Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001357

Physical Location & Seq

Genomic Coordinates Reverse (-)

95394660 .. 95399744

Gene Structure 5085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00074370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGAGTCCCTCATTGGTTGCAAACGGCGGCGCTTCGTCTCCGGCGCCGGTCTCCGGCCGCGTCTCCTCCGTTTACAGCGAGGTCCAGTCGAGCCGTATCGACCACGAGCTTCCTCTCCCCTCGGTGCTCAAAAAGCCGTTCAAGCTCGTCGACGGACCTGCTAGCTCCGCCGCCGGCAATCCAGAGGAGATCGCGAAGCTGTTTCCCAATGTTTTCGGTCAGCCTTCTTCACAGTTGGTGGAGTGTGATTCCAGTGCAGAGCTGCCGAACCAGAAGTTGAAGATTGGTGTGGTGTTGTCTGGAGGCCAAGCACCTGGAGGTCACAATGTGATTTCTGGAATTTTCGATTACTTGCAAGATCGCGCCAAAGGGAGCACGATGTATGGTTTCAGAGGTGGACCTGCTGGTATCATGAAATGCAAATACGTTGAGCTTACACCGGAGTATGTTTATCCATACAGAAATCAGGGTGGTTTTGATATGATTTGTAGTGGAAGAGACAAGATTGAAACTCCAGAGCAGTTTAAGCAAGCACAAGAGACAGCTCTGAAGCTTGAGTTGGATGGTCTTGTTGTTATTGGAGGTGATGACTCAAACACAAATGCGTGCCTCCTTGCTGAAAACTTTAAGGGACTGAACTTGAAAACTCGGGTGATAGGTTGCCCAAAAACTATTGATGGTGATTTGAAATGTAAAGAGGTCCCCACAAGTTTCGGGTTCGATACGGCTTGCAAGATATATTCAGAAATGATTGGCAATGTCATGATAGATGCCCGGTCAACCGGAAAATATTATCATTTTGTACGGCTTATGGGGCGTGCAGCTTCACACATTACATTAGAGTGTGCTTTGCAAACTCATCCAAATATCACAATTATTGGAGAAGAGGTGCAGGGGCTTATTGCTGAATTGAATGAAATTCTGGCCCGTGATGTTGATCAGTTGATGCTCGAAAGGGATCCTCATGGAAATGTTCAGGTTGCCAAGATAGAAACAGAGAAGATGCTTTTCCAAATGGTTGAGGCTGACTTGGCAAAGAGGAAGCAGGAAGGCTCATACCATGGCCAATTCCAAGGAAAATCTCACTTTTTCGGGTATGAAGGAAGATGTGGTTTACCAACAAACTTTGACGCGAACTACTGCTATGCATTGGGTTATGCTGCTGGAGCTCTCCTTCATGGTGGAAAAACTGGATTGATATCATCGGTTAACAATTTGGCTGCTCCTGTTGAAGAATGGACAGTTGGTGGCACCGCGTTGACTTCATTGATGGACGTGGAGAGGAGACACGGTAAGTTCAAGCCTGTGATCAAGAAGGCAATGGTAGAACTTGAAGCTGCACCATTCAAGAAATTTGCATCTCTGAGGAACGAGTGGGCTATCAAGAATCGTTACATCAGTCCTGGTCCCATTCAATTTTTCGGCCCAGCTTCCAATTCCCTTAGTCACACTCTAATGTTGGAACTTGGGCTCGAAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008443 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0015979 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0042221 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0046835 GO:0047334 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00051 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00051 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PFK

Protein Analysis

493

Amino Acids

53.5

Weight (kDa)

6.29

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PFK	PF00365	94 - 389	6.6e-37	Phosphofructokinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12000
fragaria_vesca	FvH4_3g01360 FvH4_3g01360 FvH4_3g22340 FvH4_5g38692
malus_domestica	MD05G1352800.v1.1 MD05G1354700.v1.1 MD05G1354900.v1.1 MD08G1183700.v1.1 MD09G1228400.v1.1 MD10G1133500.v1.1 MD10G1327400.v1.1 MD12G1211800.v1.1 MD13G1182600.v1.1 MD17G1176400.v1.1 MD17G1211800.v1.1
prunus_persica	Prupe.4G014600_v2.0.a1 Prupe.4G014600_v2.0.a1 Prupe.4G014600_v2.0.a1
pyrus_communis	pycom01g09830 pycom05g15580 pycom05g32000 pycom10g04820 pycom10g27690 pycom111g03470 pycom12g06510 pycom14g19720 pycom15g20870 pycom15g34000 pycom17g07230 pycom17g26290
rosa_chinensis	RchiOBHm_Chr1g0337721 RchiOBHm_Chr2g0111881 RchiOBHm_Chr2g0137981 RchiOBHm_Chr4g0422781 RchiOBHm_Chr5g0001981 RchiOBHm_Chr6g0245811 RchiOBHm_Chr7g0178941
rosa_laevigata	RLG00000030986
rosa_multiflora	Rmu_co8429625.1_g000001 Rmu_sc0000378.1_g000018 Rmu_sc0006008.1_g000007
rosa_roxburghii	Rroxscaffold_1G00071370 Rroxscaffold_1G00074370 Rroxscaffold_4G00281720
rosa_rugosa	Rorug02G0348600 Rorug04G0394100 Rorug04G0394200
rosa_samantha	Rh1AG166900 Rh2BG004000 Rh5CG016600 Rh5DG017200
rosa_wichuraiana	Rw5G001500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	166, 409
AccB1I	GGYRCC	2 cut(s)	43, 1250
AccI	GTMKAC	1 cut(s)	150
AccII	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
AciI	CCGC	5 cut(s)	27, 58, 168, 171, 1254
AclWI	GGATC	2 cut(s)	953, 966
AcoI	YGGCCR	2 cut(s)	55, 1063
AcsI	RAATTY	3 cut(s)	339, 918, 1352
AcuI	CTGAAG	1 cut(s)	569
AcyI	GRCGYC	1 cut(s)	44
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	1 cut(s)	804
AfiI	CCNNNNNNNGG	1 cut(s)	53
AjiI	CACGTC	1 cut(s)	1276
AjnI	CCWGG	2 cut(s)	313, 1402
AjuI	GAANNNNNNNTTGG	4 cut(s)	542, 574, 1227, 1259
Alw21I	GWGCWC	3 cut(s)	129, 377, 1171
Alw26I	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1279
AlwI	GGATC	2 cut(s)	953, 966
Ama87I	CYCGRG	1 cut(s)	648
AoxI	GGCC	5 cut(s)	55, 304, 924, 1063, 1423
ApeKI	GCWGC	5 cut(s)	262, 821, 1160, 1220, 1337
ApoI	RAATTY	3 cut(s)	339, 918, 1352
AspLEI	GCGC	3 cut(s)	32, 46, 365
AspS9I	GGNCC	7 cut(s)	82, 155, 398, 700, 925, 1406, 1424
AsuC2I	CCSGG	1 cut(s)	775
AsuHPI	GGTGA	3 cut(s)	596, 664, 692
AsuNHI	GCTAGC	1 cut(s)	161
AvaI	CYCGRG	1 cut(s)	648
AvaII	GGWCC	5 cut(s)	82, 155, 398, 700, 1406
BalI	TGGCCA	1 cut(s)	1065
BamHI	GGATCC	1 cut(s)	958
BanI	GGYRCC	2 cut(s)	43, 1250
BanII	GRGCYC	2 cut(s)	1171, 1473
BauI	CACGAG	1 cut(s)	104
Bbv12I	GWGCWC	3 cut(s)	129, 377, 1171
BbvI	GCAGC	5 cut(s)	249, 833, 1147, 1207, 1324
BccI	CCATC	3 cut(s)	557, 671, 1264
BceAI	ACGGC	5 cut(s)	40, 78, 121, 741, 821
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	2 cut(s)	315, 1404
BclI	TGATCA	2 cut(s)	937, 1308
BcnI	CCSGG	1 cut(s)	775
BcoDI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1279
BfaI	CTAG	1 cut(s)	162
BfoI	RGCGCY	2 cut(s)	33, 47
BfuAI	ACCTGC	2 cut(s)	166, 409
BisI	GCNGC	8 cut(s)	28, 58, 171, 263, 822, 1161, 1221, 1338
BlsI	GCNGC	8 cut(s)	29, 59, 172, 264, 823, 1162, 1222, 1339
Bme1390I	CCNGG	3 cut(s)	315, 775, 1404
Bme18I	GGWCC	5 cut(s)	82, 155, 398, 700, 1406
BmeT110I	CYCGRG	1 cut(s)	648
BmgBI	CACGTC	1 cut(s)	1276
BmgT120I	GGNCC	7 cut(s)	82, 155, 398, 700, 925, 1406, 1424
BmiI	GGNNCC	5 cut(s)	45, 702, 960, 1252, 1408
BmrFI	CCNGG	3 cut(s)	315, 775, 1404
BmsI	GCATC	4 cut(s)	760, 936, 993, 1367
BmtI	GCTAGC	1 cut(s)	165
BpmI	CTGGAG	4 cut(s)	321, 336, 498, 1185
BpuEI	CTTGAG	1 cut(s)	575
BpuMI	CCSGG	1 cut(s)	775
BsaBI	GATNNNNATC	2 cut(s)	936, 1198
BsaHI	GRCGYC	1 cut(s)	44
BsaI	GGTCTC	1 cut(s)	55
BsaJI	CCNNGG	3 cut(s)	120, 1060, 1072
BsaWI	WCCGGW	2 cut(s)	439, 782
BsaXI	ACNNNNNCTCC	4 cut(s)	873, 903, 1276, 1306
Bsc4I	CCNNNNNNNGG	1 cut(s)	53
Bse118I	RCCGGY	2 cut(s)	46, 173
Bse1I	ACTGG	3 cut(s)	85, 252, 1195
Bse3DI	GCAATG	2 cut(s)	763, 1326
Bse8I	GATNNNNATC	2 cut(s)	936, 1198
BseBI	CCWGG	2 cut(s)	315, 1404
BseDI	CCNNGG	3 cut(s)	120, 1060, 1072
BseGI	GGATG	2 cut(s)	568, 859
BseJI	GATNNNNATC	2 cut(s)	936, 1198
BseLI	CCNNNNNNNGG	1 cut(s)	53
BseMI	GCAATG	2 cut(s)	763, 1326
BseMII	CTCAG	1 cut(s)	1355
BseNI	ACTGG	3 cut(s)	85, 252, 1195
BseRI	GAGGAG	3 cut(s)	55, 200, 1297
BseX3I	CGGCCG	1 cut(s)	55
BseXI	GCAGC	5 cut(s)	249, 833, 1147, 1207, 1324
BseYI	CCCAGC	1 cut(s)	1426
BsgI	GTGCAG	4 cut(s)	276, 840, 911, 1323
Bsh1236I	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	5 cut(s)	57, 306, 926, 1065, 1425
BshNI	GGYRCC	2 cut(s)	43, 1250
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	3 cut(s)	129, 377, 1171
BsiHKCI	CYCGRG	1 cut(s)	648
BsiSI	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
BslFI	GGGAC	3 cut(s)	645, 686, 1392
BslI	CCNNNNNNNGG	1 cut(s)	53
BsmAI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1279
BsmBI	CGTCTC	2 cut(s)	42, 67
BsmFI	GGGAC	3 cut(s)	645, 686, 1392
BsnI	GGCC	5 cut(s)	57, 306, 926, 1065, 1425
Bso31I	GGTCTC	1 cut(s)	55
BsoBI	CYCGRG	1 cut(s)	648
Bsp1286I	GDGCHC	4 cut(s)	129, 377, 1171, 1473
Bsp143I	GATC	5 cut(s)	189, 358, 937, 958, 1308
Bsp19I	CCATGG	1 cut(s)	1060
Bsp68I	TCGCGA	1 cut(s)	194
BspACI	CCGC	5 cut(s)	27, 58, 168, 171, 1254
BspANI	GGCC	5 cut(s)	57, 306, 926, 1065, 1425
BspCNI	CTCAG	1 cut(s)	1356
BspFNI	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
BspHI	TCATGA	2 cut(s)	411, 762
BspLI	GGNNCC	5 cut(s)	45, 702, 960, 1252, 1408
BspMI	ACCTGC	2 cut(s)	166, 409
BspOI	GCTAGC	1 cut(s)	165
BspPI	GGATC	2 cut(s)	953, 966
BspT107I	GGYRCC	2 cut(s)	43, 1250
BspTNI	GGTCTC	1 cut(s)	55
BsrDI	GCAATG	2 cut(s)	763, 1326
BsrFI	RCCGGY	2 cut(s)	46, 173
BsrI	ACTGG	3 cut(s)	85, 252, 1195
BssAI	RCCGGY	2 cut(s)	46, 173
BssECI	CCNNGG	3 cut(s)	120, 1060, 1072
BssMI	GATC	5 cut(s)	189, 358, 937, 958, 1308
BssNI	GRCGYC	1 cut(s)	44
BssSI	CACGAG	1 cut(s)	104
BssT1I	CCWWGG	2 cut(s)	1060, 1072
Bst2BI	CACGAG	1 cut(s)	104
Bst2UI	CCWGG	2 cut(s)	315, 1404
Bst4CI	ACNGT	3 cut(s)	234, 1243, 1292
Bst6I	CTCTTC	2 cut(s)	490, 879
BstACI	GRCGYC	1 cut(s)	44
BstC8I	GCNNGC	6 cut(s)	163, 175, 531, 607, 730, 819
BstDEI	CTNAG	2 cut(s)	1364, 1442
BstDSI	CCRYGG	1 cut(s)	1060
BstF5I	GGATG	2 cut(s)	568, 859
BstFNI	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
BstH2I	RGCGCY	2 cut(s)	33, 47
BstHHI	GCGC	3 cut(s)	32, 46, 365
BstKTI	GATC	5 cut(s)	192, 361, 940, 961, 1311
BstMAI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1279
BstMBI	GATC	5 cut(s)	189, 358, 937, 958, 1308
BstMCI	CGRYCG	1 cut(s)	58
BstMWI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1031, 1166
BstNI	CCWGG	2 cut(s)	315, 1404
BstSCI	CCNGG	3 cut(s)	313, 773, 1402
BstUI	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
BstV1I	GCAGC	5 cut(s)	249, 833, 1147, 1207, 1324
BstX2I	RGATCY	1 cut(s)	958
BstXI	CCANNNNNNTGG	1 cut(s)	314
BstYI	RGATCY	1 cut(s)	958
BstZI	CGGCCG	1 cut(s)	55
BsuRI	GGCC	5 cut(s)	57, 306, 926, 1065, 1425
BtgI	CCRYGG	1 cut(s)	1060
BtrI	CACGTC	1 cut(s)	1276
BtsCI	GGATG	2 cut(s)	568, 859
BtsIMutI	CAGTG	1 cut(s)	259
BtuMI	TCGCGA	1 cut(s)	194
BveI	ACCTGC	2 cut(s)	166, 409
Cac8I	GCNNGC	6 cut(s)	163, 175, 531, 607, 730, 819
CciI	TCATGA	2 cut(s)	411, 762
CfoI	GCGC	3 cut(s)	32, 46, 365
Cfr10I	RCCGGY	2 cut(s)	46, 173
Cfr13I	GGNCC	7 cut(s)	82, 155, 398, 700, 925, 1406, 1424
CseI	GACGC	2 cut(s)	49, 1139
Csp6I	GTAC	1 cut(s)	803
CviAII	CATG	5 cut(s)	412, 763, 965, 1061, 1178
CviQI	GTAC	1 cut(s)	803
DdeI	CTNAG	2 cut(s)	1364, 1442
DinI	GGCGCC	1 cut(s)	45
DpnI	GATC	5 cut(s)	191, 360, 939, 960, 1310
DpnII	GATC	5 cut(s)	189, 358, 937, 958, 1308
DraIII	CACNNNGTG	1 cut(s)	328
EaeI	YGGCCR	2 cut(s)	55, 1063
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	2 cut(s)	490, 879
EarI	CTCTTC	2 cut(s)	490, 879
EciI	GGCGGA	1 cut(s)	157
Ecl136II	GAGCTC	1 cut(s)	1169
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	2 cut(s)	1060, 1072
Eco24I	GRGCYC	2 cut(s)	1171, 1473
Eco31I	GGTCTC	1 cut(s)	55
Eco32I	GATATC	1 cut(s)	1200
Eco47I	GGWCC	5 cut(s)	82, 155, 398, 700, 1406
Eco52I	CGGCCG	1 cut(s)	55
Eco53kI	GAGCTC	1 cut(s)	1169
Eco57I	CTGAAG	1 cut(s)	569
Eco88I	CYCGRG	1 cut(s)	648
EcoICRI	GAGCTC	1 cut(s)	1169
EcoO109I	RGGNCCY	1 cut(s)	700
EcoRII	CCWGG	2 cut(s)	313, 1402
EcoRV	GATATC	1 cut(s)	1200
EcoT14I	CCWWGG	2 cut(s)	1060, 1072
EcoT22I	ATGCAT	1 cut(s)	1150
EcoT38I	GRGCYC	2 cut(s)	1171, 1473
EgeI	GGCGCC	1 cut(s)	45
EheI	GGCGCC	1 cut(s)	45
ErhI	CCWWGG	2 cut(s)	1060, 1072
Esp3I	CGTCTC	2 cut(s)	42, 67
FaeI	CATG	5 cut(s)	415, 766, 968, 1064, 1181
FaqI	GGGAC	3 cut(s)	645, 686, 1392
FatI	CATG	5 cut(s)	411, 762, 964, 1060, 1177
FbaI	TGATCA	2 cut(s)	937, 1308
FblI	GTMKAC	1 cut(s)	150
Fnu4HI	GCNGC	8 cut(s)	28, 58, 171, 263, 822, 1161, 1221, 1338
FokI	GGATG	2 cut(s)	575, 846
FriOI	GRGCYC	2 cut(s)	1171, 1473
Fsp4HI	GCNGC	8 cut(s)	28, 58, 171, 263, 822, 1161, 1221, 1338
FspBI	CTAG	1 cut(s)	162
GlaI	GCGC	3 cut(s)	31, 45, 364
GluI	GCNGC	8 cut(s)	28, 58, 171, 263, 822, 1161, 1221, 1338
GsaI	CCCAGC	1 cut(s)	1430
GsuI	CTGGAG	4 cut(s)	321, 336, 498, 1185
HaeII	RGCGCY	2 cut(s)	33, 47
HaeIII	GGCC	5 cut(s)	57, 306, 926, 1065, 1425
HapII	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
HgaI	GACGC	2 cut(s)	49, 1139
HhaI	GCGC	3 cut(s)	32, 46, 365
Hin1I	GRCGYC	1 cut(s)	44
Hin1II	CATG	5 cut(s)	415, 766, 968, 1064, 1181
Hin6I	GCGC	3 cut(s)	30, 44, 363
HinP1I	GCGC	3 cut(s)	30, 44, 363
HincII	GTYRAC	4 cut(s)	151, 780, 1210, 1260
HindII	GTYRAC	4 cut(s)	151, 780, 1210, 1260
HindIII	AAGCTT	1 cut(s)	551
HinfI	GANTC	4 cut(s)	4, 248, 590, 1387
HpaI	GTTAAC	1 cut(s)	1210
HpaII	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
HphI	GGTGA	3 cut(s)	596, 664, 692
Hpy166II	GTNNAC	7 cut(s)	73, 151, 398, 780, 1115, 1210, 1260
Hpy188I	TCNGA	4 cut(s)	392, 549, 745, 1365
Hpy8I	GTNNAC	7 cut(s)	73, 151, 398, 780, 1115, 1210, 1260
Hpy99I	CGWCG	2 cut(s)	152, 155
HpyAV	CCTTC	5 cut(s)	234, 1043, 1094, 1184, 1309
HpyCH4III	ACNGT	3 cut(s)	234, 1243, 1292
HpyCH4IV	ACGT	2 cut(s)	426, 1275
HpyF10VI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1031, 1166
HpyF3I	CTNAG	2 cut(s)	1364, 1442
HpySE526I	ACGT	2 cut(s)	426, 1275
Hsp92I	GRCGYC	1 cut(s)	44
Hsp92II	CATG	5 cut(s)	415, 766, 968, 1064, 1181
HspAI	GCGC	3 cut(s)	30, 44, 363
KasI	GGCGCC	1 cut(s)	43
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Ksp22I	TGATCA	2 cut(s)	937, 1308
KspAI	GTTAAC	1 cut(s)	1210
Kzo9I	GATC	5 cut(s)	189, 358, 937, 958, 1308
LmnI	GCTCC	4 cut(s)	170, 372, 1166, 1228
Lsp1109I	GCAGC	5 cut(s)	249, 833, 1147, 1207, 1324
LweI	GCATC	4 cut(s)	760, 936, 993, 1367
MaeI	CTAG	1 cut(s)	162
MaeII	ACGT	2 cut(s)	426, 1275
MaeIII	GTNAC	3 cut(s)	320, 1391, 1445
MalI	GATC	5 cut(s)	191, 360, 939, 960, 1310
MboI	GATC	5 cut(s)	189, 358, 937, 958, 1308
MboII	GAAGA	7 cut(s)	219, 292, 507, 896, 1012, 1116, 1244
MflI	RGATCY	1 cut(s)	958
MhlI	GDGCHC	4 cut(s)	129, 377, 1171, 1473
MlsI	TGGCCA	1 cut(s)	1065
MluCI	AATT	9 cut(s)	339, 873, 908, 918, 1067, 1213, 1352, 1415, 1435
MluNI	TGGCCA	1 cut(s)	1065
Mly113I	GGCGCC	1 cut(s)	44
MlyI	GAGTC	2 cut(s)	13, 584
MmeI	TCCRAC	2 cut(s)	540, 1440
Mox20I	TGGCCA	1 cut(s)	1065
Mph1103I	ATGCAT	1 cut(s)	1150
MroNI	GCCGGC	1 cut(s)	173
MscI	TGGCCA	1 cut(s)	1065
MseI	TTAA	4 cut(s)	525, 627, 1209, 1480
MslI	CAYNNNNRTG	3 cut(s)	841, 969, 1454
Msp20I	TGGCCA	1 cut(s)	1065
MspI	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
MspR9I	CCNGG	3 cut(s)	315, 775, 1404
MvaI	CCWGG	2 cut(s)	315, 1404
MvnI	CGCG	5 cut(s)	60, 194, 363, 1133, 1256
MwoI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1031, 1166
NaeI	GCCGGC	1 cut(s)	175
NarI	GGCGCC	1 cut(s)	44
NciI	CCSGG	1 cut(s)	775
NcoI	CCATGG	1 cut(s)	1060
NdeII	GATC	5 cut(s)	189, 358, 937, 958, 1308
NgoMIV	GCCGGC	1 cut(s)	173
NheI	GCTAGC	1 cut(s)	161
NlaIII	CATG	5 cut(s)	415, 766, 968, 1064, 1181
NlaIV	GGNNCC	5 cut(s)	45, 702, 960, 1252, 1408
NmuCI	GTSAC	2 cut(s)	320, 1445
NruI	TCGCGA	1 cut(s)	194
NsiI	ATGCAT	1 cut(s)	1150
PagI	TCATGA	2 cut(s)	411, 762
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	2 cut(s)	248, 1387
PkrI	GCNGC	8 cut(s)	29, 59, 172, 264, 823, 1162, 1222, 1339
PleI	GAGTC	2 cut(s)	12, 584
PluTI	GGCGCC	1 cut(s)	47
PpsI	GAGTC	2 cut(s)	12, 584
PpuMI	RGGWCCY	1 cut(s)	700
Psp124BI	GAGCTC	1 cut(s)	1171
Psp5II	RGGWCCY	1 cut(s)	700
Psp6I	CCWGG	2 cut(s)	313, 1402
PspFI	CCCAGC	1 cut(s)	1426
PspGI	CCWGG	2 cut(s)	313, 1402
PspN4I	GGNNCC	5 cut(s)	45, 702, 960, 1252, 1408
PspPI	GGNCC	7 cut(s)	82, 155, 398, 700, 925, 1406, 1424
PspPPI	RGGWCCY	1 cut(s)	700
PsuI	RGATCY	1 cut(s)	958
RruI	TCGCGA	1 cut(s)	194
RsaI	GTAC	1 cut(s)	804
RsaNI	GTAC	1 cut(s)	803
RseI	CAYNNNNRTG	3 cut(s)	841, 969, 1454
SacI	GAGCTC	1 cut(s)	1171
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	4 cut(s)	525, 627, 1209, 1480
SatI	GCNGC	8 cut(s)	28, 58, 171, 263, 822, 1161, 1221, 1338
Sau3AI	GATC	5 cut(s)	189, 358, 937, 958, 1308
Sau96I	GGNCC	7 cut(s)	82, 155, 398, 700, 925, 1406, 1424
SchI	GAGTC	2 cut(s)	13, 584
ScrFI	CCNGG	3 cut(s)	315, 775, 1404
SduI	GDGCHC	4 cut(s)	129, 377, 1171, 1473
SfaNI	GCATC	4 cut(s)	760, 936, 993, 1367
SfoI	GGCGCC	1 cut(s)	45
SgrDI	CGTCGACG	1 cut(s)	149
SinI	GGWCC	5 cut(s)	82, 155, 398, 700, 1406
SmiMI	CAYNNNNRTG	3 cut(s)	841, 969, 1454
SmlI	CTYRAG	1 cut(s)	554
SmoI	CTYRAG	1 cut(s)	554
Sse9I	AATT	9 cut(s)	339, 873, 908, 918, 1067, 1213, 1352, 1415, 1435
SsiI	CCGC	5 cut(s)	27, 58, 168, 171, 1254
SspDI	GGCGCC	1 cut(s)	43
SspI	AATATT	1 cut(s)	791
SspMI	CTAG	1 cut(s)	162
SstI	GAGCTC	1 cut(s)	1171
StyD4I	CCNGG	3 cut(s)	313, 773, 1402
StyI	CCWWGG	2 cut(s)	1060, 1072
TaaI	ACNGT	3 cut(s)	234, 1243, 1292
TaiI	ACGT	2 cut(s)	429, 1278
TaqI	TCGA	7 cut(s)	89, 99, 150, 345, 720, 951, 1473
TaqII	GACCGA	1 cut(s)	206
TasI	AATT	9 cut(s)	339, 873, 908, 918, 1067, 1213, 1352, 1415, 1435
TauI	GCSGC	3 cut(s)	30, 60, 173
TfiI	GAWTC	2 cut(s)	248, 1387
Tru1I	TTAA	4 cut(s)	525, 627, 1209, 1480
Tru9I	TTAA	4 cut(s)	525, 627, 1209, 1480
TscAI	CASTG	1 cut(s)	259
TseFI	GTSAC	2 cut(s)	320, 1445
TseI	GCWGC	5 cut(s)	262, 821, 1160, 1220, 1337
Tsp45I	GTSAC	2 cut(s)	320, 1445
TspDTI	ATGAA	5 cut(s)	428, 930, 1113, 1166, 1254
TspGWI	ACGGA	2 cut(s)	58, 168
TspRI	CASTG	1 cut(s)	259
VpaK11BI	GGWCC	5 cut(s)	82, 155, 398, 700, 1406
XapI	RAATTY	3 cut(s)	339, 918, 1352
XmiI	GTMKAC	1 cut(s)	150
XspI	CTAG	1 cut(s)	162
Zsp2I	ATGCAT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.