Rmu_ssc0000008.1_g000026

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000008.1
Physical Location & Seq
Forward (+)
79665 .. 85035
5371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000008.1_g000026.1.cds

Sequence Viewer

Length: 4119 bp
atgggcagagaaattgttcgagggcagtcccaaaagccaggaaagcgcagcagattgtggcttcatacagatgcccttcctttacttaggaataataaggggacagatgctgtcaaaggtattttcttatgctcacctcaacaagacaatgtgcacttgaaggctgaccccttcccaaacatggaaactctaagattgttgaaaatttacaatgtgatattttctggatgcctcgaatttctttcaaatgagttaagcttcttggaatggcatggatatcctttaaaatctctgccttcaggttttgaacctgataaactcgttgaactgaatttgtatcagagtcaaatagagcaattgtgggaggaaattgagaggcctttggaaaagttggtgataatcaaccttagcgactgtgaatacttgatcaagacccctgactttgataaagtgccgaaccttgagaggctaatcctcaaaggttgtaccagattgtctgaggtcgacctctctgttggagtgctacaacggctcattgtgttgaatctgaaaggttgtgaatgccttacaagttttcttcccaagagtatcaacttgagatctctcacaaagttcaatctttcgggatgttccaaactaaaaaaccttccggagtttggggaagaaatgaaacaattaagggaacttcacttaaatgggacagctatagaagagctaccaacatcaatgaaacatttgactggccttactctgctcaatctcaaagactgcaagaaccttctctgtctgccagaggtcatttgtaccactttgacatcacttcaaatattgaacctctcagggtgttcaaatcttgccttgttgcaggaaagcttggggtgtttagaatatttagaggaacttcatgcaggtgggagtgctataccacaatttccttcccccattctacatctgaaaaacctgcaagttttatcttttgctggttgtaagggactgccaccctctgtgggtttcgagttgcctgcttcattttcatctggtttatgctctttgaagaaattaaatcttcggaactgcaatctgtgtgaaggatcaatcccagatgatcttggaagcgtatcctctttgcagtatctagatttaagtggaaacaatttcgtgaccataccaaaaagtatctctcaactttctcagcttgaggaccttgtattggataattgtagcaaccttcgatcattgccacgacttccatcaagtataagatctgtatcggcacagaattgtcctctcctacagggaacacattcgaataaattaacggtgtggacctccactgctgcaggatttagttatataaattgccaaagtaacgaatccagacctgagctggttgccttacctgatccacatcttcggcggccatttagtcaaacattcttcgagggcgcaatttatcgcggtagtaagtttgaatatagttatatatcaaacgatactcctgcatggttgagccgtcggtgtgctggatcatctataacaatcccgctacctccggatttagatggtaacagtaaatggatgggatttgctctgtgttttacttgtgtagcgcagcatcatgattatctggatacaagtacaacatatgtcttcgaagatcgtgatgaccaagggcaattaaaatttagtcgcaattacaatattcatttctatacaacggaagaccctcttgaacgtcccctagtgcataattatcatgactgcgattgggttggatcatttatgcactggaactatacaccaagaagtgattttgtagaaatgtcgaataaacgcttcatccgagcttcaattgtaccaggcagcccaggggtggaggtgacagggtgtgcggcgagtctaatatactcggaagaagtggcagaatttgtccagaaaatgaatattcaccatgacaattgcaataaaggttataggtatctagtggatgcaatgggaagtattcagtcgacgagcagggttcaaactaaaccagaaaactatttgagggggggcaacccacgtcgctatgattatggttttattttgtctctgggagaaaaattagcttggtttagtgaacaaagtactgggtgtgtagtgagctccccccttcctccagagctgcataatgatgagaattgggtaggatttgccctctatgttgtctgtactctgcctccaggtgttcgccttagccacagattgtctttctttgagtgtcaattctatacatctaatgaagccgtgggtccgaaccaattgatacatcgcctattcttacgttctcccttcgatgacaatttgatggggtcaaatcgactccttcttattcatataccacgaggacgttttccagaacgattgaacaggtgtcgttgcattcaagctttatttggatctaccactccaggtgtgcaggttgatatatgtgggatgcatctagtatacgaccaagacttgaacggcttagtccaaacaattgcccactgcgctgtgactagtcggcctgtttactacggaattggtgattttacacttgccacgaaattaggtacaagtgtgggagtgacacctatggttatgaatttgctcgaggcagccaaatccagtgagggcaggtcattgcatcaagttcgtcttcctttggggcctttagattctgaccccgatactctgactattacaagaggttctttcatgttttctgctgagagctcgcaacatgaaagagaaagaaggcccgttcatcaggacgaaacaagtgcaattggtgatttcaagtttcggctaccggactttggcccttcctttgaccgtttcaataacatgcgcttggataatcagctcttgggttttgaccgttacttgaaatacaattcttgtttccctcctaatgagattgtagggtggtttgggcatccaagcagtgggtcctcggtaacaatcccactaccaccatatctgtatgatgaccccaattggacgggactagctttatgcgcatacttttcagtcctcaaccgtacaactaccgaccttgacaacttggatcaagaaatttctcacaaccttacatgttttcttgaaactgatagaggttgtctggagtctcttcatggctattgcaccaccaacgaagaattcgagtggttatatcatatgggaggattcatttggttgtcctatataccacgatggtggtttttagatcagttgaatgaacgcagccacctggaggcttcaattggaagcgaccgtggaagcttgtgtgtgcataggtgtggtctccgtcttatgtatctgcaagatgaggaaggctttaagcagaccataatgcactgcatgacctccttgtctgatattgatcaagggaaaaataagcaattccaggactgtcaggtgggatcacctcctaaaactggcagctacattgactttgatcgttactcggtacataatatttgtttccctgcaactgtagctctagagtggtttgggcatcaaagcagcggctcctcagtaacagtctcactaccaccgaacttgcatagtgacgctaattggataggattgactttatgtgcatccttctcagtcgtggagcatccaactgccgaccttgaaaatttagattcaggaaattctcaccacctgatatgtcatttggagtcagaaagaggtagtatcgaacctcttcataactattgcaccaccaacgaagaattccagtggttgcattttggaggattcatttgggtatcctatataccacgagagtggtttttggatcaattgaatgaatgcagtgtcctcgagacttcaattgcaagtgatcatgaaagctttagggtgcataaatgtgaggtccgttgtgtatatcagcatgatatggaagagtttaagcagaacatattgcactgtatgacctcgttctcttgcaataaaggagatgacaagcaatgccttgcacgtgaatgccctgcaggtgatgcaggatcatcaagcactcctagcagcttcattgtggaacctcatcttgaaagattagaatggctgaattacaagaaatgggtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1372

Amino Acids

154.94

Weight (kDa)

5.64

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 899, 4016
AasI GACNNNNNNGTC 1 cut(s) 3394
Acc16I TGCGCA 1 cut(s) 3043
Acc36I ACCTGC 5 cut(s) 899, 969, 2449, 2649, 4016
AccB7I CCANNNNNTGG 1 cut(s) 2969
AccI GTMKAC 3 cut(s) 504, 2009, 2487
AccII CGCG 1 cut(s) 1458
AccIII TCCGGA 2 cut(s) 649, 1552
AciI CCGC 5 cut(s) 1417, 1458, 1544, 1892, 3552
AclWI GGATC 9 cut(s) 1099, 1397, 1534, 1783, 2446, 3099, 3454, 3837, 4045
AcoI YGGCCR 1 cut(s) 1418
AcuI CTGAAG 1 cut(s) 282
AcvI CACGTG 1 cut(s) 4013
AfaI GTAC 9 cut(s) 487, 805, 1639, 1857, 2128, 2212, 2596, 3067, 3495
AfiI CCNNNNNNNGG 9 cut(s) 181, 656, 1007, 1210, 1873, 2840, 2969, 3277, 3461
AflIII ACRYGT 1 cut(s) 3116
AhlI ACTAGT 1 cut(s) 2540
AjiI CACGTC 1 cut(s) 2063
AjnI CCWGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
AjuI GAANNNNNNNTTGG 4 cut(s) 3167, 3199, 3749, 3781
AleI CACNNNNGTG 2 cut(s) 3238, 3817
Alw21I GWGCWC 3 cut(s) 156, 2147, 2759
Alw26I GTCTC 5 cut(s) 2094, 3156, 3332, 3574, 3851
Alw44I GTGCAC 1 cut(s) 152
AlwI GGATC 9 cut(s) 1099, 1397, 1534, 1783, 2446, 3099, 3454, 3837, 4045
AlwNI CAGNNNCTG 1 cut(s) 110
Ama87I CYCGRG 2 cut(s) 2633, 3854
Aor13HI TCCGGA 2 cut(s) 649, 1552
AoxI GGCC 7 cut(s) 377, 742, 1418, 2546, 2690, 2780, 2842
ApaLI GTGCAC 1 cut(s) 152
Asp700I GAANNNNTTC 3 cut(s) 15, 1303, 3735
AspLEI GCGC 6 cut(s) 48, 1448, 1612, 2534, 2874, 3044
AspS9I GGNCC 8 cut(s) 1201, 1326, 2291, 2690, 2781, 2843, 2973, 3907
AsuHPI GGTGA 9 cut(s) 126, 406, 1891, 1940, 2579, 2825, 3441, 3680, 4040
AsuII TTCGAA 2 cut(s) 1307, 1653
AvaI CYCGRG 2 cut(s) 2633, 3854
AvaII GGWCC 5 cut(s) 1201, 1326, 2291, 2973, 3907
BaeGI GKGCMC 1 cut(s) 156
BaeI ACNNNNGTAYC 2 cut(s) 2586, 2619
BanII GRGCYC 2 cut(s) 2147, 2759
BauI CACGAG 2 cut(s) 2382, 3813
BbrPI CACGTG 1 cut(s) 4013
BbsI GAAGAC 3 cut(s) 1642, 1728, 2672
Bbv12I GWGCWC 3 cut(s) 156, 2147, 2759
BccI CCATC 5 cut(s) 1258, 1556, 1573, 2341, 3231
BceAI ACGGC 4 cut(s) 545, 1497, 2270, 2521
BciT130I CCWGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
BciVI GTATCC 3 cut(s) 1129, 1624, 3811
BclI TGATCA 3 cut(s) 426, 3406, 3874
BcoDI GTCTC 5 cut(s) 2094, 3156, 3332, 3574, 3851
BcuI ACTAGT 1 cut(s) 2540
BfaI CTAG 8 cut(s) 1136, 1742, 1982, 2483, 2541, 3032, 3527, 4053
BfmI CTRYAG 5 cut(s) 705, 1292, 1338, 3519, 4023
BfuAI ACCTGC 5 cut(s) 899, 969, 2449, 2649, 4016
BfuI GTATCC 3 cut(s) 1129, 1624, 3811
BglII AGATCT 2 cut(s) 599, 1262
BmcAI AGTACT 1 cut(s) 2128
Bme1390I CCNGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
Bme18I GGWCC 5 cut(s) 1201, 1326, 2291, 2973, 3907
BmeT110I CYCGRG 2 cut(s) 2633, 3854
BmgBI CACGTC 1 cut(s) 2063
BmgT120I GGNCC 8 cut(s) 1201, 1326, 2291, 2690, 2781, 2843, 2973, 3907
BmiI GGNNCC 5 cut(s) 2292, 2691, 2974, 3556, 4071
BmrFI CCNGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
BmrI ACTGGG 1 cut(s) 2139
BmuI ACTGGG 1 cut(s) 2139
BpiI GAAGAC 3 cut(s) 1642, 1728, 2672
BpmI CTGGAG 5 cut(s) 2142, 2205, 2433, 3167, 3296
Bpu10I CCTNAGC 3 cut(s) 407, 1383, 2234
Bpu14I TTCGAA 2 cut(s) 1307, 1653
BpuEI CTTGAG 3 cut(s) 482, 616, 1217
BsaAI YACGTR 1 cut(s) 4013
BsaBI GATNNNNATC 3 cut(s) 1267, 1407, 3405
BsaI GGTCTC 1 cut(s) 3332
BsaJI CCNNGG 6 cut(s) 1669, 1867, 1868, 2286, 2976, 3298
BsaWI WCCGGW 3 cut(s) 649, 1552, 2833
BsaXI ACNNNNNCTCC 2 cut(s) 2203, 2233
Bsc4I CCNNNNNNNGG 9 cut(s) 181, 656, 1007, 1210, 1873, 2840, 2969, 3277, 3461
Bse1I ACTGG 6 cut(s) 745, 1793, 2134, 2649, 3466, 3769
Bse3DI GCAATG 4 cut(s) 1235, 1998, 2663, 4007
Bse8I GATNNNNATC 3 cut(s) 1267, 1407, 3405
BseAI TCCGGA 2 cut(s) 649, 1552
BseBI CCWGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
BseDI CCNNGG 6 cut(s) 1669, 1867, 1868, 2286, 2976, 3298
BseGI GGATG 9 cut(s) 233, 632, 1584, 1839, 1993, 2481, 2959, 3626, 3646
BseJI GATNNNNATC 3 cut(s) 1267, 1407, 3405
BseLI CCNNNNNNNGG 9 cut(s) 181, 656, 1007, 1210, 1873, 2840, 2969, 3277, 3461
BseMI GCAATG 4 cut(s) 1235, 1998, 2663, 4007
BseMII CTCAG 7 cut(s) 489, 852, 1205, 1374, 2742, 3573, 3648
BseNI ACTGG 6 cut(s) 745, 1793, 2134, 2649, 3466, 3769
BseRI GAGGAG 1 cut(s) 3547
BseSI GKGCMC 1 cut(s) 156
BsgI GTGCAG 1 cut(s) 2477
Bsh1236I CGCG 1 cut(s) 1458
Bsh1285I CGRYCG 1 cut(s) 3298
BshFI GGCC 7 cut(s) 379, 744, 1420, 2548, 2692, 2782, 2844
BsiEI CGRYCG 1 cut(s) 3298
BsiHKAI GWGCWC 3 cut(s) 156, 2147, 2759
BsiHKCI CYCGRG 2 cut(s) 2633, 3854
BsiSI CCGG 3 cut(s) 650, 1553, 2834
BslFI GGGAC 6 cut(s) 13, 115, 712, 1005, 1722, 3042
BslI CCNNNNNNNGG 9 cut(s) 181, 656, 1007, 1210, 1873, 2840, 2969, 3277, 3461
BsmAI GTCTC 5 cut(s) 2094, 3156, 3332, 3574, 3851
BsmFI GGGAC 6 cut(s) 13, 115, 712, 1005, 1722, 3042
BsmI GAATGC 4 cut(s) 566, 2421, 3848, 4022
BsnI GGCC 7 cut(s) 379, 744, 1420, 2548, 2692, 2782, 2844
Bso31I GGTCTC 1 cut(s) 3332
BsoBI CYCGRG 2 cut(s) 2633, 3854
Bsp119I TTCGAA 2 cut(s) 1307, 1653
Bsp1286I GDGCHC 3 cut(s) 156, 2147, 2759
Bsp13I TCCGGA 2 cut(s) 649, 1552
BspACI CCGC 5 cut(s) 1417, 1458, 1544, 1892, 3552
BspANI GGCC 7 cut(s) 379, 744, 1420, 2548, 2692, 2782, 2844
BspCNI CTCAG 7 cut(s) 490, 851, 1204, 1375, 2743, 3572, 3647
BspEI TCCGGA 2 cut(s) 649, 1552
BspFNI CGCG 1 cut(s) 1458
BspHI TCATGA 3 cut(s) 1618, 1756, 3877
BspLI GGNNCC 5 cut(s) 2292, 2691, 2974, 3556, 4071
BspMAI CTGCAG 2 cut(s) 1342, 4027
BspMI ACCTGC 5 cut(s) 899, 969, 2449, 2649, 4016
BspPI GGATC 9 cut(s) 1099, 1397, 1534, 1783, 2446, 3099, 3454, 3837, 4045
BspQI GCTCTTC 1 cut(s) 705
BspT104I TTCGAA 2 cut(s) 1307, 1653
BspTNI GGTCTC 1 cut(s) 3332
BsrDI GCAATG 4 cut(s) 1235, 1998, 2663, 4007
BsrI ACTGG 6 cut(s) 745, 1793, 2134, 2649, 3466, 3769
BssECI CCNNGG 6 cut(s) 1669, 1867, 1868, 2286, 2976, 3298
BssNAI GTATAC 1 cut(s) 2488
BssSI CACGAG 2 cut(s) 2382, 3813
BssT1I CCWWGG 1 cut(s) 1669
Bst1107I GTATAC 1 cut(s) 2488
Bst2BI CACGAG 2 cut(s) 2382, 3813
Bst2UI CCWGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
Bst6I CTCTTC 4 cut(s) 705, 3159, 3741, 3930
BstAPI GCANNNNNTGC 1 cut(s) 4031
BstBAI YACGTR 1 cut(s) 4013
BstBI TTCGAA 2 cut(s) 1307, 1653
BstC8I GCNNGC 2 cut(s) 1023, 2759
BstDSI CCRYGG 2 cut(s) 2286, 3298
BstF5I GGATG 9 cut(s) 233, 632, 1584, 1839, 1993, 2481, 2959, 3626, 3646
BstFNI CGCG 1 cut(s) 1458
BstHHI GCGC 6 cut(s) 48, 1448, 1612, 2534, 2874, 3044
BstMAI GTCTC 5 cut(s) 2094, 3156, 3332, 3574, 3851
BstMCI CGRYCG 1 cut(s) 3298
BstMWI GCNNNNNNNGC 7 cut(s) 43, 529, 2531, 3041, 3521, 4031, 4053
BstNI CCWGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
BstNSI RCATGY 2 cut(s) 2872, 3120
BstSCI CCNGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
BstSFI CTRYAG 5 cut(s) 705, 1292, 1338, 3519, 4023
BstSLI GKGCMC 1 cut(s) 156
BstUI CGCG 1 cut(s) 1458
BstV2I GAAGAC 3 cut(s) 1642, 1728, 2672
BstX2I RGATCY 3 cut(s) 599, 1262, 2438
BstXI CCANNNNNNTGG 2 cut(s) 3240, 3819
BstYI RGATCY 3 cut(s) 599, 1262, 2438
BstZ17I GTATAC 1 cut(s) 2488
BsuI GTATCC 3 cut(s) 1129, 1624, 3811
BsuRI GGCC 7 cut(s) 379, 744, 1420, 2548, 2692, 2782, 2844
BtgI CCRYGG 2 cut(s) 2286, 3298
BtgZI GCGATG 1 cut(s) 2294
BtrI CACGTC 1 cut(s) 2063
BtsCI GGATG 9 cut(s) 233, 632, 1584, 1839, 1993, 2481, 2959, 3626, 3646
BtsI GCAGTG 5 cut(s) 1332, 2527, 2974, 3379, 3853
BtsIMutI CAGTG 9 cut(s) 1332, 1786, 2527, 2656, 2974, 3379, 3776, 3853, 3958
BveI ACCTGC 5 cut(s) 899, 969, 2449, 2649, 4016
Cac8I GCNNGC 2 cut(s) 1023, 2759
CaiI CAGNNNCTG 1 cut(s) 110
CciI TCATGA 3 cut(s) 1618, 1756, 3877
CfoI GCGC 6 cut(s) 48, 1448, 1612, 2534, 2874, 3044
Cfr13I GGNCC 8 cut(s) 1201, 1326, 2291, 2690, 2781, 2843, 2973, 3907
CseI GACGC 1 cut(s) 3605
Csp6I GTAC 9 cut(s) 486, 804, 1638, 1856, 2127, 2211, 2595, 3066, 3494
CspCI CAANNNNNGTGG 2 cut(s) 3567, 3602
CviQI GTAC 9 cut(s) 486, 804, 1638, 1856, 2127, 2211, 2595, 3066, 3494
DraI TTTAAA 1 cut(s) 285
DrdI GACNNNNNNGTC 1 cut(s) 3394
DseDI GACNNNNNNGTC 1 cut(s) 3394
EaeI YGGCCR 1 cut(s) 1418
Eam1104I CTCTTC 4 cut(s) 705, 3159, 3741, 3930
EarI CTCTTC 4 cut(s) 705, 3159, 3741, 3930
Ecl136II GAGCTC 2 cut(s) 2145, 2757
Eco130I CCWWGG 1 cut(s) 1669
Eco147I AGGCCT 1 cut(s) 379
Eco24I GRGCYC 2 cut(s) 2147, 2759
Eco31I GGTCTC 1 cut(s) 3332
Eco32I GATATC 1 cut(s) 278
Eco47I GGWCC 5 cut(s) 1201, 1326, 2291, 2973, 3907
Eco53kI GAGCTC 2 cut(s) 2145, 2757
Eco57I CTGAAG 1 cut(s) 282
Eco72I CACGTG 1 cut(s) 4013
Eco88I CYCGRG 2 cut(s) 2633, 3854
EcoICRI GAGCTC 2 cut(s) 2145, 2757
EcoO109I RGGNCCY 3 cut(s) 1201, 2690, 2973
EcoRI GAATTC 2 cut(s) 3182, 3764
EcoRII CCWGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
EcoRV GATATC 1 cut(s) 278
EcoT14I CCWWGG 1 cut(s) 1669
EcoT22I ATGCAT 1 cut(s) 2481
EcoT38I GRGCYC 2 cut(s) 2147, 2759
ErhI CCWWGG 1 cut(s) 1669
FalI AAGNNNNNCTT 6 cut(s) 1713, 1745, 2664, 2696, 2719, 2751
FaqI GGGAC 6 cut(s) 13, 115, 712, 1005, 1722, 3042
FauI CCCGC 1 cut(s) 1551
FauNDI CATATG 2 cut(s) 1645, 3201
FbaI TGATCA 3 cut(s) 426, 3406, 3874
FblI GTMKAC 3 cut(s) 504, 2009, 2487
FokI GGATG 9 cut(s) 240, 639, 1591, 1826, 2000, 2488, 2946, 3613, 3633
FriOI GRGCYC 2 cut(s) 2147, 2759
FspAI RTGCGCAY 1 cut(s) 3043
FspBI CTAG 8 cut(s) 1136, 1742, 1982, 2483, 2541, 3032, 3527, 4053
FspI TGCGCA 1 cut(s) 3043
GlaI GCGC 6 cut(s) 47, 1447, 1611, 2533, 2873, 3043
GsuI CTGGAG 5 cut(s) 2142, 2205, 2433, 3167, 3296
HaeIII GGCC 7 cut(s) 379, 744, 1420, 2548, 2692, 2782, 2844
HapII CCGG 3 cut(s) 650, 1553, 2834
HgaI GACGC 1 cut(s) 3605
HhaI GCGC 6 cut(s) 48, 1448, 1612, 2534, 2874, 3044
Hin6I GCGC 6 cut(s) 46, 1446, 1610, 2532, 2872, 3042
HinP1I GCGC 6 cut(s) 46, 1446, 1610, 2532, 2872, 3042
HincII GTYRAC 2 cut(s) 505, 2010
HindII GTYRAC 2 cut(s) 505, 2010
HindIII AAGCTT 5 cut(s) 256, 871, 2427, 3304, 3883
HpaII CCGG 3 cut(s) 650, 1553, 2834
HphI GGTGA 9 cut(s) 126, 406, 1891, 1940, 2579, 2825, 3441, 3680, 4040
Hpy166II GTNNAC 7 cut(s) 154, 505, 1326, 2010, 2120, 2488, 2554
Hpy8I GTNNAC 7 cut(s) 154, 505, 1326, 2010, 2120, 2488, 2554
Hpy99I CGWCG 3 cut(s) 1518, 2014, 2067
HpyCH4IV ACGT 5 cut(s) 1735, 2062, 2323, 2389, 4012
HpyF10VI GCNNNNNNNGC 7 cut(s) 43, 529, 2531, 3041, 3521, 4031, 4053
HpySE526I ACGT 5 cut(s) 1735, 2062, 2323, 2389, 4012
HspAI GCGC 6 cut(s) 46, 1446, 1610, 2532, 2872, 3042
Kpn2I TCCGGA 2 cut(s) 649, 1552
Ksp22I TGATCA 3 cut(s) 426, 3406, 3874
LguI GCTCTTC 1 cut(s) 705
LmnI GCTCC 3 cut(s) 2150, 3560, 3643
MaeI CTAG 8 cut(s) 1136, 1742, 1982, 2483, 2541, 3032, 3527, 4053
MaeII ACGT 5 cut(s) 1735, 2062, 2323, 2389, 4012
MflI RGATCY 3 cut(s) 599, 1262, 2438
MhlI GDGCHC 3 cut(s) 156, 2147, 2759
MlyI GAGTC 5 cut(s) 352, 1906, 2355, 3158, 3719
MmeI TCCRAC 3 cut(s) 496, 1753, 3674
Mph1103I ATGCAT 1 cut(s) 2481
MroI TCCGGA 2 cut(s) 649, 1552
MroXI GAANNNNTTC 3 cut(s) 15, 1303, 3735
MslI CAYNNNNRTG 9 cut(s) 69, 693, 909, 2172, 3238, 3321, 3817, 3900, 4015
MspA1I CMGCKG 1 cut(s) 3552
MspI CCGG 3 cut(s) 650, 1553, 2834
MspR9I CCNGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
Mva1269I GAATGC 4 cut(s) 566, 2421, 3848, 4022
MvaI CCWGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
MvnI CGCG 1 cut(s) 1458
MwoI GCNNNNNNNGC 7 cut(s) 43, 529, 2531, 3041, 3521, 4031, 4053
NdeI CATATG 2 cut(s) 1645, 3201
NlaIV GGNNCC 5 cut(s) 2292, 2691, 2974, 3556, 4071
NmuCI GTSAC 5 cut(s) 1159, 1879, 2536, 2608, 3593
NsbI TGCGCA 1 cut(s) 3043
NsiI ATGCAT 1 cut(s) 2481
NspI RCATGY 2 cut(s) 2872, 3120
NspV TTCGAA 2 cut(s) 1307, 1653
OliI CACNNNNGTG 2 cut(s) 3238, 3817
PaeR7I CTCGAG 2 cut(s) 2633, 3854
PagI TCATGA 3 cut(s) 1618, 1756, 3877
PaqCI CACCTGC 2 cut(s) 899, 4016
PasI CCCWGGG 1 cut(s) 1868
PceI AGGCCT 1 cut(s) 379
PciI ACATGT 1 cut(s) 3116
PciSI GCTCTTC 1 cut(s) 705
PcsI WCGNNNNNNNCGW 2 cut(s) 1840, 3183
PctI GAATGC 4 cut(s) 566, 2421, 3848, 4022
PdmI GAANNNNTTC 3 cut(s) 15, 1303, 3735
PfeI GAWTC 6 cut(s) 544, 1373, 2699, 3210, 3674, 3789
PflMI CCANNNNNTGG 1 cut(s) 2969
PfoI TCCNGGA 1 cut(s) 3429
PleI GAGTC 5 cut(s) 351, 1905, 2355, 3157, 3718
PmaCI CACGTG 1 cut(s) 4013
PmlI CACGTG 1 cut(s) 4013
PpsI GAGTC 5 cut(s) 351, 1905, 2355, 3157, 3718
Ppu21I YACGTR 1 cut(s) 4013
PpuMI RGGWCCY 2 cut(s) 1201, 2973
PscI ACATGT 1 cut(s) 3116
Psp124BI GAGCTC 2 cut(s) 2147, 2759
Psp5II RGGWCCY 2 cut(s) 1201, 2973
Psp6I CCWGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
PspCI CACGTG 1 cut(s) 4013
PspGI CCWGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
PspN4I GGNNCC 5 cut(s) 2292, 2691, 2974, 3556, 4071
PspPI GGNCC 8 cut(s) 1201, 1326, 2291, 2690, 2781, 2843, 2973, 3907
PspPPI RGGWCCY 2 cut(s) 1201, 2973
PspXI VCTCGAGB 1 cut(s) 2633
PstI CTGCAG 2 cut(s) 1342, 4027
PstNI CAGNNNCTG 1 cut(s) 110
PsuI RGATCY 3 cut(s) 599, 1262, 2438
RsaI GTAC 9 cut(s) 487, 805, 1639, 1857, 2128, 2212, 2596, 3067, 3495
RsaNI GTAC 9 cut(s) 486, 804, 1638, 1856, 2127, 2211, 2595, 3066, 3494
RseI CAYNNNNRTG 9 cut(s) 69, 693, 909, 2172, 3238, 3321, 3817, 3900, 4015
SacI GAGCTC 2 cut(s) 2147, 2759
SalI GTCGAC 2 cut(s) 503, 2008
SapI GCTCTTC 1 cut(s) 705
Sau96I GGNCC 8 cut(s) 1201, 1326, 2291, 2690, 2781, 2843, 2973, 3907
SbfI CCTGCAGG 1 cut(s) 4027
ScaI AGTACT 1 cut(s) 2128
SchI GAGTC 5 cut(s) 352, 1906, 2355, 3158, 3719
ScrFI CCNGG 7 cut(s) 39, 1860, 1869, 2223, 2451, 3275, 3431
SdaI CCTGCAGG 1 cut(s) 4027
SduI GDGCHC 3 cut(s) 156, 2147, 2759
SfcI CTRYAG 5 cut(s) 705, 1292, 1338, 3519, 4023
Sfr274I CTCGAG 2 cut(s) 2633, 3854
SfuI TTCGAA 2 cut(s) 1307, 1653
SinI GGWCC 5 cut(s) 1201, 1326, 2291, 2973, 3907
SlaI CTCGAG 2 cut(s) 2633, 3854
SmiMI CAYNNNNRTG 9 cut(s) 69, 693, 909, 2172, 3238, 3321, 3817, 3900, 4015
SmlI CTYRAG 5 cut(s) 461, 595, 1196, 2633, 3854
SmoI CTYRAG 5 cut(s) 461, 595, 1196, 2633, 3854
SpeI ACTAGT 1 cut(s) 2540
Sse8387I CCTGCAGG 1 cut(s) 4027
SseBI AGGCCT 1 cut(s) 379
SsiI CCGC 5 cut(s) 1417, 1458, 1544, 1892, 3552
SspI AATATT 5 cut(s) 828, 890, 1702, 1945, 3502
SspMI CTAG 8 cut(s) 1136, 1742, 1982, 2483, 2541, 3032, 3527, 4053
SstI GAGCTC 2 cut(s) 2147, 2759
StuI AGGCCT 1 cut(s) 379
StyD4I CCNGG 7 cut(s) 37, 1858, 1867, 2221, 2449, 3273, 3429
StyI CCWWGG 1 cut(s) 1669
TaiI ACGT 5 cut(s) 1738, 2065, 2326, 2392, 4015
TatI WGTACW 3 cut(s) 1637, 2126, 2210
TauI GCSGC 3 cut(s) 1420, 1895, 3555
TfiI GAWTC 6 cut(s) 544, 1373, 2699, 3210, 3674, 3789
TscAI CASTG 9 cut(s) 1339, 1793, 2534, 2656, 2974, 3386, 3776, 3853, 3965
TseFI GTSAC 5 cut(s) 1159, 1879, 2536, 2608, 3593
Tsp45I GTSAC 5 cut(s) 1159, 1879, 2536, 2608, 3593
TspGWI ACGGA 4 cut(s) 1733, 2574, 3320, 3899
TspRI CASTG 9 cut(s) 1339, 1793, 2534, 2656, 2974, 3386, 3776, 3853, 3965
Van91I CCANNNNNTGG 1 cut(s) 2969
VneI GTGCAC 1 cut(s) 152
VpaK11BI GGWCC 5 cut(s) 1201, 1326, 2291, 2973, 3907
XbaI TCTAGA 2 cut(s) 1135, 3526
XceI RCATGY 2 cut(s) 2872, 3120
XcmI CCANNNNNNNNNTGG 1 cut(s) 1384
XhoI CTCGAG 2 cut(s) 2633, 3854
XmiI GTMKAC 3 cut(s) 504, 2009, 2487
XmnI GAANNNNTTC 3 cut(s) 15, 1303, 3735
XspI CTAG 8 cut(s) 1136, 1742, 1982, 2483, 2541, 3032, 3527, 4053
ZrmI AGTACT 1 cut(s) 2128
Zsp2I ATGCAT 1 cut(s) 2481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.