Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001357

Physical Location & Seq

Genomic Coordinates Forward (+)

1319133 .. 1324554

Gene Structure 5422 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG017200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGAGTCCCTCATTGGTTGCAAACGGCGGCGCTTCGTCTCCGGCGCCGGTCTCCGGCCGCGTCTCCTCCGTTTACAGCGAGGTCCAGTCGAGCCGTATCGACCATGAGCTTCCTCTCCCCTCGGTGCTCAAAAAGCCGTTCAAGCTCGTCGACGGACCTGCTAGCTCCGCCGCCGGCAATCCAGAGGAGATCGCGAAGCTGTTTCCCAATGTTTTCGGTCAGCCTTCTTCACAGTTGGTGGAGTGTGATTCCAGTGCAGAGCTGCCGAACCAGAAGTTGAAGATTGGTGTGGTGTTGTCTGGAGGCCAAGCACCTGGAGGTCACAATGTGATTTCTGGAATTTTCGATTACTTGCAAGATCGCGCCAAAGGGAGCACGGTGTATGGTTTCAGAGGTGGACCTGCTGGTATCATGAAATGCAAATACGTTGAGCTTACACCGGAGTATGTTTATCCATACAGAAATCAGGGTGGTTTTGATATGATTTGTAGTGGAAGAGACAAGATTGAAACTCCAGAGCAGTTTAAGCAAGCACAAGAGACAGCTGTGAAGCTTGATTTGGATGGTCTTGTTGTTATTGGAGGAGATGACTCAAACACAAATGCGTGCCTCCTTGCTGAAAACTTTAAGGGACTGAACTTGAAAACTCGGGTGATAGGTTGCCCAAAAACTATTGATGGTGATTTGAAATGTAAAGAGGTCCCCACAAGTTTCGGGTTCGATACGGCTTGCAAGATATATTCAGAAATGATTGGCAATGTCATGATAGATGCCCGGTCAACCGGAAAATATTATCATTTTGTACGGCTTATGGGGCGTGCAGCTTCACACATTACATTAGAGTGTGCTTTGCAAACTCATCCAAATATCACAATTATTGGAGAAGAGGTTGCGGCAAAGAAGCAGACACTGAAAAATGTCACAGACTACATTGTAAACATAATCTTAAAGCGTGCGGATTTTGGTTATAACTACGGTGTTATACTTATTCCTGAAGGTCTTATTGACTTCATTCCTGAGGTGCAGGAGCTTATTGCTGAATTGAATGAAATTCTGGCCCGTGATGTTGTAGATGAAGATGGGTTGTGGAAAAAGAAACTCACAAGTCAGTCTCTACAGCTTTTTGACTTACTACCTGAAGCAATCCAGGAGCAGTTGATGCTCGAAAGAGATCCTCATGGAAATGTTCAGGTTGCCAAGATAGAAACAGAGAAGATGCTTTTCCAAATGGTTGAGGCTGACTTGGCAAAGAGGAAGCAGGAAGGCTCATACCATGGCCAATTCCAAGGAAAATCTCACTTTTTCGGGTATTTCTATTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008443 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0015979 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0042221 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0046835 GO:0047334 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00051 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00051 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PFK

Protein Analysis

440

Amino Acids

48.24

Weight (kDa)

5.53

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PFK	PF00365	94 - 346	9e-36	Phosphofructokinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12000
fragaria_vesca	FvH4_3g01360 FvH4_3g01360 FvH4_3g22340 FvH4_5g38692
malus_domestica	MD05G1352800.v1.1 MD05G1354700.v1.1 MD05G1354900.v1.1 MD08G1183700.v1.1 MD09G1228400.v1.1 MD10G1133500.v1.1 MD10G1327400.v1.1 MD12G1211800.v1.1 MD13G1182600.v1.1 MD17G1176400.v1.1 MD17G1211800.v1.1
prunus_persica	Prupe.4G014600_v2.0.a1 Prupe.4G014600_v2.0.a1 Prupe.4G014600_v2.0.a1
pyrus_communis	pycom01g09830 pycom05g15580 pycom05g32000 pycom10g04820 pycom10g27690 pycom111g03470 pycom12g06510 pycom14g19720 pycom15g20870 pycom15g34000 pycom17g07230 pycom17g26290
rosa_chinensis	RchiOBHm_Chr1g0337721 RchiOBHm_Chr2g0111881 RchiOBHm_Chr2g0137981 RchiOBHm_Chr4g0422781 RchiOBHm_Chr5g0001981 RchiOBHm_Chr6g0245811 RchiOBHm_Chr7g0178941
rosa_laevigata	RLG00000030986
rosa_multiflora	Rmu_co8429625.1_g000001 Rmu_sc0000378.1_g000018 Rmu_sc0006008.1_g000007
rosa_roxburghii	Rroxscaffold_1G00071370 Rroxscaffold_1G00074370 Rroxscaffold_4G00281720
rosa_rugosa	Rorug02G0348600 Rorug04G0394100 Rorug04G0394200
rosa_samantha	Rh1AG166900 Rh2BG004000 Rh5CG016600 Rh5DG017200
rosa_wichuraiana	Rw5G001500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	969
Acc36I	ACCTGC	2 cut(s)	166, 409
AccB1I	GGYRCC	1 cut(s)	43
AccI	GTMKAC	1 cut(s)	150
AccII	CGCG	3 cut(s)	60, 194, 363
AciI	CCGC	6 cut(s)	27, 58, 168, 171, 893, 956
AclWI	GGATC	1 cut(s)	1166
AcoI	YGGCCR	2 cut(s)	55, 1276
AcsI	RAATTY	2 cut(s)	339, 1050
AcuI	CTGAAG	2 cut(s)	1014, 1158
AcyI	GRCGYC	1 cut(s)	44
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	1 cut(s)	804
AfiI	CCNNNNNNNGG	1 cut(s)	53
AgsI	TTSAA	6 cut(s)	142, 280, 509, 643, 688, 1045
AjnI	CCWGG	2 cut(s)	313, 1146
AjuI	GAANNNNNNNTTGG	2 cut(s)	542, 574
Alw21I	GWGCWC	2 cut(s)	129, 377
Alw26I	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1116
AlwI	GGATC	1 cut(s)	1166
AlwNI	CAGNNNCTG	1 cut(s)	910
Ama87I	CYCGRG	1 cut(s)	648
AoxI	GGCC	4 cut(s)	55, 304, 1056, 1276
ApeKI	GCWGC	2 cut(s)	262, 821
ApoI	RAATTY	2 cut(s)	339, 1050
AspLEI	GCGC	3 cut(s)	32, 46, 365
AspS9I	GGNCC	5 cut(s)	82, 155, 398, 700, 1057
AsuC2I	CCSGG	1 cut(s)	775
AsuHPI	GGTGA	2 cut(s)	664, 692
AsuNHI	GCTAGC	1 cut(s)	161
AvaI	CYCGRG	1 cut(s)	648
AvaII	GGWCC	4 cut(s)	82, 155, 398, 700
AxyI	CCTNAGG	1 cut(s)	1017
BalI	TGGCCA	1 cut(s)	1278
BanI	GGYRCC	1 cut(s)	43
Bbv12I	GWGCWC	2 cut(s)	129, 377
BbvI	GCAGC	2 cut(s)	249, 833
BccI	CCATC	3 cut(s)	557, 671, 1073
BceAI	ACGGC	5 cut(s)	40, 78, 121, 741, 821
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	2 cut(s)	315, 1148
BcnI	CCSGG	1 cut(s)	775
BcoDI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1116
BfaI	CTAG	1 cut(s)	162
BfmI	CTRYAG	1 cut(s)	1115
BfoI	RGCGCY	2 cut(s)	33, 47
BfuAI	ACCTGC	2 cut(s)	166, 409
BisI	GCNGC	6 cut(s)	28, 58, 171, 263, 822, 894
BlsI	GCNGC	6 cut(s)	29, 59, 172, 264, 823, 895
Bme1390I	CCNGG	3 cut(s)	315, 775, 1148
Bme18I	GGWCC	4 cut(s)	82, 155, 398, 700
BmeT110I	CYCGRG	1 cut(s)	648
BmgT120I	GGNCC	5 cut(s)	82, 155, 398, 700, 1057
BmiI	GGNNCC	2 cut(s)	45, 702
BmrFI	CCNGG	3 cut(s)	315, 775, 1148
BmsI	GCATC	3 cut(s)	760, 1149, 1206
BmtI	GCTAGC	1 cut(s)	165
BpmI	CTGGAG	3 cut(s)	321, 336, 498
BpuMI	CCSGG	1 cut(s)	775
BsaHI	GRCGYC	1 cut(s)	44
BsaI	GGTCTC	1 cut(s)	55
BsaJI	CCNNGG	3 cut(s)	120, 1273, 1285
BsaWI	WCCGGW	2 cut(s)	439, 782
BsaXI	ACNNNNNCTCC	2 cut(s)	873, 903
Bsc4I	CCNNNNNNNGG	1 cut(s)	53
Bse118I	RCCGGY	2 cut(s)	46, 173
Bse1I	ACTGG	2 cut(s)	85, 252
Bse21I	CCTNAGG	1 cut(s)	1017
Bse3DI	GCAATG	1 cut(s)	763
BseBI	CCWGG	2 cut(s)	315, 1148
BseDI	CCNNGG	3 cut(s)	120, 1273, 1285
BseGI	GGATG	2 cut(s)	568, 859
BseLI	CCNNNNNNNGG	1 cut(s)	53
BseMI	GCAATG	1 cut(s)	763
BseMII	CTCAG	1 cut(s)	1008
BseNI	ACTGG	2 cut(s)	85, 252
BseRI	GAGGAG	3 cut(s)	55, 200, 597
BseX3I	CGGCCG	1 cut(s)	55
BseXI	GCAGC	2 cut(s)	249, 833
BsgI	GTGCAG	3 cut(s)	276, 840, 1043
Bsh1236I	CGCG	3 cut(s)	60, 194, 363
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	4 cut(s)	57, 306, 1058, 1278
BshNI	GGYRCC	1 cut(s)	43
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	2 cut(s)	129, 377
BsiHKCI	CYCGRG	1 cut(s)	648
BsiSI	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
BslFI	GGGAC	2 cut(s)	645, 686
BslI	CCNNNNNNNGG	1 cut(s)	53
BsmAI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1116
BsmBI	CGTCTC	2 cut(s)	42, 67
BsmFI	GGGAC	2 cut(s)	645, 686
BsnI	GGCC	4 cut(s)	57, 306, 1058, 1278
Bso31I	GGTCTC	1 cut(s)	55
BsoBI	CYCGRG	1 cut(s)	648
Bsp1286I	GDGCHC	2 cut(s)	129, 377
Bsp143I	GATC	3 cut(s)	189, 358, 1171
Bsp19I	CCATGG	1 cut(s)	1273
Bsp68I	TCGCGA	1 cut(s)	194
BspACI	CCGC	6 cut(s)	27, 58, 168, 171, 893, 956
BspANI	GGCC	4 cut(s)	57, 306, 1058, 1278
BspCNI	CTCAG	1 cut(s)	1009
BspFNI	CGCG	3 cut(s)	60, 194, 363
BspHI	TCATGA	2 cut(s)	411, 762
BspLI	GGNNCC	2 cut(s)	45, 702
BspMI	ACCTGC	2 cut(s)	166, 409
BspOI	GCTAGC	1 cut(s)	165
BspPI	GGATC	1 cut(s)	1166
BspT107I	GGYRCC	1 cut(s)	43
BspTNI	GGTCTC	1 cut(s)	55
BsrDI	GCAATG	1 cut(s)	763
BsrFI	RCCGGY	2 cut(s)	46, 173
BsrI	ACTGG	2 cut(s)	85, 252
BssAI	RCCGGY	2 cut(s)	46, 173
BssECI	CCNNGG	3 cut(s)	120, 1273, 1285
BssMI	GATC	3 cut(s)	189, 358, 1171
BssNI	GRCGYC	1 cut(s)	44
BssT1I	CCWWGG	2 cut(s)	1273, 1285
Bst2UI	CCWGG	2 cut(s)	315, 1148
Bst4CI	ACNGT	3 cut(s)	234, 379, 977
Bst6I	CTCTTC	2 cut(s)	490, 879
BstACI	GRCGYC	1 cut(s)	44
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstC8I	GCNNGC	7 cut(s)	163, 175, 531, 607, 730, 819, 954
BstDEI	CTNAG	1 cut(s)	1017
BstDSI	CCRYGG	1 cut(s)	1273
BstF5I	GGATG	2 cut(s)	568, 859
BstFNI	CGCG	3 cut(s)	60, 194, 363
BstH2I	RGCGCY	2 cut(s)	33, 47
BstHHI	GCGC	3 cut(s)	32, 46, 365
BstKTI	GATC	3 cut(s)	192, 361, 1174
BstMAI	GTCTC	6 cut(s)	42, 55, 67, 492, 533, 1116
BstMBI	GATC	3 cut(s)	189, 358, 1171
BstMCI	CGRYCG	1 cut(s)	58
BstMWI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1159, 1244
BstNI	CCWGG	2 cut(s)	315, 1148
BstSCI	CCNGG	3 cut(s)	313, 773, 1146
BstSFI	CTRYAG	1 cut(s)	1115
BstUI	CGCG	3 cut(s)	60, 194, 363
BstV1I	GCAGC	2 cut(s)	249, 833
BstX2I	RGATCY	1 cut(s)	1171
BstXI	CCANNNNNNTGG	1 cut(s)	314
BstYI	RGATCY	1 cut(s)	1171
BstZI	CGGCCG	1 cut(s)	55
Bsu36I	CCTNAGG	1 cut(s)	1017
BsuRI	GGCC	4 cut(s)	57, 306, 1058, 1278
BtgI	CCRYGG	1 cut(s)	1273
BtsCI	GGATG	2 cut(s)	568, 859
BtsIMutI	CAGTG	2 cut(s)	259, 908
BtuMI	TCGCGA	1 cut(s)	194
BveI	ACCTGC	2 cut(s)	166, 409
Cac8I	GCNNGC	7 cut(s)	163, 175, 531, 607, 730, 819, 954
CaiI	CAGNNNCTG	1 cut(s)	910
CciI	TCATGA	2 cut(s)	411, 762
CfoI	GCGC	3 cut(s)	32, 46, 365
Cfr10I	RCCGGY	2 cut(s)	46, 173
Cfr13I	GGNCC	5 cut(s)	82, 155, 398, 700, 1057
CseI	GACGC	1 cut(s)	49
Csp6I	GTAC	1 cut(s)	803
CviAII	CATG	5 cut(s)	104, 412, 763, 1178, 1274
CviQI	GTAC	1 cut(s)	803
DdeI	CTNAG	1 cut(s)	1017
DinI	GGCGCC	1 cut(s)	45
DpnI	GATC	3 cut(s)	191, 360, 1173
DpnII	GATC	3 cut(s)	189, 358, 1171
DraIII	CACNNNGTG	1 cut(s)	328
EaeI	YGGCCR	2 cut(s)	55, 1276
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	2 cut(s)	490, 879
EarI	CTCTTC	2 cut(s)	490, 879
EciI	GGCGGA	1 cut(s)	157
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	2 cut(s)	1273, 1285
Eco31I	GGTCTC	1 cut(s)	55
Eco47I	GGWCC	4 cut(s)	82, 155, 398, 700
Eco52I	CGGCCG	1 cut(s)	55
Eco57I	CTGAAG	2 cut(s)	1014, 1158
Eco81I	CCTNAGG	1 cut(s)	1017
Eco88I	CYCGRG	1 cut(s)	648
EcoO109I	RGGNCCY	1 cut(s)	700
EcoRII	CCWGG	2 cut(s)	313, 1146
EcoT14I	CCWWGG	2 cut(s)	1273, 1285
EgeI	GGCGCC	1 cut(s)	45
EheI	GGCGCC	1 cut(s)	45
ErhI	CCWWGG	2 cut(s)	1273, 1285
Esp3I	CGTCTC	2 cut(s)	42, 67
FaeI	CATG	5 cut(s)	107, 415, 766, 1181, 1277
FaqI	GGGAC	2 cut(s)	645, 686
FatI	CATG	5 cut(s)	103, 411, 762, 1177, 1273
FblI	GTMKAC	1 cut(s)	150
Fnu4HI	GCNGC	6 cut(s)	28, 58, 171, 263, 822, 894
FokI	GGATG	2 cut(s)	575, 846
Fsp4HI	GCNGC	6 cut(s)	28, 58, 171, 263, 822, 894
FspBI	CTAG	1 cut(s)	162
GlaI	GCGC	3 cut(s)	31, 45, 364
GluI	GCNGC	6 cut(s)	28, 58, 171, 263, 822, 894
GsuI	CTGGAG	3 cut(s)	321, 336, 498
HaeII	RGCGCY	2 cut(s)	33, 47
HaeIII	GGCC	4 cut(s)	57, 306, 1058, 1278
HapII	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
HgaI	GACGC	1 cut(s)	49
HhaI	GCGC	3 cut(s)	32, 46, 365
Hin1I	GRCGYC	1 cut(s)	44
Hin1II	CATG	5 cut(s)	107, 415, 766, 1181, 1277
Hin6I	GCGC	3 cut(s)	30, 44, 363
HinP1I	GCGC	3 cut(s)	30, 44, 363
HincII	GTYRAC	2 cut(s)	151, 780
HindII	GTYRAC	2 cut(s)	151, 780
HindIII	AAGCTT	1 cut(s)	551
HinfI	GANTC	3 cut(s)	4, 248, 590
HpaII	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
HphI	GGTGA	2 cut(s)	664, 692
Hpy166II	GTNNAC	5 cut(s)	73, 151, 398, 780, 937
Hpy188I	TCNGA	2 cut(s)	392, 745
Hpy188III	TCNNGA	9 cut(s)	182, 193, 300, 336, 412, 515, 763, 992, 1016
Hpy8I	GTNNAC	5 cut(s)	73, 151, 398, 780, 937
Hpy99I	CGWCG	2 cut(s)	152, 155
HpyAV	CCTTC	3 cut(s)	234, 989, 1256
HpyCH4III	ACNGT	3 cut(s)	234, 379, 977
HpyCH4IV	ACGT	1 cut(s)	426
HpyCH4V	TGCA	8 cut(s)	20, 257, 355, 420, 732, 821, 853, 1024
HpyF10VI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1159, 1244
HpyF3I	CTNAG	1 cut(s)	1017
HpySE526I	ACGT	1 cut(s)	426
Hsp92I	GRCGYC	1 cut(s)	44
Hsp92II	CATG	5 cut(s)	107, 415, 766, 1181, 1277
HspAI	GCGC	3 cut(s)	30, 44, 363
KasI	GGCGCC	1 cut(s)	43
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Kzo9I	GATC	3 cut(s)	189, 358, 1171
LmnI	GCTCC	4 cut(s)	170, 372, 1027, 1150
Lsp1109I	GCAGC	2 cut(s)	249, 833
LweI	GCATC	3 cut(s)	760, 1149, 1206
MaeI	CTAG	1 cut(s)	162
MaeII	ACGT	1 cut(s)	426
MaeIII	GTNAC	2 cut(s)	320, 919
MalI	GATC	3 cut(s)	191, 360, 1173
MboI	GATC	3 cut(s)	189, 358, 1171
MboII	GAAGA	6 cut(s)	219, 292, 507, 896, 1088, 1225
MflI	RGATCY	1 cut(s)	1171
MhlI	GDGCHC	2 cut(s)	129, 377
MlsI	TGGCCA	1 cut(s)	1278
MluCI	AATT	5 cut(s)	339, 873, 1040, 1050, 1280
MluNI	TGGCCA	1 cut(s)	1278
Mly113I	GGCGCC	1 cut(s)	44
MlyI	GAGTC	2 cut(s)	13, 584
Mox20I	TGGCCA	1 cut(s)	1278
MroNI	GCCGGC	1 cut(s)	173
MscI	TGGCCA	1 cut(s)	1278
MseI	TTAA	4 cut(s)	525, 627, 947, 1321
MslI	CAYNNNNRTG	2 cut(s)	841, 1182
Msp20I	TGGCCA	1 cut(s)	1278
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	7 cut(s)	41, 47, 54, 174, 440, 775, 783
MspR9I	CCNGG	3 cut(s)	315, 775, 1148
MvaI	CCWGG	2 cut(s)	315, 1148
MvnI	CGCG	3 cut(s)	60, 194, 363
MwoI	GCNNNNNNNGC	7 cut(s)	133, 142, 167, 526, 814, 1159, 1244
NaeI	GCCGGC	1 cut(s)	175
NarI	GGCGCC	1 cut(s)	44
NciI	CCSGG	1 cut(s)	775
NcoI	CCATGG	1 cut(s)	1273
NdeII	GATC	3 cut(s)	189, 358, 1171
NgoMIV	GCCGGC	1 cut(s)	173
NheI	GCTAGC	1 cut(s)	161
NlaIII	CATG	5 cut(s)	107, 415, 766, 1181, 1277
NlaIV	GGNNCC	2 cut(s)	45, 702
NmuCI	GTSAC	2 cut(s)	320, 919
NruI	TCGCGA	1 cut(s)	194
PagI	TCATGA	2 cut(s)	411, 762
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	1 cut(s)	248
PfoI	TCCNGGA	1 cut(s)	1146
PkrI	GCNGC	6 cut(s)	29, 59, 172, 264, 823, 895
PleI	GAGTC	2 cut(s)	12, 584
PluTI	GGCGCC	1 cut(s)	47
PpsI	GAGTC	2 cut(s)	12, 584
PpuMI	RGGWCCY	1 cut(s)	700
PsiI	TTATAA	1 cut(s)	969
Psp5II	RGGWCCY	1 cut(s)	700
Psp6I	CCWGG	2 cut(s)	313, 1146
PspGI	CCWGG	2 cut(s)	313, 1146
PspN4I	GGNNCC	2 cut(s)	45, 702
PspPI	GGNCC	5 cut(s)	82, 155, 398, 700, 1057
PspPPI	RGGWCCY	1 cut(s)	700
PstNI	CAGNNNCTG	1 cut(s)	910
PsuI	RGATCY	1 cut(s)	1171
PvuII	CAGCTG	1 cut(s)	545
RruI	TCGCGA	1 cut(s)	194
RsaI	GTAC	1 cut(s)	804
RsaNI	GTAC	1 cut(s)	803
RseI	CAYNNNNRTG	2 cut(s)	841, 1182
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	4 cut(s)	525, 627, 947, 1321
SatI	GCNGC	6 cut(s)	28, 58, 171, 263, 822, 894
Sau3AI	GATC	3 cut(s)	189, 358, 1171
Sau96I	GGNCC	5 cut(s)	82, 155, 398, 700, 1057
SchI	GAGTC	2 cut(s)	13, 584
ScrFI	CCNGG	3 cut(s)	315, 775, 1148
SduI	GDGCHC	2 cut(s)	129, 377
SfaNI	GCATC	3 cut(s)	760, 1149, 1206
SfcI	CTRYAG	1 cut(s)	1115
SfoI	GGCGCC	1 cut(s)	45
SgrDI	CGTCGACG	1 cut(s)	149
SinI	GGWCC	4 cut(s)	82, 155, 398, 700
SmiMI	CAYNNNNRTG	2 cut(s)	841, 1182
Sse9I	AATT	5 cut(s)	339, 873, 1040, 1050, 1280
SsiI	CCGC	6 cut(s)	27, 58, 168, 171, 893, 956
SspDI	GGCGCC	1 cut(s)	43
SspI	AATATT	1 cut(s)	791
SspMI	CTAG	1 cut(s)	162
StyD4I	CCNGG	3 cut(s)	313, 773, 1146
StyI	CCWWGG	2 cut(s)	1273, 1285
TaaI	ACNGT	3 cut(s)	234, 379, 977
TaiI	ACGT	1 cut(s)	429
TaqI	TCGA	6 cut(s)	89, 99, 150, 345, 720, 1164
TaqII	GACCGA	1 cut(s)	206
TasI	AATT	5 cut(s)	339, 873, 1040, 1050, 1280
TauI	GCSGC	4 cut(s)	30, 60, 173, 896
TfiI	GAWTC	1 cut(s)	248
Tru1I	TTAA	4 cut(s)	525, 627, 947, 1321
Tru9I	TTAA	4 cut(s)	525, 627, 947, 1321
TscAI	CASTG	2 cut(s)	259, 915
TseFI	GTSAC	2 cut(s)	320, 919
TseI	GCWGC	2 cut(s)	262, 821
Tsp45I	GTSAC	2 cut(s)	320, 919
TspDTI	ATGAA	4 cut(s)	428, 1000, 1062, 1089
TspGWI	ACGGA	2 cut(s)	58, 168
TspRI	CASTG	2 cut(s)	259, 915
VpaK11BI	GGWCC	4 cut(s)	82, 155, 398, 700
XapI	RAATTY	2 cut(s)	339, 1050
XmiI	GTMKAC	1 cut(s)	150
XspI	CTAG	1 cut(s)	162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.