Rh7CG381300

Belongs to the thiolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001874
Physical Location & Seq
Forward (+)
48042343 .. 48044207
1865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG381300.1

Sequence Viewer

Length: 870 bp
ATGGCTGCTTTCTATGCTGGCTTCCCTGAAACTGTGCCGGTTAGAACTGTGAACAGACAATGTTCGTCTGGGCTTCAAGCAGTTGCTGATGTAGCTGCTTCTATAAGAGCAGGGTTTTATGACATTGGTATTGGAGCTAGGTTGGAATCCATGACTGTAAACCCAATGGCATGGGAAGGGGATGTTAATTCTAAAGTAAAGATCTTTGAACAAGCCCAGAATTGCCTTCTTCCTATGGAGGTCACCTCGGAAAATGTTGCTCATCGTTTTGGTGTTTCAAGGCAGGAGCAAGATCAGGCTTCAGCAGCTGCTACTACTACTGCTGGTAGATTTAAAGATGAAATTATCCCTGTGGCAACCAAGATTGTTGATCCAAAATCTGGTGGTGAGAAACCTGTTACAATCTCCGTTGATGATGGGATTCGAAACACAACATTGTCGGACCTAGCAAAGCTGAAGCCTGTGTTTAAGAAAGATGGGACCACCACTACTGGTAATTCTAGTCAAGTTAGTGATGGTGCTGGAGCTGTTCTCTTGATGAAGAGAAGTGTTGCCGACCAAAAAGGAATTCCAATTCTTGGTGTGTCAAAGAGCTTGCTGAGTTTGTCTGAGATTCTGATCAAGTACATAGCATTGAAGGAGCAGAAAGTGTTGGACCATGAGAAGGTTCAAGTAGAGCAAGAGAAGATCAGGGTTCAGAAGTTGTTGAATGGGTTGCAGAACTCAATAAACGTTTACAATGCCAGTGGAAAGCCCCAAATCTCCAAAGTTTCGAATGCGGCACTGAAACAAATGCACATGGCTCCTCAGTCTCGCCTATCTAATGGGTTTTCTACAGGTACAATCCTAACCCCATTTGCTTGTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003988 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0006996 GO:0007031 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009507 GO:0009514 GO:0009536 GO:0009611 GO:0009657 GO:0009694 GO:0009695 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010111 GO:0010646 GO:0010647 GO:0010817 GO:0016020 GO:0016042 GO:0016043 GO:0016053 GO:0016054 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019395 GO:0019752 GO:0023051 GO:0023056 GO:0030258 GO:0031090 GO:0031974 GO:0031981 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046395 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055114 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0072329 GO:0072330 GO:0098588 GO:0098805 GO:1901419 GO:1901421 GO:1901575 GO:1901576 GO:1905957 GO:1905959
KEGG Pathways
Metabolic & Signaling
ko00071 ko00280 ko00592 ko01040 ko01100 ko01110 ko01130 ko01212 ko03320 ko04146 map00071 map00280 map00592 map01040 map01100 map01110 map01130 map01212 map03320 map04146
Pfam Domains
Protein Families
Thiolase_C Thiolase_N

Protein Analysis

289

Amino Acids

30.98

Weight (kDa)

9.15

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thiolase_N PF00108 2 - 183 1.3e-45 Thiolase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 380, 578
AciI CCGC 1 cut(s) 779
AclI AACGTT 1 cut(s) 732
AclWI GGATC 1 cut(s) 365
AcsI RAATTY 1 cut(s) 567
AcuI CTGAAG 2 cut(s) 285, 476
AfaI GTAC 2 cut(s) 626, 841
AfiI CCNNNNNNNGG 3 cut(s) 380, 578, 664
AgsI TTSAA 6 cut(s) 77, 209, 279, 637, 671, 709
AjuI GAANNNNNNNTTGG 2 cut(s) 552, 584
AluBI AGCT 6 cut(s) 95, 137, 308, 454, 527, 594
AluI AGCT 6 cut(s) 95, 137, 308, 454, 527, 594
Alw26I GTCTC 1 cut(s) 816
AlwI GGATC 1 cut(s) 365
AlwNI CAGNNNCTG 2 cut(s) 86, 308
ApeKI GCWGC 4 cut(s) 5, 95, 305, 308
ApoI RAATTY 1 cut(s) 567
AspS9I GGNCC 3 cut(s) 442, 480, 655
AsuHPI GGTGA 2 cut(s) 235, 398
AsuII TTCGAA 2 cut(s) 424, 773
AvaII GGWCC 3 cut(s) 442, 480, 655
BbvI GCAGC 3 cut(s) 82, 295, 317
BccI CCATC 3 cut(s) 410, 470, 509
BclI TGATCA 1 cut(s) 618
BcoDI GTCTC 1 cut(s) 816
BfaI CTAG 3 cut(s) 138, 446, 501
BfmI CTRYAG 1 cut(s) 834
BglII AGATCT 1 cut(s) 201
BisI GCNGC 5 cut(s) 6, 96, 306, 309, 780
BlsI GCNGC 5 cut(s) 7, 97, 307, 310, 781
Bme18I GGWCC 3 cut(s) 442, 480, 655
BmgT120I GGNCC 3 cut(s) 442, 480, 655
BmiI GGNNCC 2 cut(s) 481, 804
BplI GAGNNNNNCTC 4 cut(s) 230, 262, 516, 548
BpmI CTGGAG 1 cut(s) 543
Bpu14I TTCGAA 2 cut(s) 424, 773
BsaBI GATNNNNATC 1 cut(s) 617
BsaJI CCNNGG 1 cut(s) 246
Bsc4I CCNNNNNNNGG 3 cut(s) 380, 578, 664
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 2 cut(s) 496, 744
Bse8I GATNNNNATC 1 cut(s) 617
BseDI CCNNGG 1 cut(s) 246
BseGI GGATG 1 cut(s) 187
BseJI GATNNNNATC 1 cut(s) 617
BseLI CCNNNNNNNGG 3 cut(s) 380, 578, 664
BseMII CTCAG 3 cut(s) 590, 600, 821
BseNI ACTGG 2 cut(s) 496, 744
BseRI GAGGAG 1 cut(s) 795
BseXI GCAGC 3 cut(s) 82, 295, 317
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 1 cut(s) 493
BslI CCNNNNNNNGG 3 cut(s) 380, 578, 664
BsmAI GTCTC 1 cut(s) 816
BsmFI GGGAC 1 cut(s) 493
BsmI GAATGC 1 cut(s) 781
Bsp119I TTCGAA 2 cut(s) 424, 773
Bsp143I GATC 5 cut(s) 201, 292, 370, 618, 687
BspACI CCGC 1 cut(s) 779
BspCNI CTCAG 3 cut(s) 591, 601, 820
BspLI GGNNCC 2 cut(s) 481, 804
BspPI GGATC 1 cut(s) 365
BspT104I TTCGAA 2 cut(s) 424, 773
BsrFI RCCGGY 1 cut(s) 37
BsrI ACTGG 2 cut(s) 496, 744
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 1 cut(s) 246
BssMI GATC 5 cut(s) 201, 292, 370, 618, 687
Bst4CI ACNGT 3 cut(s) 34, 49, 157
Bst6I CTCTTC 1 cut(s) 536
BstBI TTCGAA 2 cut(s) 424, 773
BstC8I GCNNGC 2 cut(s) 19, 596
BstDEI CTNAG 3 cut(s) 599, 609, 807
BstEII GGTNACC 1 cut(s) 241
BstF5I GGATG 1 cut(s) 187
BstKTI GATC 5 cut(s) 204, 295, 373, 621, 690
BstMAI GTCTC 1 cut(s) 816
BstMBI GATC 5 cut(s) 201, 292, 370, 618, 687
BstMWI GCNNNNNNNGC 3 cut(s) 14, 92, 305
BstPI GGTNACC 1 cut(s) 241
BstSFI CTRYAG 1 cut(s) 834
BstV1I GCAGC 3 cut(s) 82, 295, 317
BstX2I RGATCY 1 cut(s) 201
BstXI CCANNNNNNTGG 1 cut(s) 171
BstYI RGATCY 1 cut(s) 201
BtsCI GGATG 1 cut(s) 187
BtsIMutI CAGTG 2 cut(s) 751, 782
Cac8I GCNNGC 2 cut(s) 19, 596
CaiI CAGNNNCTG 2 cut(s) 86, 308
Cfr10I RCCGGY 1 cut(s) 37
Cfr13I GGNCC 3 cut(s) 442, 480, 655
Csp6I GTAC 2 cut(s) 625, 840
CspCI CAANNNNNGTGG 2 cut(s) 727, 762
CviAII CATG 4 cut(s) 151, 171, 659, 799
CviQI GTAC 2 cut(s) 625, 840
DdeI CTNAG 3 cut(s) 599, 609, 807
DpnI GATC 5 cut(s) 203, 294, 372, 620, 689
DpnII GATC 5 cut(s) 201, 292, 370, 618, 687
DraI TTTAAA 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 536
EarI CTCTTC 1 cut(s) 536
Eco47I GGWCC 3 cut(s) 442, 480, 655
Eco57I CTGAAG 2 cut(s) 285, 476
Eco91I GGTNACC 1 cut(s) 241
EcoO65I GGTNACC 1 cut(s) 241
EcoRI GAATTC 1 cut(s) 567
FaeI CATG 4 cut(s) 154, 174, 662, 802
FaiI YATR 9 cut(s) 15, 104, 120, 152, 172, 236, 629, 660, 800
FaqI GGGAC 1 cut(s) 493
FatI CATG 4 cut(s) 150, 170, 658, 798
FbaI TGATCA 1 cut(s) 618
Fnu4HI GCNGC 5 cut(s) 6, 96, 306, 309, 780
FokI GGATG 1 cut(s) 194
Fsp4HI GCNGC 5 cut(s) 6, 96, 306, 309, 780
FspBI CTAG 3 cut(s) 138, 446, 501
GluI GCNGC 5 cut(s) 6, 96, 306, 309, 780
GsuI CTGGAG 1 cut(s) 543
HapII CCGG 1 cut(s) 38
Hin1II CATG 4 cut(s) 154, 174, 662, 802
HinfI GANTC 3 cut(s) 146, 421, 613
HpaII CCGG 1 cut(s) 38
HphI GGTGA 2 cut(s) 235, 398
Hpy166II GTNNAC 3 cut(s) 52, 160, 736
Hpy188I TCNGA 5 cut(s) 250, 442, 610, 618, 699
Hpy188III TCNNGA 1 cut(s) 535
Hpy8I GTNNAC 3 cut(s) 52, 160, 736
HpyAV CCTTC 4 cut(s) 170, 236, 631, 658
HpyCH4III ACNGT 3 cut(s) 34, 49, 157
HpyCH4IV ACGT 1 cut(s) 732
HpyCH4V TGCA 2 cut(s) 718, 796
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 92, 305
HpyF3I CTNAG 3 cut(s) 599, 609, 807
HpySE526I ACGT 1 cut(s) 732
Hsp92II CATG 4 cut(s) 154, 174, 662, 802
Ksp22I TGATCA 1 cut(s) 618
Kzo9I GATC 5 cut(s) 201, 292, 370, 618, 687
LmnI GCTCC 5 cut(s) 134, 286, 524, 640, 808
Lsp1109I GCAGC 3 cut(s) 82, 295, 317
MaeI CTAG 3 cut(s) 138, 446, 501
MaeII ACGT 1 cut(s) 732
MaeIII GTNAC 2 cut(s) 241, 397
MalI GATC 5 cut(s) 203, 294, 372, 620, 689
MboI GATC 5 cut(s) 201, 292, 370, 618, 687
MboII GAAGA 3 cut(s) 221, 553, 697
MflI RGATCY 1 cut(s) 201
MluCI AATT 6 cut(s) 187, 220, 342, 496, 567, 573
MmeI TCCRAC 3 cut(s) 123, 420, 633
MnlI CCTC 3 cut(s) 232, 256, 816
MseI TTAA 3 cut(s) 186, 333, 468
MspA1I CMGCKG 1 cut(s) 308
MspI CCGG 1 cut(s) 38
Mva1269I GAATGC 1 cut(s) 781
MwoI GCNNNNNNNGC 3 cut(s) 14, 92, 305
NdeII GATC 5 cut(s) 201, 292, 370, 618, 687
NlaIII CATG 4 cut(s) 154, 174, 662, 802
NlaIV GGNNCC 2 cut(s) 481, 804
NmuCI GTSAC 1 cut(s) 241
NspV TTCGAA 2 cut(s) 424, 773
PctI GAATGC 1 cut(s) 781
PfeI GAWTC 3 cut(s) 146, 421, 613
PflMI CCANNNNNTGG 2 cut(s) 380, 578
PkrI GCNGC 5 cut(s) 7, 97, 307, 310, 781
Psp1406I AACGTT 1 cut(s) 732
PspEI GGTNACC 1 cut(s) 241
PspN4I GGNNCC 2 cut(s) 481, 804
PspPI GGNCC 3 cut(s) 442, 480, 655
PstNI CAGNNNCTG 2 cut(s) 86, 308
PsuI RGATCY 1 cut(s) 201
PvuII CAGCTG 1 cut(s) 308
RsaI GTAC 2 cut(s) 626, 841
RsaNI GTAC 2 cut(s) 625, 840
SaqAI TTAA 3 cut(s) 186, 333, 468
SatI GCNGC 5 cut(s) 6, 96, 306, 309, 780
Sau3AI GATC 5 cut(s) 201, 292, 370, 618, 687
Sau96I GGNCC 3 cut(s) 442, 480, 655
SfcI CTRYAG 1 cut(s) 834
SfuI TTCGAA 2 cut(s) 424, 773
SinI GGWCC 3 cut(s) 442, 480, 655
Sse9I AATT 6 cut(s) 187, 220, 342, 496, 567, 573
SsiI CCGC 1 cut(s) 779
SspMI CTAG 3 cut(s) 138, 446, 501
TaaI ACNGT 3 cut(s) 34, 49, 157
TaiI ACGT 1 cut(s) 735
TaqI TCGA 2 cut(s) 424, 773
TasI AATT 6 cut(s) 187, 220, 342, 496, 567, 573
TatI WGTACW 1 cut(s) 624
TauI GCSGC 1 cut(s) 782
TfiI GAWTC 3 cut(s) 146, 421, 613
Tru1I TTAA 3 cut(s) 186, 333, 468
Tru9I TTAA 3 cut(s) 186, 333, 468
TscAI CASTG 2 cut(s) 751, 789
TseFI GTSAC 1 cut(s) 241
TseI GCWGC 4 cut(s) 5, 95, 305, 308
Tsp45I GTSAC 1 cut(s) 241
TspDTI ATGAA 2 cut(s) 354, 554
TspGWI ACGGA 1 cut(s) 397
TspRI CASTG 2 cut(s) 751, 789
Van91I CCANNNNNTGG 2 cut(s) 380, 578
VpaK11BI GGWCC 3 cut(s) 442, 480, 655
XapI RAATTY 1 cut(s) 567
XspI CTAG 3 cut(s) 138, 446, 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.