 569, 1320, 2959
BseMII CTCAG 5 cut(s) 186, 539, 731, 2976, 3051
BseNI ACTGG 6 cut(s) 79, 862, 1115, 1534, 2049, 2869
BseRI GAGGAG 2 cut(s) 245, 2950
BseXI GCAGC 7 cut(s) 658, 958, 1197, 1551, 2051, 2682, 2880
BsgI GTGCAG 1 cut(s) 1877
Bsh1236I CGCG 2 cut(s) 792, 1217
BshFI GGCC 5 cut(s) 78, 754, 2098, 2185, 2247
BshTI ACCGGT 1 cut(s) 1809
BsiHKAI GWGCWC 2 cut(s) 1547, 1789
BsiHKCI CYCGRG 1 cut(s) 2033
BsiSI CCGG 5 cut(s) 200, 887, 1810, 2109, 2237
BslFI GGGAC 5 cut(s) 46, 339, 1044, 2210, 2957
BslI CCNNNNNNNGG 9 cut(s) 544, 1195, 2156, 2192, 2193, 2243, 2372, 2680, 2864
BsmAI GTCTC 3 cut(s) 2108, 2559, 2735
BsmFI GGGAC 5 cut(s) 46, 339, 1044, 2210, 2957
BsmI GAATGC 2 cut(s) 107, 1821
BsnI GGCC 5 cut(s) 78, 754, 2098, 2185, 2247
Bso31I GGTCTC 1 cut(s) 2735
BsoBI CYCGRG 1 cut(s) 2033
Bsp119I TTCGAA 2 cut(s) 641, 1148
Bsp1286I GDGCHC 2 cut(s) 1547, 1789
Bsp13I TCCGGA 1 cut(s) 886
Bsp1407I TGTACA 1 cut(s) 905
BspACI CCGC 3 cut(s) 141, 792, 1215
BspANI GGCC 5 cut(s) 78, 754, 2098, 2185, 2247
BspCNI CTCAG 5 cut(s) 185, 538, 730, 2975, 3050
BspEI TCCGGA 1 cut(s) 886
BspFNI CGCG 2 cut(s) 792, 1217
BspHI TCATGA 2 cut(s) 492, 952
BspLI GGNNCC 6 cut(s) 1692, 1840, 2097, 2161, 2377, 2959
BspMAI CTGCAG 1 cut(s) 676
BspMI ACCTGC 4 cut(s) 233, 303, 1849, 2049
BspQI GCTCTTC 1 cut(s) 39
BspT104I TTCGAA 2 cut(s) 641, 1148
BspTNI GGTCTC 1 cut(s) 2735
BsrDI GCAATG 3 cut(s) 569, 1320, 2959
BsrFI RCCGGY 1 cut(s) 1809
BsrGI TGTACA 1 cut(s) 905
BsrI ACTGG 6 cut(s) 79, 862, 1115, 1534, 2049, 2869
BssAI RCCGGY 1 cut(s) 1809
BssECI CCNNGG 3 cut(s) 1686, 2293, 2701
BssNAI GTATAC 1 cut(s) 1888
BssSI CACGAG 1 cut(s) 1782
Bst1107I GTATAC 1 cut(s) 1888
Bst2BI CACGAG 1 cut(s) 1782
Bst2UI CCWGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
Bst4CI ACNGT 8 cut(s) 655, 812, 905, 1978, 2261, 2702, 2923, 2971
Bst6I CTCTTC 3 cut(s) 39, 1557, 2562
BstAUI TGTACA 1 cut(s) 905
BstBI TTCGAA 2 cut(s) 641, 1148
BstC8I GCNNGC 1 cut(s) 357
BstDEI CTNAG 8 cut(s) 172, 226, 525, 717, 1634, 1909, 2962, 3037
BstDSI CCRYGG 2 cut(s) 1686, 2701
BstF5I GGATG 8 cut(s) 332, 901, 918, 1161, 1315, 1881, 2362, 3029
BstFNI CGCG 2 cut(s) 792, 1217
BstHHI GCGC 2 cut(s) 1934, 2277
BstMAI GTCTC 3 cut(s) 2108, 2559, 2735
BstMWI GCNNNNNNNGC 3 cut(s) 1931, 2444, 2924
BstNI CCWGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
BstNSI RCATGY 2 cut(s) 2275, 2523
BstSCI CCNGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
BstSFI CTRYAG 5 cut(s) 39, 626, 672, 2100, 2922
BstUI CGCG 2 cut(s) 792, 1217
BstV1I GCAGC 7 cut(s) 658, 958, 1197, 1551, 2051, 2682, 2880
BstV2I GAAGAC 4 cut(s) 540, 970, 2072, 2516
BstX2I RGATCY 3 cut(s) 1045, 1838, 2289
BstXI CCANNNNNNTGG 1 cut(s) 2643
BstYI RGATCY 3 cut(s) 1045, 1838, 2289
BstZ17I GTATAC 1 cut(s) 1888
BsuI GTATCC 3 cut(s) 463, 820, 958
BsuRI GGCC 5 cut(s) 78, 754, 2098, 2185, 2247
BtgI CCRYGG 2 cut(s) 1686, 2701
BtgZI GCGATG 1 cut(s) 1694
BtrI CACGTC 1 cut(s) 1463
BtsCI GGATG 8 cut(s) 332, 901, 918, 1161, 1315, 1881, 2362, 3029
BtsI GCAGTG 4 cut(s) 666, 878, 1927, 2377
BtsIMutI CAGTG 7 cut(s) 666, 725, 878, 1108, 1927, 2056, 2377
BveI ACCTGC 4 cut(s) 233, 303, 1849, 2049
Cac8I GCNNGC 1 cut(s) 357
CaiI CAGNNNCTG 1 cut(s) 2293
CciI TCATGA 2 cut(s) 492, 952
CfoI GCGC 2 cut(s) 1934, 2277
Cfr10I RCCGGY 1 cut(s) 1809
Cfr13I GGNCC 5 cut(s) 1691, 2096, 2184, 2246, 2376
Csp6I GTAC 8 cut(s) 138, 855, 906, 1178, 1361, 1527, 1778, 2897
CspAI ACCGGT 1 cut(s) 1809
CspCI CAANNNNNGTGG 2 cut(s) 2970, 3005
CviQI GTAC 8 cut(s) 138, 855, 906, 1178, 1361, 1527, 1778, 2897
DdeI CTNAG 8 cut(s) 172, 226, 525, 717, 1634, 1909, 2962, 3037
Eam1104I CTCTTC 3 cut(s) 39, 1557, 2562
EarI CTCTTC 3 cut(s) 39, 1557, 2562
Ecl136II GAGCTC 1 cut(s) 1545
Eco24I GRGCYC 1 cut(s) 1547
Eco31I GGTCTC 1 cut(s) 2735
Eco47I GGWCC 2 cut(s) 1691, 2376
Eco53kI GAGCTC 1 cut(s) 1545
Eco88I CYCGRG 1 cut(s) 2033
EcoICRI GAGCTC 1 cut(s) 1545
EcoO109I RGGNCCY 2 cut(s) 2096, 2376
EcoRII CCWGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
EcoT22I ATGCAT 1 cut(s) 1881
EcoT38I GRGCYC 1 cut(s) 1547
FalI AAGNNNNNCTT 6 cut(s) 1035, 1067, 1312, 1344, 2064, 2096
FaqI GGGAC 5 cut(s) 46, 339, 1044, 2210, 2957
FauNDI CATATG 2 cut(s) 973, 2604
FbaI TGATCA 1 cut(s) 2809
FblI GTMKAC 1 cut(s) 1887
Fnu4HI GCNGC 8 cut(s) 672, 947, 1186, 1215, 1565, 2040, 2671, 2869
FokI GGATG 8 cut(s) 319, 908, 925, 1148, 1322, 1888, 2349, 3016
FriOI GRGCYC 1 cut(s) 1547
Fsp4HI GCNGC 8 cut(s) 672, 947, 1186, 1215, 1565, 2040, 2671, 2869
GlaI GCGC 2 cut(s) 1933, 2276
GluI GCNGC 8 cut(s) 672, 947, 1186, 1215, 1565, 2040, 2671, 2869
GsuI CTGGAG 4 cut(s) 1542, 1605, 2570, 2699
HaeIII GGCC 5 cut(s) 78, 754, 2098, 2185, 2247
HapII CCGG 5 cut(s) 200, 887, 1810, 2109, 2237
HhaI GCGC 2 cut(s) 1934, 2277
Hin6I GCGC 2 cut(s) 1932, 2275
HinP1I GCGC 2 cut(s) 1932, 2275
HindIII AAGCTT 3 cut(s) 205, 1827, 2707
HinfI GANTC 8 cut(s) 956, 1009, 1219, 1342, 1761, 2105, 2552, 2613
HpaII CCGG 5 cut(s) 200, 887, 1810, 2109, 2237
HphI GGTGA 6 cut(s) 716, 1213, 1262, 1979, 2123, 2228
Hpy166II GTNNAC 4 cut(s) 660, 1520, 1888, 1954
Hpy188I TCNGA 8 cut(s) 288, 750, 852, 1166, 1695, 2124, 2289, 2803
Hpy8I GTNNAC 4 cut(s) 660, 1520, 1888, 1954
Hpy99I CGWCG 3 cut(s) 852, 1336, 1467
HpyCH4III ACNGT 8 cut(s) 655, 812, 905, 1978, 2261, 2702, 2923, 2971
HpyCH4IV ACGT 5 cut(s) 1057, 1419, 1462, 1723, 1789
HpyF10VI GCNNNNNNNGC 3 cut(s) 1931, 2444, 2924
HpyF3I CTNAG 8 cut(s) 172, 226, 525, 717, 1634, 1909, 2962, 3037
HpySE526I ACGT 5 cut(s) 1057, 1419, 1462, 1723, 1789
HspAI GCGC 2 cut(s) 1932, 2275
Kpn2I TCCGGA 1 cut(s) 886
Ksp22I TGATCA 1 cut(s) 2809
LguI GCTCTTC 1 cut(s) 39
LmnI GCTCC 4 cut(s) 232, 1550, 2165, 2963
Lsp1109I GCAGC 7 cut(s) 658, 958, 1197, 1551, 2051, 2682, 2880
LweI GCATC 8 cut(s) 958, 1300, 1866, 1888, 2371, 2953, 2989, 3038
MaeII ACGT 5 cut(s) 1057, 1419, 1462, 1723, 1789
MfeI CAATTG 8 cut(s) 1173, 1279, 1406, 1700, 1920, 2211, 2422, 2688
MflI RGATCY 3 cut(s) 1045, 1838, 2289
MhlI GDGCHC 2 cut(s) 1547, 1789
MlyI GAGTC 3 cut(s) 1228, 1755, 2561
MmeI TCCRAC 2 cut(s) 830, 1075
Mph1103I ATGCAT 1 cut(s) 1881
MroI TCCGGA 1 cut(s) 886
MroXI GAANNNNTTC 1 cut(s) 637
MseI TTAA 6 cut(s) 11, 26, 395, 476, 650, 2766
MslI CAYNNNNRTG 6 cut(s) 27, 243, 1572, 2641, 2724, 2997
MspI CCGG 5 cut(s) 200, 887, 1810, 2109, 2237
MspR9I CCNGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
MunI CAATTG 8 cut(s) 1173, 1279, 1406, 1700, 1920, 2211, 2422, 2688
Mva1269I GAATGC 2 cut(s) 107, 1821
MvaI CCWGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
MvnI CGCG 2 cut(s) 792, 1217
MwoI GCNNNNNNNGC 3 cut(s) 1931, 2444, 2924
NdeI CATATG 2 cut(s) 973, 2604
NlaIV GGNNCC 6 cut(s) 1692, 1840, 2097, 2161, 2377, 2959
NmuCI GTSAC 3 cut(s) 1201, 1936, 2696
NsiI ATGCAT 1 cut(s) 1881
NspI RCATGY 2 cut(s) 2275, 2523
NspV TTCGAA 2 cut(s) 641, 1148
OliI CACNNNNGTG 1 cut(s) 2641
PaeR7I CTCGAG 1 cut(s) 2033
PagI TCATGA 2 cut(s) 492, 952
PaqCI CACCTGC 1 cut(s) 233
PciI ACATGT 1 cut(s) 2519
PciSI GCTCTTC 1 cut(s) 39
PcsI WCGNNNNNNNCGW 3 cut(s) 1018, 1162, 2074
PctI GAATGC 2 cut(s) 107, 1821
PdmI GAANNNNTTC 1 cut(s) 637
PfeI GAWTC 5 cut(s) 956, 1009, 1342, 2105, 2613
PflMI CCANNNNNTGG 1 cut(s) 2372
PfoI TCCNGGA 1 cut(s) 2832
PinAI ACCGGT 1 cut(s) 1809
PkrI GCNGC 8 cut(s) 673, 948, 1187, 1216, 1566, 2041, 2672, 2870
PleI GAGTC 3 cut(s) 1227, 1755, 2560
PpsI GAGTC 3 cut(s) 1227, 1755, 2560
PpuMI RGGWCCY 1 cut(s) 2376
PscI ACATGT 1 cut(s) 2519
PsiI TTATAA 1 cut(s) 689
Psp124BI GAGCTC 1 cut(s) 1547
Psp5II RGGWCCY 1 cut(s) 2376
Psp6I CCWGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
PspGI CCWGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
PspN4I GGNNCC 6 cut(s) 1692, 1840, 2097, 2161, 2377, 2959
PspPI GGNCC 5 cut(s) 1691, 2096, 2184, 2246, 2376
PspPPI RGGWCCY 1 cut(s) 2376
PspXI VCTCGAGB 1 cut(s) 2033
PstI CTGCAG 1 cut(s) 676
PstNI CAGNNNCTG 1 cut(s) 2293
PsuI RGATCY 3 cut(s) 1045, 1838, 2289
RsaI GTAC 8 cut(s) 139, 856, 907, 1179, 1362, 1528, 1779, 2898
RsaNI GTAC 8 cut(s) 138, 855, 906, 1178, 1361, 1527, 1778, 2897
RseI CAYNNNNRTG 6 cut(s) 27, 243, 1572, 2641, 2724, 2997
SacI GAGCTC 1 cut(s) 1547
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 6 cut(s) 11, 26, 395, 476, 650, 2766
SatI GCNGC 8 cut(s) 672, 947, 1186, 1215, 1565, 2040, 2671, 2869
Sau96I GGNCC 5 cut(s) 1691, 2096, 2184, 2246, 2376
ScaI AGTACT 1 cut(s) 856
SchI GAGTC 3 cut(s) 1228, 1755, 2561
ScrFI CCNGG 6 cut(s) 1182, 1393, 1623, 2294, 2678, 2834
SduI GDGCHC 2 cut(s) 1547, 1789
SfaNI GCATC 8 cut(s) 958, 1300, 1866, 1888, 2371, 2953, 2989, 3038
SfcI CTRYAG 5 cut(s) 39, 626, 672, 2100, 2922
Sfr274I CTCGAG 1 cut(s) 2033
SfuI TTCGAA 2 cut(s) 641, 1148
SinI GGWCC 2 cut(s) 1691, 2376
SlaI CTCGAG 1 cut(s) 2033
SmiMI CAYNNNNRTG 6 cut(s) 27, 243, 1572, 2641, 2724, 2997
SmlI CTYRAG 1 cut(s) 2033
SmoI CTYRAG 1 cut(s) 2033
SpeI ACTAGT 1 cut(s) 1940
SsiI CCGC 3 cut(s) 141, 792, 1215
SspI AATATT 2 cut(s) 162, 1267
SstI GAGCTC 1 cut(s) 1547
StyD4I CCNGG 6 cut(s) 1180, 1391, 1621, 2292, 2676, 2832
TaaI ACNGT 8 cut(s) 655, 812, 905, 1978, 2261, 2702, 2923, 2971
TaiI ACGT 5 cut(s) 1060, 1422, 1465, 1726, 1792
TaqI TCGA 9 cut(s) 348, 641, 774, 1148, 1331, 1734, 1759, 2034, 3042
TatI WGTACW 3 cut(s) 854, 905, 1360
TauI GCSGC 1 cut(s) 1217
TfiI GAWTC 5 cut(s) 956, 1009, 1342, 2105, 2613
Tru1I TTAA 6 cut(s) 11, 26, 395, 476, 650, 2766
Tru9I TTAA 6 cut(s) 11, 26, 395, 476, 650, 2766
TscAI CASTG 7 cut(s) 673, 725, 885, 1115, 1934, 2056, 2377
TseFI GTSAC 3 cut(s) 1201, 1936, 2696
TseI GCWGC 7 cut(s) 671, 946, 1185, 1564, 2039, 2670, 2868
Tsp45I GTSAC 3 cut(s) 1201, 1936, 2696
TspGWI ACGGA 4 cut(s) 1010, 1055, 1974, 2723
TspRI CASTG 7 cut(s) 673, 725, 885, 1115, 1934, 2056, 2377
Van91I CCANNNNNTGG 1 cut(s) 2372
VpaK11BI GGWCC 2 cut(s) 1691, 2376
XapI RAATTY 5 cut(s) 1143, 1247, 2026, 2502, 2585
XbaI TCTAGA 2 cut(s) 469, 2929
XceI RCATGY 2 cut(s) 2275, 2523
XhoI CTCGAG 1 cut(s) 2033
XmiI GTMKAC 1 cut(s) 1887
XmnI GAANNNNTTC 1 cut(s) 637
ZrmI AGTACT 1 cut(s) 856
Zsp2I ATGCAT 1 cut(s) 1881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.