resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 190 | 1.4e-44 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 6.4e-14 | TIR domain |
| NB-ARC | PF00931 | 206 - 373 | 5e-20 | NB-ARC domain |
| NACHT | PF05729 | 223 - 370 | 3.3e-10 | NACHT domain |
| WHD_ROQ1 | PF23282 | 443 - 514 | 5.4e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 852 - 914 | 2.3e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 854 - 911 | 9.3e-06 | Leucine rich repeat |
| C-JID | PF20160 | 1001 - 1139 | 1.6e-06 | C-JID domain |
| C-JID | PF20160 | 1503 - 1645 | 7.6e-10 | C-JID domain |
| C-JID | PF20160 | 1704 - 1839 | 3.1e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2867 |
| AarI | CACCTGC | 2 cut(s) | 2411, 5582 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4975 |
| Acc36I | ACCTGC | 6 cut(s) | 2271, 2411, 2481, 4027, 4227, 5582 |
| AccB1I | GGYRCC | 1 cut(s) | 267 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 692, 1126, 2168, 4550 |
| AccI | GTMKAC | 3 cut(s) | 1161, 2016, 4065 |
| AccII | CGCG | 2 cut(s) | 2970, 3395 |
| AccIII | TCCGGA | 2 cut(s) | 482, 3064 |
| AciI | CCGC | 7 cut(s) | 284, 733, 2899, 2970, 3393, 5777, 6054 |
| AcuI | CTGAAG | 1 cut(s) | 1092 |
| AdeI | CACNNNGTG | 1 cut(s) | 5545 |
| AflII | CTTAAG | 1 cut(s) | 1639 |
| AflIII | ACRYGT | 2 cut(s) | 4697, 6105 |
| AgeI | ACCGGT | 1 cut(s) | 3987 |
| AhlI | ACTAGT | 1 cut(s) | 4118 |
| AjiI | CACGTC | 2 cut(s) | 346, 3641 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 531, 563, 4242, 4274, 5330, 5362, 5957, 5989 |
| AleI | CACNNNNGTG | 3 cut(s) | 4819, 6025, 6108 |
| Alw21I | GWGCWC | 6 cut(s) | 1668, 3725, 3967, 6105, 6168, 6288 |
| Alw26I | GTCTC | 7 cut(s) | 310, 4286, 4737, 4913, 5432, 5946, 6218 |
| Alw44I | GTGCAC | 3 cut(s) | 1664, 6101, 6164 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1622, 4471 |
| Ama87I | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| Aor13HI | TCCGGA | 2 cut(s) | 482, 3064 |
| AoxI | GGCC | 7 cut(s) | 475, 1889, 2254, 2930, 4274, 4361, 4423 |
| ApaLI | GTGCAC | 3 cut(s) | 1664, 6101, 6164 |
| AsiGI | ACCGGT | 1 cut(s) | 3987 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 522, 1083, 1527, 2815 |
| AspLEI | GCGC | 3 cut(s) | 1560, 4112, 4455 |
| AspS9I | GGNCC | 8 cut(s) | 983, 3869, 4274, 4362, 4424, 4554, 5331, 5488 |
| AsuC2I | CCSGG | 2 cut(s) | 312, 313 |
| AsuII | TTCGAA | 2 cut(s) | 2819, 3326 |
| AvaI | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| AvaII | GGWCC | 5 cut(s) | 983, 3869, 4554, 5331, 5488 |
| BaeGI | GKGCMC | 4 cut(s) | 1668, 5682, 6105, 6168 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 1420, 1453, 3339, 3372, 5066, 5099, 5364, 5397 |
| BamHI | GGATCC | 1 cut(s) | 4016 |
| BanI | GGYRCC | 1 cut(s) | 267 |
| BanII | GRGCYC | 2 cut(s) | 312, 3725 |
| BauI | CACGAG | 3 cut(s) | 3960, 5394, 6021 |
| BbsI | GAAGAC | 5 cut(s) | 1169, 2718, 3148, 4250, 4694 |
| Bbv12I | GWGCWC | 6 cut(s) | 1668, 3725, 3967, 6105, 6168, 6288 |
| BbvCI | CCTCAGC | 1 cut(s) | 2895 |
| BceAI | ACGGC | 7 cut(s) | 2057, 2799, 3009, 3848, 4099, 4351, 6081 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 2516, 2550, 4367, 4401, 5416, 5450, 5669, 5703 |
| BciVI | GTATCC | 4 cut(s) | 2641, 2998, 3136, 5392 |
| BclI | TGATCA | 4 cut(s) | 1938, 4987, 5455, 6082 |
| BcnI | CCSGG | 2 cut(s) | 312, 313 |
| BcoDI | GTCTC | 7 cut(s) | 310, 4286, 4737, 4913, 5432, 5946, 6218 |
| BcuI | ACTAGT | 1 cut(s) | 4118 |
| BfmI | CTRYAG | 7 cut(s) | 945, 2217, 2804, 2850, 4278, 5100, 5589 |
| BfrI | CTTAAG | 1 cut(s) | 1639 |
| BfuAI | ACCTGC | 6 cut(s) | 2271, 2411, 2481, 4027, 4227, 5582 |
| BfuI | GTATCC | 4 cut(s) | 2641, 2998, 3136, 5392 |
| BglII | AGATCT | 1 cut(s) | 2111 |
| BmcAI | AGTACT | 2 cut(s) | 3034, 3706 |
| Bme18I | GGWCC | 5 cut(s) | 983, 3869, 4554, 5331, 5488 |
| BmeT110I | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| BmgBI | CACGTC | 2 cut(s) | 346, 3641 |
| BmgT120I | GGNCC | 8 cut(s) | 983, 3869, 4274, 4362, 4424, 4554, 5331, 5488 |
| BmiI | GGNNCC | 8 cut(s) | 269, 1204, 3870, 4018, 4275, 4555, 5137, 5637 |
| BpiI | GAAGAC | 5 cut(s) | 1169, 2718, 3148, 4250, 4694 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3712, 3744 |
| BpmI | CTGGAG | 4 cut(s) | 3720, 3783, 4748, 4877 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2895, 3812 |
| Bpu14I | TTCGAA | 2 cut(s) | 2819, 3326 |
| BpuEI | CTTGAG | 5 cut(s) | 188, 342, 1472, 1994, 2128 |
| BpuMI | CCSGG | 2 cut(s) | 312, 313 |
| Bsa29I | ATCGAT | 1 cut(s) | 976 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2919, 4986 |
| BsaI | GGTCTC | 1 cut(s) | 4913 |
| BsaJI | CCNNGG | 6 cut(s) | 47, 311, 686, 3864, 4471, 4557 |
| BsaWI | WCCGGW | 6 cut(s) | 374, 482, 3064, 3987, 4286, 4414 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 778, 808, 3781, 3811, 4955, 4985 |
| Bse118I | RCCGGY | 1 cut(s) | 3987 |
| Bse1I | ACTGG | 8 cut(s) | 2257, 3040, 3293, 3712, 4227, 5047, 5350, 6318 |
| Bse3DI | GCAATG | 5 cut(s) | 961, 2747, 3498, 5137, 5588 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2919, 4986 |
| BseAI | TCCGGA | 2 cut(s) | 482, 3064 |
| BseCI | ATCGAT | 1 cut(s) | 976 |
| BseDI | CCNNGG | 6 cut(s) | 47, 311, 686, 3864, 4471, 4557 |
| BseJI | GATNNNNATC | 2 cut(s) | 2919, 4986 |
| BseMI | GCAATG | 5 cut(s) | 961, 2747, 3498, 5137, 5588 |
| BseMII | CTCAG | 8 cut(s) | 59, 1844, 2001, 2364, 2708, 2717, 2909, 5154 |
| BseNI | ACTGG | 8 cut(s) | 2257, 3040, 3293, 3712, 4227, 5047, 5350, 6318 |
| BseRI | GAGGAG | 4 cut(s) | 10, 1548, 2423, 5128 |
| BseSI | GKGCMC | 4 cut(s) | 1668, 5682, 6105, 6168 |
| BsgI | GTGCAG | 2 cut(s) | 4055, 5941 |
| Bsh1236I | CGCG | 2 cut(s) | 2970, 3395 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4438 |
| BshFI | GGCC | 7 cut(s) | 477, 1891, 2256, 2932, 4276, 4363, 4425 |
| BshNI | GGYRCC | 1 cut(s) | 267 |
| BshTI | ACCGGT | 1 cut(s) | 3987 |
| BshVI | ATCGAT | 1 cut(s) | 976 |
| BsiEI | CGRYCG | 1 cut(s) | 4438 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1668, 3725, 3967, 6105, 6168, 6288 |
| BsiHKCI | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| BsiSI | CCGG | 8 cut(s) | 312, 375, 483, 2378, 3065, 3988, 4287, 4415 |
| BslFI | GGGAC | 8 cut(s) | 440, 1525, 1627, 2224, 2517, 3222, 4388, 5135 |
| BsmAI | GTCTC | 7 cut(s) | 310, 4286, 4737, 4913, 5432, 5946, 6218 |
| BsmBI | CGTCTC | 1 cut(s) | 6218 |
| BsmFI | GGGAC | 8 cut(s) | 440, 1525, 1627, 2224, 2517, 3222, 4388, 5135 |
| BsmI | GAATGC | 7 cut(s) | 2078, 2285, 3999, 4850, 5429, 5613, 6056 |
| BsnI | GGCC | 7 cut(s) | 477, 1891, 2256, 2932, 4276, 4363, 4425 |
| Bso31I | GGTCTC | 1 cut(s) | 4913 |
| BsoBI | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| Bsp119I | TTCGAA | 2 cut(s) | 2819, 3326 |
| Bsp1286I | GDGCHC | 8 cut(s) | 312, 1668, 3725, 3967, 5682, 6105, 6168, 6288 |
| Bsp13I | TCCGGA | 2 cut(s) | 482, 3064 |
| BspACI | CCGC | 7 cut(s) | 284, 733, 2899, 2970, 3393, 5777, 6054 |
| BspANI | GGCC | 7 cut(s) | 477, 1891, 2256, 2932, 4276, 4363, 4425 |
| BspCNI | CTCAG | 8 cut(s) | 60, 1845, 2002, 2363, 2707, 2716, 2908, 5153 |
| BspDI | ATCGAT | 1 cut(s) | 976 |
| BspEI | TCCGGA | 2 cut(s) | 482, 3064 |
| BspFNI | CGCG | 2 cut(s) | 2970, 3395 |
| BspHI | TCATGA | 3 cut(s) | 2670, 3130, 5458 |
| BspLI | GGNNCC | 8 cut(s) | 269, 1204, 3870, 4018, 4275, 4555, 5137, 5637 |
| BspMAI | CTGCAG | 2 cut(s) | 2854, 5593 |
| BspMI | ACCTGC | 6 cut(s) | 2271, 2411, 2481, 4027, 4227, 5582 |
| BspQI | GCTCTTC | 3 cut(s) | 1089, 1097, 2217 |
| BspT104I | TTCGAA | 2 cut(s) | 2819, 3326 |
| BspT107I | GGYRCC | 1 cut(s) | 267 |
| BspTI | CTTAAG | 1 cut(s) | 1639 |
| BspTNI | GGTCTC | 1 cut(s) | 4913 |
| BsrDI | GCAATG | 5 cut(s) | 961, 2747, 3498, 5137, 5588 |
| BsrFI | RCCGGY | 1 cut(s) | 3987 |
| BsrI | ACTGG | 8 cut(s) | 2257, 3040, 3293, 3712, 4227, 5047, 5350, 6318 |
| BssAI | RCCGGY | 1 cut(s) | 3987 |
| BssECI | CCNNGG | 6 cut(s) | 47, 311, 686, 3864, 4471, 4557 |
| BssNAI | GTATAC | 1 cut(s) | 4066 |
| BssSI | CACGAG | 3 cut(s) | 3960, 5394, 6021 |
| Bst1107I | GTATAC | 1 cut(s) | 4066 |
| Bst2BI | CACGAG | 3 cut(s) | 3960, 5394, 6021 |
| Bst6I | CTCTTC | 8 cut(s) | 1089, 1097, 2091, 2217, 3735, 4740, 5511, 6138 |
| BstAFI | CTTAAG | 1 cut(s) | 1639 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 5597 |
| BstBI | TTCGAA | 2 cut(s) | 2819, 3326 |
| BstC8I | GCNNGC | 7 cut(s) | 475, 683, 952, 1646, 2535, 4340, 4627 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 3864 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 116 |
| BstFNI | CGCG | 2 cut(s) | 2970, 3395 |
| BstHHI | GCGC | 3 cut(s) | 1560, 4112, 4455 |
| BstMAI | GTCTC | 7 cut(s) | 310, 4286, 4737, 4913, 5432, 5946, 6218 |
| BstMCI | CGRYCG | 1 cut(s) | 4438 |
| BstNSI | RCATGY | 7 cut(s) | 685, 1365, 1389, 4453, 4629, 4701, 6109 |
| BstSFI | CTRYAG | 7 cut(s) | 945, 2217, 2804, 2850, 4278, 5100, 5589 |
| BstSLI | GKGCMC | 4 cut(s) | 1668, 5682, 6105, 6168 |
| BstUI | CGCG | 2 cut(s) | 2970, 3395 |
| BstV2I | GAAGAC | 5 cut(s) | 1169, 2718, 3148, 4250, 4694 |
| BstX2I | RGATCY | 4 cut(s) | 2111, 3223, 4016, 4467 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 190, 4821, 5400, 6027 |
| BstYI | RGATCY | 4 cut(s) | 2111, 3223, 4016, 4467 |
| BstZ17I | GTATAC | 1 cut(s) | 4066 |
| Bsu15I | ATCGAT | 1 cut(s) | 976 |
| BsuI | GTATCC | 4 cut(s) | 2641, 2998, 3136, 5392 |
| BsuRI | GGCC | 7 cut(s) | 477, 1891, 2256, 2932, 4276, 4363, 4425 |
| BsuTUI | ATCGAT | 1 cut(s) | 976 |
| BtgI | CCRYGG | 2 cut(s) | 47, 3864 |
| BtgZI | GCGATG | 1 cut(s) | 3872 |
| BtrI | CACGTC | 2 cut(s) | 346, 3641 |
| BtsI | GCAGTG | 6 cut(s) | 1356, 2844, 4105, 4555, 5434, 5761 |
| BveI | ACCTGC | 6 cut(s) | 2271, 2411, 2481, 4027, 4227, 5582 |
| Cac8I | GCNNGC | 7 cut(s) | 475, 683, 952, 1646, 2535, 4340, 4627 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1622, 4471 |
| CciI | TCATGA | 3 cut(s) | 2670, 3130, 5458 |
| CfoI | GCGC | 3 cut(s) | 1560, 4112, 4455 |
| Cfr10I | RCCGGY | 1 cut(s) | 3987 |
| Cfr13I | GGNCC | 8 cut(s) | 983, 3869, 4274, 4362, 4424, 4554, 5331, 5488 |
| Cfr9I | CCCGGG | 1 cut(s) | 311 |
| ClaI | ATCGAT | 1 cut(s) | 976 |
| CspAI | ACCGGT | 1 cut(s) | 3987 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 5148, 5183 |
| DraI | TTTAAA | 2 cut(s) | 1797, 6151 |
| DraIII | CACNNNGTG | 1 cut(s) | 5545 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4975 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4975 |
| Eam1104I | CTCTTC | 8 cut(s) | 1089, 1097, 2091, 2217, 3735, 4740, 5511, 6138 |
| EarI | CTCTTC | 8 cut(s) | 1089, 1097, 2091, 2217, 3735, 4740, 5511, 6138 |
| Ecl136II | GAGCTC | 1 cut(s) | 3723 |
| Eco147I | AGGCCT | 1 cut(s) | 1891 |
| Eco24I | GRGCYC | 2 cut(s) | 312, 3725 |
| Eco31I | GGTCTC | 1 cut(s) | 4913 |
| Eco32I | GATATC | 1 cut(s) | 1790 |
| Eco47I | GGWCC | 5 cut(s) | 983, 3869, 4554, 5331, 5488 |
| Eco53kI | GAGCTC | 1 cut(s) | 3723 |
| Eco57I | CTGAAG | 1 cut(s) | 1092 |
| Eco88I | CYCGRG | 3 cut(s) | 311, 4211, 5435 |
| EcoICRI | GAGCTC | 1 cut(s) | 3723 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 116 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4274, 4554 |
| EcoRI | GAATTC | 3 cut(s) | 4397, 5345, 5972 |
| EcoRV | GATATC | 1 cut(s) | 1790 |
| EcoT22I | ATGCAT | 4 cut(s) | 1387, 1497, 4059, 6129 |
| EcoT38I | GRGCYC | 2 cut(s) | 312, 3725 |
| Esp3I | CGTCTC | 1 cut(s) | 6218 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 689, 721, 3213, 3245, 3295, 3327, 4242, 4274 |
| FaqI | GGGAC | 8 cut(s) | 440, 1525, 1627, 2224, 2517, 3222, 4388, 5135 |
| FauI | CCCGC | 1 cut(s) | 5784 |
| FauNDI | CATATG | 2 cut(s) | 3151, 4782 |
| FbaI | TGATCA | 4 cut(s) | 1938, 4987, 5455, 6082 |
| FblI | GTMKAC | 3 cut(s) | 1161, 2016, 4065 |
| FriOI | GRGCYC | 2 cut(s) | 312, 3725 |
| GlaI | GCGC | 3 cut(s) | 1559, 4111, 4454 |
| GsuI | CTGGAG | 4 cut(s) | 3720, 3783, 4748, 4877 |
| HaeIII | GGCC | 7 cut(s) | 477, 1891, 2256, 2932, 4276, 4363, 4425 |
| HapII | CCGG | 8 cut(s) | 312, 375, 483, 2378, 3065, 3988, 4287, 4415 |
| HhaI | GCGC | 3 cut(s) | 1560, 4112, 4455 |
| Hin6I | GCGC | 3 cut(s) | 1558, 4110, 4453 |
| HinP1I | GCGC | 3 cut(s) | 1558, 4110, 4453 |
| HincII | GTYRAC | 1 cut(s) | 2017 |
| HindII | GTYRAC | 1 cut(s) | 2017 |
| HindIII | AAGCTT | 6 cut(s) | 747, 1768, 2383, 4005, 4885, 5464 |
| HpaII | CCGG | 8 cut(s) | 312, 375, 483, 2378, 3065, 3988, 4287, 4415 |
| Hpy99I | CGWCG | 2 cut(s) | 3514, 3645 |
| HpyCH4IV | ACGT | 7 cut(s) | 345, 918, 3235, 3597, 3640, 3901, 3967 |
| HpySE526I | ACGT | 7 cut(s) | 345, 918, 3235, 3597, 3640, 3901, 3967 |
| HspAI | GCGC | 3 cut(s) | 1558, 4110, 4453 |
| Kpn2I | TCCGGA | 2 cut(s) | 482, 3064 |
| Ksp22I | TGATCA | 4 cut(s) | 1938, 4987, 5455, 6082 |
| LguI | GCTCTTC | 3 cut(s) | 1089, 1097, 2217 |
| LmnI | GCTCC | 4 cut(s) | 2410, 5141, 5224, 5848 |
| MaeII | ACGT | 7 cut(s) | 345, 918, 3235, 3597, 3640, 3901, 3967 |
| MflI | RGATCY | 4 cut(s) | 2111, 3223, 4016, 4467 |
| MhlI | GDGCHC | 8 cut(s) | 312, 1668, 3725, 3967, 5682, 6105, 6168, 6288 |
| MlyI | GAGTC | 9 cut(s) | 312, 656, 1547, 1864, 3406, 3933, 4739, 5300, 5948 |
| MmeI | TCCRAC | 7 cut(s) | 171, 630, 751, 1079, 2008, 3253, 5255 |
| Mph1103I | ATGCAT | 4 cut(s) | 1387, 1497, 4059, 6129 |
| MroI | TCCGGA | 2 cut(s) | 482, 3064 |
| MroXI | GAANNNNTTC | 4 cut(s) | 522, 1083, 1527, 2815 |
| MspA1I | CMGCKG | 1 cut(s) | 2899 |
| MspCI | CTTAAG | 1 cut(s) | 1639 |
| MspI | CCGG | 8 cut(s) | 312, 375, 483, 2378, 3065, 3988, 4287, 4415 |
| MssI | GTTTAAAC | 1 cut(s) | 6151 |
| Mva1269I | GAATGC | 7 cut(s) | 2078, 2285, 3999, 4850, 5429, 5613, 6056 |
| MvnI | CGCG | 2 cut(s) | 2970, 3395 |
| NciI | CCSGG | 2 cut(s) | 312, 313 |
| NdeI | CATATG | 2 cut(s) | 3151, 4782 |
| NlaIV | GGNNCC | 8 cut(s) | 269, 1204, 3870, 4018, 4275, 4555, 5137, 5637 |
| NmuCI | GTSAC | 7 cut(s) | 346, 439, 1922, 3379, 4114, 5545, 5767 |
| NsiI | ATGCAT | 4 cut(s) | 1387, 1497, 4059, 6129 |
| NspI | RCATGY | 7 cut(s) | 685, 1365, 1389, 4453, 4629, 4701, 6109 |
| NspV | TTCGAA | 2 cut(s) | 2819, 3326 |
| OliI | CACNNNNGTG | 3 cut(s) | 4819, 6025, 6108 |
| PaeI | GCATGC | 2 cut(s) | 685, 4629 |
| PaeR7I | CTCGAG | 2 cut(s) | 4211, 5435 |
| PagI | TCATGA | 3 cut(s) | 2670, 3130, 5458 |
| PaqCI | CACCTGC | 2 cut(s) | 2411, 5582 |
| PceI | AGGCCT | 1 cut(s) | 1891 |
| PciI | ACATGT | 2 cut(s) | 4697, 6105 |
| PciSI | GCTCTTC | 3 cut(s) | 1089, 1097, 2217 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 3196, 3340, 4252, 6233 |
| PctI | GAATGC | 7 cut(s) | 2078, 2285, 3999, 4850, 5429, 5613, 6056 |
| PdmI | GAANNNNTTC | 4 cut(s) | 522, 1083, 1527, 2815 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 692, 1126, 2168, 4550 |
| PfoI | TCCNGGA | 1 cut(s) | 5010 |
| PinAI | ACCGGT | 1 cut(s) | 3987 |
| PleI | GAGTC | 9 cut(s) | 312, 655, 1546, 1863, 3405, 3933, 4738, 5299, 5947 |
| PmeI | GTTTAAAC | 1 cut(s) | 6151 |
| PpsI | GAGTC | 9 cut(s) | 312, 655, 1546, 1863, 3405, 3933, 4738, 5299, 5947 |
| PpuMI | RGGWCCY | 1 cut(s) | 4554 |
| PscI | ACATGT | 2 cut(s) | 4697, 6105 |
| PsiI | TTATAA | 1 cut(s) | 2867 |
| Psp124BI | GAGCTC | 1 cut(s) | 3725 |
| Psp5II | RGGWCCY | 1 cut(s) | 4554 |
| PspN4I | GGNNCC | 8 cut(s) | 269, 1204, 3870, 4018, 4275, 4555, 5137, 5637 |
| PspPI | GGNCC | 8 cut(s) | 983, 3869, 4274, 4362, 4424, 4554, 5331, 5488 |
| PspPPI | RGGWCCY | 1 cut(s) | 4554 |
| PspXI | VCTCGAGB | 1 cut(s) | 4211 |
| PstI | CTGCAG | 2 cut(s) | 2854, 5593 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1622, 4471 |
| PsuI | RGATCY | 4 cut(s) | 2111, 3223, 4016, 4467 |
| SacI | GAGCTC | 1 cut(s) | 3725 |
| SalI | GTCGAC | 1 cut(s) | 2015 |
| SapI | GCTCTTC | 3 cut(s) | 1089, 1097, 2217 |
| Sau96I | GGNCC | 8 cut(s) | 983, 3869, 4274, 4362, 4424, 4554, 5331, 5488 |
| SbfI | CCTGCAGG | 1 cut(s) | 5593 |
| ScaI | AGTACT | 2 cut(s) | 3034, 3706 |
| SchI | GAGTC | 9 cut(s) | 312, 656, 1547, 1864, 3406, 3933, 4739, 5300, 5948 |
| SdaI | CCTGCAGG | 1 cut(s) | 5593 |
| SduI | GDGCHC | 8 cut(s) | 312, 1668, 3725, 3967, 5682, 6105, 6168, 6288 |
| SfcI | CTRYAG | 7 cut(s) | 945, 2217, 2804, 2850, 4278, 5100, 5589 |
| Sfr274I | CTCGAG | 2 cut(s) | 4211, 5435 |
| SfuI | TTCGAA | 2 cut(s) | 2819, 3326 |
| SinI | GGWCC | 5 cut(s) | 983, 3869, 4554, 5331, 5488 |
| SlaI | CTCGAG | 2 cut(s) | 4211, 5435 |
| SmaI | CCCGGG | 1 cut(s) | 313 |
| SmlI | CTYRAG | 8 cut(s) | 167, 357, 1451, 1639, 1973, 2107, 4211, 5435 |
| SmoI | CTYRAG | 8 cut(s) | 167, 357, 1451, 1639, 1973, 2107, 4211, 5435 |
| SpeI | ACTAGT | 1 cut(s) | 4118 |
| SphI | GCATGC | 2 cut(s) | 685, 4629 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 5593 |
| SseBI | AGGCCT | 1 cut(s) | 1891 |
| SsiI | CCGC | 7 cut(s) | 284, 733, 2899, 2970, 3393, 5777, 6054 |
| SspI | AATATT | 5 cut(s) | 1347, 1460, 2340, 3445, 5700 |
| SstI | GAGCTC | 1 cut(s) | 3725 |
| StuI | AGGCCT | 1 cut(s) | 1891 |
| TaiI | ACGT | 7 cut(s) | 348, 921, 3238, 3600, 3643, 3904, 3970 |
| TaqII | GACCGA | 2 cut(s) | 971, 5830 |
| TatI | WGTACW | 4 cut(s) | 3032, 3538, 3560, 3704 |
| TauI | GCSGC | 1 cut(s) | 3395 |
| TseFI | GTSAC | 7 cut(s) | 346, 439, 1922, 3379, 4114, 5545, 5767 |
| Tsp45I | GTSAC | 7 cut(s) | 346, 439, 1922, 3379, 4114, 5545, 5767 |
| TspGWI | ACGGA | 6 cut(s) | 64, 3233, 4152, 4901, 5480, 6242 |
| TspMI | CCCGGG | 1 cut(s) | 311 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 692, 1126, 2168, 4550 |
| Vha464I | CTTAAG | 1 cut(s) | 1639 |
| VneI | GTGCAC | 3 cut(s) | 1664, 6101, 6164 |
| VpaK11BI | GGWCC | 5 cut(s) | 983, 3869, 4554, 5331, 5488 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 116 |
| XbaI | TCTAGA | 4 cut(s) | 2647, 5107, 5731, 5935 |
| XceI | RCATGY | 7 cut(s) | 685, 1365, 1389, 4453, 4629, 4701, 6109 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1127 |
| XhoI | CTCGAG | 2 cut(s) | 4211, 5435 |
| XmaI | CCCGGG | 1 cut(s) | 311 |
| XmiI | GTMKAC | 3 cut(s) | 1161, 2016, 4065 |
| XmnI | GAANNNNTTC | 4 cut(s) | 522, 1083, 1527, 2815 |
| ZrmI | AGTACT | 2 cut(s) | 3034, 3706 |
| Zsp2I | ATGCAT | 4 cut(s) | 1387, 1497, 4059, 6129 |