Belongs to the thiolase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04710 AT2G33150 |
| fragaria_vesca | FvH4_4g00310 |
| malus_domestica | MD04G1003800.v1.1 |
| prunus_persica | Prupe.1G003300_v2.0.a1 Prupe.1G003300_v2.0.a1 |
| pyrus_communis | pycom04g00390 |
| rosa_chinensis | RchiOBHm_Chr4g0385141 RchiOBHm_Chr4g0415491 RchiOBHm_Chr6g0275511 |
| rosa_laevigata | RLG00000005750 RLG00000010254 |
| rosa_multiflora | Rmu_sc0003086.1_g000005 Rmu_sc0008734.1_g000018 Rmu_sc0010556.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00010730 Rroxscaffold_1G00018720 Rroxscaffold_1G00054220 Rroxscaffold_3G00240070 Rroxscaffold_5G00333060 Rroxscaffold_5G00355890 Rroxscaffold_6G00390920 |
| rosa_rugosa | Rorug03G0299900 |
| rosa_samantha | Rh1BG085600 Rh2BG386800 Rh2BG500100 Rh2DG511300 Rh4AG003100 Rh4BG002500 Rh4BG187100 Rh4CG003300 Rh4DG002800 Rh5AG250800 Rh5AG295600 Rh5AG385400 Rh5AG466200 Rh5BG246000 Rh5DG254500 Rh6DG201600 Rh7CG178800 Rh7CG381300 Rh7DG359400 |
| rosa_wichuraiana | Rw3G018530 Rw4G000620 Rw7G039000 Rw7G041060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 191, 502 |
| Acc65I | GGTACC | 1 cut(s) | 899 |
| AccB1I | GGYRCC | 2 cut(s) | 899, 1784 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1340, 1538 |
| AccBSI | CCGCTC | 1 cut(s) | 570 |
| AccII | CGCG | 2 cut(s) | 683, 792 |
| AciI | CCGC | 7 cut(s) | 568, 696, 792, 795, 1840, 1887, 1909 |
| AclWI | GGATC | 5 cut(s) | 357, 1325, 1568, 1581, 1715 |
| AcoI | YGGCCR | 3 cut(s) | 154, 1755, 1762 |
| AcsI | RAATTY | 5 cut(s) | 79, 210, 308, 469, 1527 |
| AcuI | CTGAAG | 3 cut(s) | 344, 378, 1436 |
| AdeI | CACNNNGTG | 1 cut(s) | 1775 |
| AfaI | GTAC | 3 cut(s) | 62, 341, 901 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 574, 685, 720, 1340, 1538 |
| AflIII | ACRYGT | 1 cut(s) | 729 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 119, 151, 1512, 1544 |
| Alw21I | GWGCWC | 1 cut(s) | 333 |
| Alw26I | GTCTC | 1 cut(s) | 924 |
| AlwI | GGATC | 5 cut(s) | 357, 1325, 1568, 1581, 1715 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1028, 1271, 1604 |
| Ama87I | CYCGRG | 1 cut(s) | 914 |
| AoxI | GGCC | 7 cut(s) | 154, 576, 676, 783, 1594, 1755, 1762 |
| ApoI | RAATTY | 5 cut(s) | 79, 210, 308, 469, 1527 |
| Asp718I | GGTACC | 1 cut(s) | 899 |
| AspLEI | GCGC | 1 cut(s) | 832 |
| AspS9I | GGNCC | 6 cut(s) | 314, 577, 1402, 1440, 1595, 1906 |
| AsuC2I | CCSGG | 3 cut(s) | 915, 916, 1081 |
| AsuHPI | GGTGA | 6 cut(s) | 64, 76, 130, 539, 1177, 1355 |
| AsuII | TTCGAA | 1 cut(s) | 1384 |
| AsuNHI | GCTAGC | 1 cut(s) | 929 |
| AvaI | CYCGRG | 1 cut(s) | 914 |
| AvaII | GGWCC | 4 cut(s) | 314, 1402, 1440, 1906 |
| AxyI | CCTNAGG | 1 cut(s) | 673 |
| BaeGI | GKGCMC | 1 cut(s) | 1789 |
| BalI | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| BamHI | GGATCC | 1 cut(s) | 1573 |
| BanI | GGYRCC | 2 cut(s) | 899, 1784 |
| BauI | CACGAG | 2 cut(s) | 36, 1811 |
| Bbv12I | GWGCWC | 1 cut(s) | 333 |
| BccI | CCATC | 9 cut(s) | 146, 412, 937, 1370, 1430, 1469, 1589, 1773, 1870 |
| BceAI | ACGGC | 2 cut(s) | 199, 1686 |
| BcnI | CCSGG | 3 cut(s) | 915, 916, 1081 |
| BcoDI | GTCTC | 1 cut(s) | 924 |
| BfaI | CTAG | 5 cut(s) | 227, 930, 1406, 1461, 1712 |
| BfmI | CTRYAG | 3 cut(s) | 22, 198, 1242 |
| BfuAI | ACCTGC | 2 cut(s) | 191, 502 |
| BglII | AGATCT | 1 cut(s) | 1143 |
| BmcAI | AGTACT | 1 cut(s) | 341 |
| Bme1390I | CCNGG | 3 cut(s) | 915, 916, 1081 |
| Bme18I | GGWCC | 4 cut(s) | 314, 1402, 1440, 1906 |
| BmeT110I | CYCGRG | 1 cut(s) | 914 |
| BmgT120I | GGNCC | 6 cut(s) | 314, 577, 1402, 1440, 1595, 1906 |
| BmiI | GGNNCC | 7 cut(s) | 901, 912, 1078, 1441, 1575, 1786, 1907 |
| BmrFI | CCNGG | 3 cut(s) | 915, 916, 1081 |
| BmsI | GCATC | 2 cut(s) | 99, 1957 |
| BmtI | GCTAGC | 1 cut(s) | 933 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1476, 1508 |
| BpmI | CTGGAG | 2 cut(s) | 92, 1503 |
| Bpu10I | CCTNAGC | 1 cut(s) | 390 |
| Bpu14I | TTCGAA | 1 cut(s) | 1384 |
| BpuEI | CTTGAG | 1 cut(s) | 824 |
| BpuMI | CCSGG | 3 cut(s) | 915, 916, 1081 |
| Bsa29I | ATCGAT | 1 cut(s) | 503 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1128 |
| BsaI | GGTCTC | 1 cut(s) | 924 |
| BsaJI | CCNNGG | 4 cut(s) | 523, 914, 1188, 1962 |
| BsaWI | WCCGGW | 1 cut(s) | 74 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 574, 685, 720, 1340, 1538 |
| Bse118I | RCCGGY | 1 cut(s) | 979 |
| Bse1I | ACTGG | 1 cut(s) | 1613 |
| Bse21I | CCTNAGG | 1 cut(s) | 673 |
| Bse3DI | GCAATG | 1 cut(s) | 216 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1128 |
| BseCI | ATCGAT | 1 cut(s) | 503 |
| BseDI | CCNNGG | 4 cut(s) | 523, 914, 1188, 1962 |
| BseGI | GGATG | 8 cut(s) | 247, 352, 745, 948, 1129, 1765, 1881, 1972 |
| BseJI | GATNNNNATC | 1 cut(s) | 1128 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 574, 685, 720, 1340, 1538 |
| BseMI | GCAATG | 1 cut(s) | 216 |
| BseMII | CTCAG | 3 cut(s) | 390, 404, 587 |
| BseNI | ACTGG | 1 cut(s) | 1613 |
| BseSI | GKGCMC | 1 cut(s) | 1789 |
| BseYI | CCCAGC | 3 cut(s) | 275, 698, 1597 |
| BsgI | GTGCAG | 1 cut(s) | 1902 |
| Bsh1236I | CGCG | 2 cut(s) | 683, 792 |
| BshFI | GGCC | 7 cut(s) | 156, 578, 678, 785, 1596, 1757, 1764 |
| BshNI | GGYRCC | 2 cut(s) | 899, 1784 |
| BshVI | ATCGAT | 1 cut(s) | 503 |
| BsiHKAI | GWGCWC | 1 cut(s) | 333 |
| BsiHKCI | CYCGRG | 1 cut(s) | 914 |
| BsiSI | CCGG | 4 cut(s) | 75, 915, 980, 1080 |
| BslFI | GGGAC | 3 cut(s) | 292, 1453, 1919 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 574, 685, 720, 1340, 1538 |
| BsmAI | GTCTC | 1 cut(s) | 924 |
| BsmFI | GGGAC | 3 cut(s) | 292, 1453, 1919 |
| BsmI | GAATGC | 1 cut(s) | 941 |
| BsnI | GGCC | 7 cut(s) | 156, 578, 678, 785, 1596, 1757, 1764 |
| Bso31I | GGTCTC | 1 cut(s) | 924 |
| BsoBI | CYCGRG | 1 cut(s) | 914 |
| Bsp119I | TTCGAA | 1 cut(s) | 1384 |
| Bsp1286I | GDGCHC | 2 cut(s) | 333, 1789 |
| BspACI | CCGC | 7 cut(s) | 568, 696, 792, 795, 1840, 1887, 1909 |
| BspANI | GGCC | 7 cut(s) | 156, 578, 678, 785, 1596, 1757, 1764 |
| BspCNI | CTCAG | 3 cut(s) | 391, 403, 586 |
| BspDI | ATCGAT | 1 cut(s) | 503 |
| BspFNI | CGCG | 2 cut(s) | 683, 792 |
| BspLI | GGNNCC | 7 cut(s) | 901, 912, 1078, 1441, 1575, 1786, 1907 |
| BspMAI | CTGCAG | 2 cut(s) | 202, 1246 |
| BspMI | ACCTGC | 2 cut(s) | 191, 502 |
| BspOI | GCTAGC | 1 cut(s) | 933 |
| BspPI | GGATC | 5 cut(s) | 357, 1325, 1568, 1581, 1715 |
| BspT104I | TTCGAA | 1 cut(s) | 1384 |
| BspT107I | GGYRCC | 2 cut(s) | 899, 1784 |
| BspTNI | GGTCTC | 1 cut(s) | 924 |
| BsrBI | CCGCTC | 1 cut(s) | 570 |
| BsrDI | GCAATG | 1 cut(s) | 216 |
| BsrFI | RCCGGY | 1 cut(s) | 979 |
| BsrI | ACTGG | 1 cut(s) | 1613 |
| BssAI | RCCGGY | 1 cut(s) | 979 |
| BssECI | CCNNGG | 4 cut(s) | 523, 914, 1188, 1962 |
| BssSI | CACGAG | 2 cut(s) | 36, 1811 |
| BssT1I | CCWWGG | 1 cut(s) | 1962 |
| Bst2BI | CACGAG | 2 cut(s) | 36, 1811 |
| Bst4CI | ACNGT | 7 cut(s) | 46, 344, 524, 904, 976, 991, 1099 |
| Bst6I | CTCTTC | 2 cut(s) | 354, 1496 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1271, 1784 |
| BstBI | TTCGAA | 1 cut(s) | 1384 |
| BstC8I | GCNNGC | 4 cut(s) | 375, 931, 961, 1933 |
| BstDEI | CTNAG | 4 cut(s) | 390, 399, 573, 673 |
| BstDSI | CCRYGG | 1 cut(s) | 523 |
| BstEII | GGTNACC | 1 cut(s) | 1183 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 718 |
| BstF5I | GGATG | 8 cut(s) | 247, 352, 745, 948, 1129, 1765, 1881, 1972 |
| BstFNI | CGCG | 2 cut(s) | 683, 792 |
| BstHHI | GCGC | 1 cut(s) | 832 |
| BstMAI | GTCTC | 1 cut(s) | 924 |
| BstNSI | RCATGY | 1 cut(s) | 693 |
| BstPI | GGTNACC | 1 cut(s) | 1183 |
| BstSCI | CCNGG | 3 cut(s) | 913, 914, 1079 |
| BstSFI | CTRYAG | 3 cut(s) | 22, 198, 1242 |
| BstSLI | GKGCMC | 1 cut(s) | 1789 |
| BstUI | CGCG | 2 cut(s) | 683, 792 |
| BstX2I | RGATCY | 2 cut(s) | 1143, 1573 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1113, 1772 |
| BstYI | RGATCY | 2 cut(s) | 1143, 1573 |
| Bsu15I | ATCGAT | 1 cut(s) | 503 |
| Bsu36I | CCTNAGG | 1 cut(s) | 673 |
| BsuRI | GGCC | 7 cut(s) | 156, 578, 678, 785, 1596, 1757, 1764 |
| BsuTUI | ATCGAT | 1 cut(s) | 503 |
| BtgI | CCRYGG | 1 cut(s) | 523 |
| BtgZI | GCGATG | 2 cut(s) | 76, 165 |
| BtsCI | GGATG | 8 cut(s) | 247, 352, 745, 948, 1129, 1765, 1881, 1972 |
| BtsI | GCAGTG | 2 cut(s) | 852, 1446 |
| BtsIMutI | CAGTG | 5 cut(s) | 42, 189, 852, 1446, 1911 |
| BveI | ACCTGC | 2 cut(s) | 191, 502 |
| Cac8I | GCNNGC | 4 cut(s) | 375, 931, 961, 1933 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1028, 1271, 1604 |
| CfoI | GCGC | 1 cut(s) | 832 |
| Cfr10I | RCCGGY | 1 cut(s) | 979 |
| Cfr13I | GGNCC | 6 cut(s) | 314, 577, 1402, 1440, 1595, 1906 |
| Cfr9I | CCCGGG | 1 cut(s) | 914 |
| ClaI | ATCGAT | 1 cut(s) | 503 |
| CseI | GACGC | 2 cut(s) | 672, 1811 |
| Csp6I | GTAC | 3 cut(s) | 61, 340, 900 |
| CviAII | CATG | 6 cut(s) | 334, 690, 812, 1093, 1113, 1585 |
| CviQI | GTAC | 3 cut(s) | 61, 340, 900 |
| DdeI | CTNAG | 4 cut(s) | 390, 399, 573, 673 |
| DraI | TTTAAA | 1 cut(s) | 1294 |
| DraIII | CACNNNGTG | 1 cut(s) | 1775 |
| EaeI | YGGCCR | 3 cut(s) | 154, 1755, 1762 |
| Eam1104I | CTCTTC | 2 cut(s) | 354, 1496 |
| EarI | CTCTTC | 2 cut(s) | 354, 1496 |
| Eco130I | CCWWGG | 1 cut(s) | 1962 |
| Eco147I | AGGCCT | 1 cut(s) | 678 |
| Eco31I | GGTCTC | 1 cut(s) | 924 |
| Eco47I | GGWCC | 4 cut(s) | 314, 1402, 1440, 1906 |
| Eco57I | CTGAAG | 3 cut(s) | 344, 378, 1436 |
| Eco81I | CCTNAGG | 1 cut(s) | 673 |
| Eco88I | CYCGRG | 1 cut(s) | 914 |
| Eco91I | GGTNACC | 1 cut(s) | 1183 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 718 |
| EcoO65I | GGTNACC | 1 cut(s) | 1183 |
| EcoRI | GAATTC | 1 cut(s) | 1527 |
| EcoT14I | CCWWGG | 1 cut(s) | 1962 |
| ErhI | CCWWGG | 1 cut(s) | 1962 |
| FaeI | CATG | 6 cut(s) | 337, 693, 815, 1096, 1116, 1588 |
| FaqI | GGGAC | 3 cut(s) | 292, 1453, 1919 |
| FatI | CATG | 6 cut(s) | 333, 689, 811, 1092, 1112, 1584 |
| FokI | GGATG | 7 cut(s) | 254, 339, 752, 955, 1136, 1752, 1888 |
| FspBI | CTAG | 5 cut(s) | 227, 930, 1406, 1461, 1712 |
| GlaI | GCGC | 1 cut(s) | 831 |
| GsaI | CCCAGC | 3 cut(s) | 279, 702, 1601 |
| GsuI | CTGGAG | 2 cut(s) | 92, 1503 |
| HaeIII | GGCC | 7 cut(s) | 156, 578, 678, 785, 1596, 1757, 1764 |
| HapII | CCGG | 4 cut(s) | 75, 915, 980, 1080 |
| HgaI | GACGC | 2 cut(s) | 672, 1811 |
| HhaI | GCGC | 1 cut(s) | 832 |
| Hin1II | CATG | 6 cut(s) | 337, 693, 815, 1096, 1116, 1588 |
| Hin6I | GCGC | 1 cut(s) | 830 |
| HinP1I | GCGC | 1 cut(s) | 830 |
| HincII | GTYRAC | 1 cut(s) | 1249 |
| HindII | GTYRAC | 1 cut(s) | 1249 |
| HindIII | AAGCTT | 2 cut(s) | 113, 371 |
| HinfI | GANTC | 9 cut(s) | 49, 194, 234, 497, 868, 1088, 1250, 1381, 1943 |
| HpaII | CCGG | 4 cut(s) | 75, 915, 980, 1080 |
| HphI | GGTGA | 6 cut(s) | 64, 76, 130, 539, 1177, 1355 |
| Hpy166II | GTNNAC | 6 cut(s) | 63, 72, 138, 994, 1102, 1249 |
| Hpy188I | TCNGA | 6 cut(s) | 18, 630, 867, 873, 1192, 1402 |
| Hpy188III | TCNNGA | 7 cut(s) | 109, 227, 356, 518, 1495, 1549, 1724 |
| Hpy8I | GTNNAC | 6 cut(s) | 63, 72, 138, 994, 1102, 1249 |
| Hpy99I | CGWCG | 3 cut(s) | 179, 688, 1827 |
| HpyAV | CCTTC | 8 cut(s) | 172, 319, 379, 427, 606, 868, 1112, 1178 |
| HpyCH4III | ACNGT | 7 cut(s) | 46, 344, 524, 904, 976, 991, 1099 |
| HpyCH4IV | ACGT | 1 cut(s) | 729 |
| HpyF3I | CTNAG | 4 cut(s) | 390, 399, 573, 673 |
| HpySE526I | ACGT | 1 cut(s) | 729 |
| Hsp92II | CATG | 6 cut(s) | 337, 693, 815, 1096, 1116, 1588 |
| HspAI | GCGC | 1 cut(s) | 830 |
| KpnI | GGTACC | 1 cut(s) | 903 |
| LmnI | GCTCC | 5 cut(s) | 328, 916, 1076, 1228, 1484 |
| LweI | GCATC | 2 cut(s) | 99, 1957 |
| MaeI | CTAG | 5 cut(s) | 227, 930, 1406, 1461, 1712 |
| MaeII | ACGT | 1 cut(s) | 729 |
| MaeIII | GTNAC | 4 cut(s) | 394, 1183, 1357, 1703 |
| MbiI | CCGCTC | 1 cut(s) | 570 |
| MboII | GAAGA | 7 cut(s) | 371, 544, 628, 649, 815, 1163, 1513 |
| MfeI | CAATTG | 1 cut(s) | 145 |
| MflI | RGATCY | 2 cut(s) | 1143, 1573 |
| MhlI | GDGCHC | 2 cut(s) | 333, 1789 |
| MlsI | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| MluNI | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| MlyI | GAGTC | 1 cut(s) | 1244 |
| MmeI | TCCRAC | 3 cut(s) | 150, 1065, 1380 |
| Mox20I | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| MscI | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| MseI | TTAA | 4 cut(s) | 1128, 1293, 1428, 1740 |
| MslI | CAYNNNNRTG | 2 cut(s) | 816, 1874 |
| Msp20I | TGGCCA | 3 cut(s) | 156, 1757, 1764 |
| MspA1I | CMGCKG | 4 cut(s) | 698, 1268, 1601, 1631 |
| MspI | CCGG | 4 cut(s) | 75, 915, 980, 1080 |
| MspR9I | CCNGG | 3 cut(s) | 915, 916, 1081 |
| MunI | CAATTG | 1 cut(s) | 145 |
| Mva1269I | GAATGC | 1 cut(s) | 941 |
| MvnI | CGCG | 2 cut(s) | 683, 792 |
| NciI | CCSGG | 3 cut(s) | 915, 916, 1081 |
| NheI | GCTAGC | 1 cut(s) | 929 |
| NlaIII | CATG | 6 cut(s) | 337, 693, 815, 1096, 1116, 1588 |
| NlaIV | GGNNCC | 7 cut(s) | 901, 912, 1078, 1441, 1575, 1786, 1907 |
| NmeAIII | GCCGAG | 1 cut(s) | 82 |
| NmuCI | GTSAC | 1 cut(s) | 1183 |
| NspI | RCATGY | 1 cut(s) | 693 |
| NspV | TTCGAA | 1 cut(s) | 1384 |
| PceI | AGGCCT | 1 cut(s) | 678 |
| PctI | GAATGC | 1 cut(s) | 941 |
| PfeI | GAWTC | 8 cut(s) | 49, 194, 234, 497, 868, 1088, 1381, 1943 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1340, 1538 |
| PleI | GAGTC | 1 cut(s) | 1244 |
| PpsI | GAGTC | 1 cut(s) | 1244 |
| PspEI | GGTNACC | 1 cut(s) | 1183 |
| PspFI | CCCAGC | 3 cut(s) | 275, 698, 1597 |
| PspN4I | GGNNCC | 7 cut(s) | 901, 912, 1078, 1441, 1575, 1786, 1907 |
| PspPI | GGNCC | 6 cut(s) | 314, 577, 1402, 1440, 1595, 1906 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 53, 85 |
| PstI | CTGCAG | 2 cut(s) | 202, 1246 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1028, 1271, 1604 |
| PsuI | RGATCY | 2 cut(s) | 1143, 1573 |
| PvuII | CAGCTG | 3 cut(s) | 1268, 1601, 1631 |
| RsaI | GTAC | 3 cut(s) | 62, 341, 901 |
| RsaNI | GTAC | 3 cut(s) | 61, 340, 900 |
| RseI | CAYNNNNRTG | 2 cut(s) | 816, 1874 |
| SaqAI | TTAA | 4 cut(s) | 1128, 1293, 1428, 1740 |
| Sau96I | GGNCC | 6 cut(s) | 314, 577, 1402, 1440, 1595, 1906 |
| ScaI | AGTACT | 1 cut(s) | 341 |
| SchI | GAGTC | 1 cut(s) | 1244 |
| ScrFI | CCNGG | 3 cut(s) | 915, 916, 1081 |
| SduI | GDGCHC | 2 cut(s) | 333, 1789 |
| SfaNI | GCATC | 2 cut(s) | 99, 1957 |
| SfcI | CTRYAG | 3 cut(s) | 22, 198, 1242 |
| SfuI | TTCGAA | 1 cut(s) | 1384 |
| SinI | GGWCC | 4 cut(s) | 314, 1402, 1440, 1906 |
| SmaI | CCCGGG | 1 cut(s) | 916 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 816, 1874 |
| SmlI | CTYRAG | 1 cut(s) | 839 |
| SmoI | CTYRAG | 1 cut(s) | 839 |
| SseBI | AGGCCT | 1 cut(s) | 678 |
| SsiI | CCGC | 7 cut(s) | 568, 696, 792, 795, 1840, 1887, 1909 |
| SspI | AATATT | 1 cut(s) | 427 |
| SspMI | CTAG | 5 cut(s) | 227, 930, 1406, 1461, 1712 |
| StuI | AGGCCT | 1 cut(s) | 678 |
| StyD4I | CCNGG | 3 cut(s) | 913, 914, 1079 |
| StyI | CCWWGG | 1 cut(s) | 1962 |
| TaaI | ACNGT | 7 cut(s) | 46, 344, 524, 904, 976, 991, 1099 |
| TaiI | ACGT | 1 cut(s) | 732 |
| TaqI | TCGA | 3 cut(s) | 177, 503, 1384 |
| TaqII | GACCGA | 1 cut(s) | 331 |
| TatI | WGTACW | 2 cut(s) | 60, 339 |
| TauI | GCSGC | 5 cut(s) | 698, 795, 798, 1842, 1889 |
| TfiI | GAWTC | 8 cut(s) | 49, 194, 234, 497, 868, 1088, 1381, 1943 |
| Tru1I | TTAA | 4 cut(s) | 1128, 1293, 1428, 1740 |
| Tru9I | TTAA | 4 cut(s) | 1128, 1293, 1428, 1740 |
| TscAI | CASTG | 5 cut(s) | 49, 196, 852, 1453, 1918 |
| TseFI | GTSAC | 1 cut(s) | 1183 |
| Tsp45I | GTSAC | 1 cut(s) | 1183 |
| TspDTI | ATGAA | 8 cut(s) | 350, 489, 650, 656, 1314, 1514, 1832, 1932 |
| TspMI | CCCGGG | 1 cut(s) | 914 |
| TspRI | CASTG | 5 cut(s) | 49, 196, 852, 1453, 1918 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1340, 1538 |
| VpaK11BI | GGWCC | 4 cut(s) | 314, 1402, 1440, 1906 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 718 |
| XapI | RAATTY | 5 cut(s) | 79, 210, 308, 469, 1527 |
| XbaI | TCTAGA | 1 cut(s) | 226 |
| XceI | RCATGY | 1 cut(s) | 693 |
| XmaI | CCCGGG | 1 cut(s) | 914 |
| XspI | CTAG | 5 cut(s) | 227, 930, 1406, 1461, 1712 |
| ZrmI | AGTACT | 1 cut(s) | 341 |