RchiOBHm_Chr1g0337721

Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
29641018 .. 29643418
2401 bp
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UTR
Exon/CDS
Intron
PRQ56560

Sequence Viewer

Length: 1503 bp
ATGGGAAATTCAATCAAACTGTCAGCCAAGGAGGTAGTACCTTCAGGAGTCATGCTGGTGTTGAGAGCCAAATCTGCAACAAGAAAGGTCATACTGCCAGGAATTGCTATCAAAACACAGAATGTCAAATTTGTCATAAGAAGGGTCATATTGCTAGCAAGTGCTTCCAGAATCCACTCAATAACAACAATGGTGAATATAGGAACAACAGTGGGATATCACCTAAGTTGTCAAATCTGTAGGAAGAAAGGCCACACTGCTGAAAATTGCTTCTACAGGGTTGACATCCCTCCTAATCATATCTCTAACTCTGTGATCATTTGTCAAATCTATGGTCTGAAGGGACATGCAGCCTTGGACTGCCATCACAGGTCAAACTATGCATTTCAAGGAGCTGAACCTCCTTCTACTCTTGCTGCAATGACTGTGCATAATATCAATGGAGCTAGTTCTTCTAGTGTTTCTATTACTGCACAGGGTTTTCCATATGTAGGTACTAGTTCTCCTCGTCCTTCTTTTAGTCCGGATCAGTCACAAGTTATTCTTCCTCTCTGTTCTGCTCTGGATAACTCTCTTGACACCCACATTGGTGTTTCTCCTGCTGTGGTTGATGGGGGAGATCAGAATGTGATAAATAATGATCAAGCTGATGCACAGTTGGTGGAGTGTGATTCTAGTGCAGAGCTGCTGAACCAGAAGTTGAAGATTGGTGTCGTGTTATCTGGAGGCCATGCACCTGGAGGTCACAATGTGATTTCTGGAATTTTCAATTACTTGCAAGATCACGCCAAAGGGAGCACGATGTATGGTTTCAGAGGTGGACCTGCTGGTTTCATGAAATGCAAATACGTTGAGCTTACACCGGAGTATGTTTATCCATATAGAAATCAAGGTGGTTTTGATATGATTTGTAGTGGAAGAGACAAGATTGAAACTCCAGAGCAGTTTAAGCAAGCACATGAGACAGCTGTGAAGCTTGATTTGGATGGTCTTGTTGTGATTGGAGGAGATGACTCAAACGGTGTTATACTTATTCCTGAAGGTCTTATTGACTTCATTCCTGAGGTACAGGGGCTTATTGCTGAATTGAATGAAATTCTGCCCCATGATGTTGTAGATGGAGATGGGTTGTGGAAAAAGAAACTCACAAGTCAGTCTCTACAGCTTTTTGACTTACCTTGTGAACAATTTGATCCAAGAAGAAGTCCGATTTATGAGAATTTCATGCTTACCAAAGCCAAATGTTTGAGTATCAAGAAGAAGACATTTCAAGATTTTTGTGCCTTAATTCATAGAACTAGTGTTGATACATCAAGAACTGGTACGCAAAACTTTTTCATGTTGTTAGAGAGTGAGTGTAATGGTATGATCTGTTACTTCATTATGTTCCTTCTTCTGAGCATACTCCAGCTTTTGAGTATACTGCATATGGTCTTACGAAGGGGTTACACTAGCTCAGTTGTCACGTGTCAGTACACATTGCTCCAATCTCAGTTTGGTTAA

Protein Analysis

500

Amino Acids

54.64

Weight (kDa)

7.21

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 235 - 340 1.1e-12 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 832
AccI GTMKAC 1 cut(s) 1420
AccIII TCCGGA 1 cut(s) 523
AclWI GGATC 2 cut(s) 534, 1187
AcsI RAATTY 5 cut(s) 7, 128, 762, 1095, 1219
AcuI CTGAAG 3 cut(s) 27, 359, 1059
AcvI CACGTG 1 cut(s) 1467
AdeI CACNNNGTG 1 cut(s) 751
AfaI GTAC 5 cut(s) 39, 496, 1068, 1324, 1475
AfiI CCNNNNNNNGG 1 cut(s) 491
AflIII ACRYGT 1 cut(s) 1466
AgsI TTSAA 7 cut(s) 12, 389, 703, 769, 932, 1090, 1271
AhlI ACTAGT 2 cut(s) 497, 1298
AjnI CCWGG 2 cut(s) 97, 736
AjuI GAANNNNNNNTTGG 2 cut(s) 965, 997
AleI CACNNNNGTG 1 cut(s) 588
Alw21I GWGCWC 1 cut(s) 800
Alw26I GTCTC 3 cut(s) 915, 956, 1161
AlwI GGATC 2 cut(s) 534, 1187
Aor13HI TCCGGA 1 cut(s) 523
AoxI GGCC 2 cut(s) 250, 727
ApeKI GCWGC 3 cut(s) 350, 416, 685
ApoI RAATTY 5 cut(s) 7, 128, 762, 1095, 1219
ArsI GACNNNNNNTTYG 2 cut(s) 319, 351
AspS9I GGNCC 1 cut(s) 821
AsuHPI GGTGA 2 cut(s) 205, 212
AsuNHI GCTAGC 1 cut(s) 154
AvaII GGWCC 1 cut(s) 821
AxyI CCTNAGG 1 cut(s) 1062
BbrPI CACGTG 1 cut(s) 1467
BbsI GAAGAC 1 cut(s) 1268
Bbv12I GWGCWC 1 cut(s) 800
BbvI GCAGC 3 cut(s) 362, 403, 672
BccI CCATC 5 cut(s) 372, 605, 980, 1112, 1118
BciT130I CCWGG 2 cut(s) 99, 738
BclI TGATCA 2 cut(s) 315, 640
BcoDI GTCTC 3 cut(s) 915, 956, 1161
BcuI ACTAGT 2 cut(s) 497, 1298
BfaI CTAG 7 cut(s) 155, 447, 456, 498, 675, 1299, 1452
BfmI CTRYAG 3 cut(s) 238, 274, 1160
BfuAI ACCTGC 1 cut(s) 832
BisI GCNGC 3 cut(s) 351, 417, 686
BlsI GCNGC 3 cut(s) 352, 418, 687
Bme1390I CCNGG 2 cut(s) 99, 738
Bme18I GGWCC 1 cut(s) 821
BmgT120I GGNCC 1 cut(s) 821
BmrFI CCNGG 2 cut(s) 99, 738
BmsI GCATC 1 cut(s) 640
BmtI GCTAGC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 1268
BpmI CTGGAG 4 cut(s) 744, 759, 921, 1391
BsaAI YACGTR 1 cut(s) 1467
BsaJI CCNNGG 2 cut(s) 27, 354
BsaWI WCCGGW 2 cut(s) 523, 862
BsaXI ACNNNNNCTCC 2 cut(s) 487, 517
Bsc4I CCNNNNNNNGG 1 cut(s) 491
Bse1I ACTGG 1 cut(s) 1324
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 2 cut(s) 426, 1478
BseAI TCCGGA 1 cut(s) 523
BseBI CCWGG 2 cut(s) 99, 738
BseDI CCNNGG 2 cut(s) 27, 354
BseGI GGATG 2 cut(s) 285, 991
BseLI CCNNNNNNNGG 1 cut(s) 491
BseMI GCAATG 2 cut(s) 426, 1478
BseMII CTCAG 3 cut(s) 1053, 1388, 1470
BseNI ACTGG 1 cut(s) 1324
BseRI GAGGAG 2 cut(s) 495, 1020
BseXI GCAGC 3 cut(s) 362, 403, 672
BsgI GTGCAG 2 cut(s) 456, 699
BshFI GGCC 2 cut(s) 252, 729
BsiHKAI GWGCWC 1 cut(s) 800
BsiSI CCGG 2 cut(s) 524, 863
BslFI GGGAC 1 cut(s) 357
BslI CCNNNNNNNGG 1 cut(s) 491
BsmAI GTCTC 3 cut(s) 915, 956, 1161
BsmFI GGGAC 1 cut(s) 357
BsnI GGCC 2 cut(s) 252, 729
Bsp1286I GDGCHC 1 cut(s) 800
Bsp13I TCCGGA 1 cut(s) 523
Bsp143I GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
BspANI GGCC 2 cut(s) 252, 729
BspCNI CTCAG 3 cut(s) 1054, 1389, 1469
BspEI TCCGGA 1 cut(s) 523
BspHI TCATGA 1 cut(s) 834
BspMI ACCTGC 1 cut(s) 832
BspOI GCTAGC 1 cut(s) 158
BspPI GGATC 2 cut(s) 534, 1187
BsrDI GCAATG 2 cut(s) 426, 1478
BsrI ACTGG 1 cut(s) 1324
BssECI CCNNGG 2 cut(s) 27, 354
BssMI GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
BssNAI GTATAC 1 cut(s) 1421
BssT1I CCWWGG 2 cut(s) 27, 354
Bst1107I GTATAC 1 cut(s) 1421
Bst2UI CCWGG 2 cut(s) 99, 738
Bst4CI ACNGT 5 cut(s) 21, 211, 427, 657, 1022
Bst6I CTCTTC 1 cut(s) 913
BstBAI YACGTR 1 cut(s) 1467
BstC8I GCNNGC 2 cut(s) 156, 954
BstDEI CTNAG 5 cut(s) 224, 1062, 1397, 1456, 1491
BstF5I GGATG 2 cut(s) 285, 991
BstKTI GATC 7 cut(s) 318, 529, 622, 643, 784, 1195, 1371
BstMAI GTCTC 3 cut(s) 915, 956, 1161
BstMBI GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
BstMWI GCNNNNNNNGC 2 cut(s) 74, 949
BstNI CCWGG 2 cut(s) 99, 738
BstNSI RCATGY 1 cut(s) 350
BstSCI CCNGG 2 cut(s) 97, 736
BstSFI CTRYAG 3 cut(s) 238, 274, 1160
BstV1I GCAGC 3 cut(s) 362, 403, 672
BstV2I GAAGAC 1 cut(s) 1268
BstXI CCANNNNNNTGG 1 cut(s) 737
BstZ17I GTATAC 1 cut(s) 1421
Bsu36I CCTNAGG 1 cut(s) 1062
BsuRI GGCC 2 cut(s) 252, 729
BtsCI GGATG 2 cut(s) 285, 991
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 2 cut(s) 216, 255
BveI ACCTGC 1 cut(s) 832
Cac8I GCNNGC 2 cut(s) 156, 954
CciI TCATGA 1 cut(s) 834
Cfr13I GGNCC 1 cut(s) 821
Csp6I GTAC 5 cut(s) 38, 495, 1067, 1323, 1474
CviAII CATG 8 cut(s) 52, 347, 731, 835, 959, 1106, 1225, 1339
CviQI GTAC 5 cut(s) 38, 495, 1067, 1323, 1474
DdeI CTNAG 5 cut(s) 224, 1062, 1397, 1456, 1491
DpnI GATC 7 cut(s) 317, 528, 621, 642, 783, 1194, 1370
DpnII GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
DraIII CACNNNGTG 1 cut(s) 751
Eam1104I CTCTTC 1 cut(s) 913
EarI CTCTTC 1 cut(s) 913
Eco130I CCWWGG 2 cut(s) 27, 354
Eco32I GATATC 1 cut(s) 218
Eco47I GGWCC 1 cut(s) 821
Eco57I CTGAAG 3 cut(s) 27, 359, 1059
Eco72I CACGTG 1 cut(s) 1467
Eco81I CCTNAGG 1 cut(s) 1062
EcoRII CCWGG 2 cut(s) 97, 736
EcoRV GATATC 1 cut(s) 218
EcoT14I CCWWGG 2 cut(s) 27, 354
EcoT22I ATGCAT 1 cut(s) 385
ErhI CCWWGG 2 cut(s) 27, 354
FaeI CATG 8 cut(s) 55, 350, 734, 838, 962, 1109, 1228, 1342
FalI AAGNNNNNCTT 2 cut(s) 528, 560
FaqI GGGAC 1 cut(s) 357
FatI CATG 8 cut(s) 51, 346, 730, 834, 958, 1105, 1224, 1338
FauNDI CATATG 2 cut(s) 487, 1428
FbaI TGATCA 2 cut(s) 315, 640
FblI GTMKAC 1 cut(s) 1420
Fnu4HI GCNGC 3 cut(s) 351, 417, 686
FokI GGATG 2 cut(s) 272, 998
Fsp4HI GCNGC 3 cut(s) 351, 417, 686
FspBI CTAG 7 cut(s) 155, 447, 456, 498, 675, 1299, 1452
GluI GCNGC 3 cut(s) 351, 417, 686
GsuI CTGGAG 4 cut(s) 744, 759, 921, 1391
HaeIII GGCC 2 cut(s) 252, 729
HapII CCGG 2 cut(s) 524, 863
Hin1II CATG 8 cut(s) 55, 350, 734, 838, 962, 1109, 1228, 1342
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 1 cut(s) 974
HinfI GANTC 4 cut(s) 48, 171, 671, 1013
HpaII CCGG 2 cut(s) 524, 863
HphI GGTGA 2 cut(s) 205, 212
Hpy166II GTNNAC 5 cut(s) 283, 821, 1184, 1421, 1476
Hpy188I TCNGA 5 cut(s) 339, 624, 815, 1209, 1398
Hpy8I GTNNAC 5 cut(s) 283, 821, 1184, 1421, 1476
HpyAV CCTTC 8 cut(s) 51, 135, 334, 414, 522, 1034, 1400, 1434
HpyCH4III ACNGT 5 cut(s) 21, 211, 427, 657, 1022
HpyCH4IV ACGT 2 cut(s) 849, 1466
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 949
HpyF3I CTNAG 5 cut(s) 224, 1062, 1397, 1456, 1491
HpySE526I ACGT 2 cut(s) 849, 1466
Hsp92II CATG 8 cut(s) 55, 350, 734, 838, 962, 1109, 1228, 1342
Kpn2I TCCGGA 1 cut(s) 523
Ksp22I TGATCA 2 cut(s) 315, 640
Kzo9I GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
LmnI GCTCC 4 cut(s) 392, 443, 795, 1488
Lsp1109I GCAGC 3 cut(s) 362, 403, 672
LweI GCATC 1 cut(s) 640
MaeI CTAG 7 cut(s) 155, 447, 456, 498, 675, 1299, 1452
MaeII ACGT 2 cut(s) 849, 1466
MaeIII GTNAC 5 cut(s) 531, 743, 1373, 1445, 1462
MalI GATC 7 cut(s) 317, 528, 621, 642, 783, 1194, 1370
MboI GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
MboII GAAGA 9 cut(s) 256, 444, 536, 715, 930, 1212, 1270, 1273, 1385
MhlI GDGCHC 1 cut(s) 800
MlyI GAGTC 2 cut(s) 57, 1007
Mph1103I ATGCAT 1 cut(s) 385
MroI TCCGGA 1 cut(s) 523
MseI TTAA 3 cut(s) 948, 1286, 1501
MslI CAYNNNNRTG 2 cut(s) 56, 588
MspA1I CMGCKG 1 cut(s) 968
MspI CCGG 2 cut(s) 524, 863
MspR9I CCNGG 2 cut(s) 99, 738
MvaI CCWGG 2 cut(s) 99, 738
MwoI GCNNNNNNNGC 2 cut(s) 74, 949
NdeI CATATG 2 cut(s) 487, 1428
NdeII GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 8 cut(s) 55, 350, 734, 838, 962, 1109, 1228, 1342
NmuCI GTSAC 3 cut(s) 531, 743, 1462
NsiI ATGCAT 1 cut(s) 385
NspI RCATGY 1 cut(s) 350
OliI CACNNNNGTG 1 cut(s) 588
PagI TCATGA 1 cut(s) 834
PfeI GAWTC 2 cut(s) 171, 671
PkrI GCNGC 3 cut(s) 352, 418, 687
PleI GAGTC 2 cut(s) 56, 1007
PmaCI CACGTG 1 cut(s) 1467
PmlI CACGTG 1 cut(s) 1467
PpsI GAGTC 2 cut(s) 56, 1007
Ppu21I YACGTR 1 cut(s) 1467
Psp6I CCWGG 2 cut(s) 97, 736
PspCI CACGTG 1 cut(s) 1467
PspGI CCWGG 2 cut(s) 97, 736
PspPI GGNCC 1 cut(s) 821
PvuII CAGCTG 1 cut(s) 968
RsaI GTAC 5 cut(s) 39, 496, 1068, 1324, 1475
RsaNI GTAC 5 cut(s) 38, 495, 1067, 1323, 1474
RseI CAYNNNNRTG 2 cut(s) 56, 588
SaqAI TTAA 3 cut(s) 948, 1286, 1501
SatI GCNGC 3 cut(s) 351, 417, 686
Sau3AI GATC 7 cut(s) 315, 526, 619, 640, 781, 1192, 1368
Sau96I GGNCC 1 cut(s) 821
SchI GAGTC 2 cut(s) 57, 1007
ScrFI CCNGG 2 cut(s) 99, 738
SduI GDGCHC 1 cut(s) 800
SfaNI GCATC 1 cut(s) 640
SfcI CTRYAG 3 cut(s) 238, 274, 1160
SinI GGWCC 1 cut(s) 821
SmiMI CAYNNNNRTG 2 cut(s) 56, 588
SpeI ACTAGT 2 cut(s) 497, 1298
SspMI CTAG 7 cut(s) 155, 447, 456, 498, 675, 1299, 1452
StyD4I CCNGG 2 cut(s) 97, 736
StyI CCWWGG 2 cut(s) 27, 354
TaaI ACNGT 5 cut(s) 21, 211, 427, 657, 1022
TaiI ACGT 2 cut(s) 852, 1469
TatI WGTACW 1 cut(s) 1473
TfiI GAWTC 2 cut(s) 171, 671
Tru1I TTAA 3 cut(s) 948, 1286, 1501
Tru9I TTAA 3 cut(s) 948, 1286, 1501
TscAI CASTG 2 cut(s) 216, 262
TseFI GTSAC 3 cut(s) 531, 743, 1462
TseI GCWGC 3 cut(s) 350, 416, 685
Tsp45I GTSAC 3 cut(s) 531, 743, 1462
TspDTI ATGAA 8 cut(s) 823, 851, 1045, 1107, 1213, 1280, 1327, 1369
TspRI CASTG 2 cut(s) 216, 262
VpaK11BI GGWCC 1 cut(s) 821
XapI RAATTY 5 cut(s) 7, 128, 762, 1095, 1219
XceI RCATGY 1 cut(s) 350
XcmI CCANNNNNNNNNTGG 1 cut(s) 1493
XmiI GTMKAC 1 cut(s) 1420
XspI CTAG 7 cut(s) 155, 447, 456, 498, 675, 1299, 1452
Zsp2I ATGCAT 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.