Rroxscaffold_2G00149270

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
86888083 .. 86891470
3388 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00149270.1

Sequence Viewer

Length: 1560 bp
ATGGACTCTCTCTACTCTTCTTCGTCTGCCATCATTTCTCTGAAGTCTCCAGGTTCGGATTCAAGCTCTGTTTCTAGGAACTCGTTCACGTGTTTTTCCGGGTCGGGTCATAAAGTCGGGTCGTCTGGTGTTGTCATGGATCGTAAGGCTAAGATTGTGGAGGGGGACAATGGCTACGTTCTTGAAGACGTGCCGCATTTCTCTGATTACATTCCCAATCTTCCGACTTACCCAAATCCATTGCAAGACAATCCTGCATACTCTGTAGTCAAGCAGTACTTTGTTAATATGGATGATACTGTTGCCCAAAAGATTATTGGTCACAAGAATAGTCCAAGGGGCATCCATTTTCGGCGTGCTGGACCACGTCAAAGAGTCTATTTTGAGGCTGAGGATGTTCATGCGTGTATTGTGACTTGTGGGGGTCTATGCCCTGGACTCAACACTGTGATTAGGGAGATCGTATGTGGTTTGCACCATATGTATGGTGTAAAGAAAGTTTCAGGGATAGTAGGAGGATACAAGGGTTTCTATTCTCAAAACATAATATCTTTGACTCCAAAGAGTGTGAATGATATCCACAAACGCGGTGGAACCATCCTTGGGACATCAAGGGGTGGCCATGACAAATCAAAGATAGTTGATAGCATTAAAGATCGAGGAATCAATCAGGTTTACATAATTGGAGGAGATGGAACCCAGAAGGGAGCATCTGTAATATATGAGGAAATTAAAAGACGTGGTCTCAAAGTAGTAGTTGCTGGAATCCCCAAAACCATTGATAATGACATTCCGGTGATTGACAAATCCTTTGGCTTTGACTCTGCTGTTGAGGAGGCTCAACGTGCAATTAATGCAGCACATGTTGAATCTGAAAGCTTTGAGAATTGTATTGGTGTTGTGAAGGTGATGGGTCGCTATAGTGGGTTTATTGCCATGTATGCAACGCTTGCAAGCCGAGATGTAGACTGTTGCTTGATTCCAGAATCACCCTTCTATCTTGAGGGTCCTGGTGGACTTTTTGAATACATAGAGAAACGACTCAAAGAAAATGGGCACATGGTTATTGTCATTGCTGAAGGTGCTGGGCAGGAGCTTCTATCTGAAAGCATAAACTCTATGGACAAACAGGATGCTTCAGGAAACAAGCTCCTCCAAGATGTAGGCCTATGGATTTCCCAGAAGATCAAGGATCACTTCTCGAAAAAAAGTAAAATGGCGATAAACCTCAAATATATAGATCCTACATATATGATCCGAGCTATTCCGAGCAATGGTTCTGATAATGTGTACTGCACACTCCTTGCTCAAAGTGCTGTCCATGGAGCAATGGCAGGCTACACAGGATTTATAGTAGGTCCTGTCAATGGGAGACACTCTTATATACCCTTTCATAGAATCACCGAGGAGCAGCACCAGGTTGTGATAACAGACCGAATGTGGGCTCGGCTCCTATCTTCCACACACCAACCAAGTTTCCTGAGTACTATAGATGTCATTGAGGACAAGAGAGATGAAGTTCATCAGGAACATTGTTCAGATAACAACTTGGTGAACTAG

Protein Analysis

519

Amino Acids

56.9

Weight (kDa)

6.83

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 136 - 441 1.5e-63 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 966
AccII CGCG 1 cut(s) 588
AciI CCGC 2 cut(s) 194, 588
AclWI GGATC 4 cut(s) 147, 1200, 1235, 1249
AcoI YGGCCR 1 cut(s) 619
AcuI CTGAAG 3 cut(s) 62, 1098, 1122
AcvI CACGTG 1 cut(s) 90
AfaI GTAC 3 cut(s) 278, 1292, 1486
AfiI CCNNNNNNNGG 4 cut(s) 603, 1274, 1367, 1441
AflIII ACRYGT 2 cut(s) 89, 862
AgsI TTSAA 4 cut(s) 63, 185, 869, 1025
AjiI CACGTC 3 cut(s) 190, 368, 740
AjnI CCWGG 4 cut(s) 49, 433, 1009, 1416
AluBI AGCT 5 cut(s) 66, 879, 1096, 1150, 1262
AluI AGCT 5 cut(s) 66, 879, 1096, 1150, 1262
Alw26I GTCTC 3 cut(s) 51, 749, 1366
AlwI GGATC 4 cut(s) 147, 1200, 1235, 1249
AoxI GGCC 2 cut(s) 619, 1165
ApeKI GCWGC 2 cut(s) 857, 1411
ArsI GACNNNNNNTTYG 2 cut(s) 794, 826
AseI ATTAAT 1 cut(s) 852
Asp700I GAANNNNTTC 1 cut(s) 83
AspS9I GGNCC 3 cut(s) 362, 1007, 1358
AsuC2I CCSGG 1 cut(s) 100
AsuHPI GGTGA 4 cut(s) 808, 919, 981, 1393
AvaII GGWCC 3 cut(s) 362, 1007, 1358
BaeGI GKGCMC 1 cut(s) 1059
BaeI ACNNNNGTAYC 2 cut(s) 511, 544
BalI TGGCCA 1 cut(s) 621
BanII GRGCYC 1 cut(s) 1447
BbrPI CACGTG 1 cut(s) 90
BbsI GAAGAC 1 cut(s) 192
BbvCI CCTCAGC 1 cut(s) 390
BbvI GCAGC 2 cut(s) 869, 1423
BccI CCATC 4 cut(s) 38, 605, 686, 904
BciT130I CCWGG 4 cut(s) 51, 435, 1011, 1418
BciVI GTATCC 1 cut(s) 512
BcnI CCSGG 1 cut(s) 100
BcoDI GTCTC 3 cut(s) 51, 749, 1366
BfaI CTAG 2 cut(s) 75, 1558
BfmI CTRYAG 3 cut(s) 264, 919, 1488
BfuI GTATCC 1 cut(s) 512
BisI GCNGC 3 cut(s) 194, 858, 1412
BlsI GCNGC 3 cut(s) 195, 859, 1413
BmcAI AGTACT 2 cut(s) 278, 1486
Bme1390I CCNGG 5 cut(s) 51, 100, 435, 1011, 1418
Bme18I GGWCC 3 cut(s) 362, 1007, 1358
BmgBI CACGTC 3 cut(s) 190, 368, 740
BmgT120I GGNCC 3 cut(s) 362, 1007, 1358
BmiI GGNNCC 4 cut(s) 595, 697, 1008, 1451
BmrFI CCNGG 5 cut(s) 51, 100, 435, 1011, 1418
BmsI GCATC 3 cut(s) 351, 719, 1123
BpiI GAAGAC 1 cut(s) 192
BpmI CTGGAG 1 cut(s) 33
Bpu10I CCTNAGC 1 cut(s) 390
BpuEI CTTGAG 1 cut(s) 1022
BpuMI CCSGG 1 cut(s) 100
BsaAI YACGTR 1 cut(s) 90
BsaI GGTCTC 1 cut(s) 749
BsaJI CCNNGG 5 cut(s) 335, 433, 601, 1321, 1404
BsaWI WCCGGW 1 cut(s) 793
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 4 cut(s) 603, 1274, 1367, 1441
Bse3DI GCAATG 4 cut(s) 239, 1071, 1279, 1335
BseBI CCWGG 4 cut(s) 51, 435, 1011, 1418
BseDI CCNNGG 5 cut(s) 335, 433, 601, 1321, 1404
BseGI GGATG 5 cut(s) 298, 342, 400, 597, 1138
BseLI CCNNNNNNNGG 4 cut(s) 603, 1274, 1367, 1441
BseMI GCAATG 4 cut(s) 239, 1071, 1279, 1335
BseMII CTCAG 2 cut(s) 381, 1472
BseRI GAGGAG 4 cut(s) 702, 848, 1142, 1421
BseSI GKGCMC 1 cut(s) 1059
BseXI GCAGC 2 cut(s) 869, 1423
BseYI CCCAGC 1 cut(s) 1085
BsgI GTGCAG 1 cut(s) 1279
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 2 cut(s) 621, 1167
BsiSI CCGG 2 cut(s) 99, 794
BslFI GGGAC 2 cut(s) 179, 619
BslI CCNNNNNNNGG 4 cut(s) 603, 1274, 1367, 1441
BsmAI GTCTC 3 cut(s) 51, 749, 1366
BsmFI GGGAC 2 cut(s) 179, 619
BsnI GGCC 2 cut(s) 621, 1167
Bso31I GGTCTC 1 cut(s) 749
Bsp1286I GDGCHC 2 cut(s) 1059, 1447
Bsp143I GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
Bsp19I CCATGG 1 cut(s) 1321
BspACI CCGC 2 cut(s) 194, 588
BspANI GGCC 2 cut(s) 621, 1167
BspCNI CTCAG 2 cut(s) 382, 1473
BspFNI CGCG 1 cut(s) 588
BspLI GGNNCC 4 cut(s) 595, 697, 1008, 1451
BspPI GGATC 4 cut(s) 147, 1200, 1235, 1249
BspTNI GGTCTC 1 cut(s) 749
BsrDI GCAATG 4 cut(s) 239, 1071, 1279, 1335
BssECI CCNNGG 5 cut(s) 335, 433, 601, 1321, 1404
BssMI GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
BssT1I CCWWGG 3 cut(s) 335, 601, 1321
Bst2UI CCWGG 4 cut(s) 51, 435, 1011, 1418
Bst4CI ACNGT 3 cut(s) 301, 448, 971
Bst6I CTCTTC 1 cut(s) 22
BstAPI GCANNNNNTGC 2 cut(s) 854, 950
BstBAI YACGTR 1 cut(s) 90
BstC8I GCNNGC 4 cut(s) 357, 951, 955, 1336
BstDEI CTNAG 3 cut(s) 150, 390, 1481
BstDSI CCRYGG 1 cut(s) 1321
BstF5I GGATG 5 cut(s) 298, 342, 400, 597, 1138
BstFNI CGCG 1 cut(s) 588
BstKTI GATC 7 cut(s) 142, 462, 658, 1188, 1195, 1243, 1257
BstMAI GTCTC 3 cut(s) 51, 749, 1366
BstMBI GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
BstMWI GCNNNNNNNGC 6 cut(s) 845, 854, 941, 950, 1082, 1313
BstNI CCWGG 4 cut(s) 51, 435, 1011, 1418
BstNSI RCATGY 1 cut(s) 866
BstSCI CCNGG 5 cut(s) 49, 98, 433, 1009, 1416
BstSFI CTRYAG 3 cut(s) 264, 919, 1488
BstSLI GKGCMC 1 cut(s) 1059
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 2 cut(s) 869, 1423
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 1240
BstXI CCANNNNNNTGG 1 cut(s) 485
BstYI RGATCY 1 cut(s) 1240
BsuI GTATCC 1 cut(s) 512
BsuRI GGCC 2 cut(s) 621, 1167
BtgI CCRYGG 1 cut(s) 1321
BtrI CACGTC 3 cut(s) 190, 368, 740
BtsCI GGATG 5 cut(s) 298, 342, 400, 597, 1138
BtsIMutI CAGTG 1 cut(s) 444
Cac8I GCNNGC 4 cut(s) 357, 951, 955, 1336
Cfr13I GGNCC 3 cut(s) 362, 1007, 1358
CsiI ACCWGGT 1 cut(s) 1416
Csp6I GTAC 3 cut(s) 277, 1291, 1485
CspCI CAANNNNNGTGG 2 cut(s) 571, 606
CviAII CATG 7 cut(s) 136, 401, 623, 863, 937, 1060, 1322
CviQI GTAC 3 cut(s) 277, 1291, 1485
DdeI CTNAG 3 cut(s) 150, 390, 1481
DpnI GATC 7 cut(s) 141, 461, 657, 1187, 1194, 1242, 1256
DpnII GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
EaeI YGGCCR 1 cut(s) 619
Eam1104I CTCTTC 1 cut(s) 22
EarI CTCTTC 1 cut(s) 22
Eco130I CCWWGG 3 cut(s) 335, 601, 1321
Eco147I AGGCCT 1 cut(s) 1167
Eco24I GRGCYC 1 cut(s) 1447
Eco31I GGTCTC 1 cut(s) 749
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 3 cut(s) 362, 1007, 1358
Eco57I CTGAAG 3 cut(s) 62, 1098, 1122
Eco72I CACGTG 1 cut(s) 90
EcoO109I RGGNCCY 2 cut(s) 1007, 1358
EcoRII CCWGG 4 cut(s) 49, 433, 1009, 1416
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 3 cut(s) 335, 601, 1321
EcoT38I GRGCYC 1 cut(s) 1447
ErhI CCWWGG 3 cut(s) 335, 601, 1321
FaeI CATG 7 cut(s) 139, 404, 626, 866, 940, 1063, 1325
FalI AAGNNNNNCTT 4 cut(s) 263, 295, 1181, 1213
FaqI GGGAC 2 cut(s) 179, 619
FatI CATG 7 cut(s) 135, 400, 622, 862, 936, 1059, 1321
FauNDI CATATG 1 cut(s) 480
FblI GTMKAC 1 cut(s) 966
Fnu4HI GCNGC 3 cut(s) 194, 858, 1412
FokI GGATG 5 cut(s) 305, 329, 407, 584, 1145
FriOI GRGCYC 1 cut(s) 1447
Fsp4HI GCNGC 3 cut(s) 194, 858, 1412
FspBI CTAG 2 cut(s) 75, 1558
GluI GCNGC 3 cut(s) 194, 858, 1412
GsaI CCCAGC 1 cut(s) 1089
GsuI CTGGAG 1 cut(s) 33
HaeIII GGCC 2 cut(s) 621, 1167
HapII CCGG 2 cut(s) 99, 794
Hin1II CATG 7 cut(s) 139, 404, 626, 866, 940, 1063, 1325
HindIII AAGCTT 1 cut(s) 877
HpaII CCGG 2 cut(s) 99, 794
HphI GGTGA 4 cut(s) 808, 919, 981, 1393
Hpy166II GTNNAC 6 cut(s) 87, 676, 967, 1016, 1291, 1555
Hpy188III TCNNGA 7 cut(s) 182, 983, 1001, 1140, 1201, 1480, 1526
Hpy8I GTNNAC 6 cut(s) 87, 676, 967, 1016, 1291, 1555
HpyAV CCTTC 4 cut(s) 697, 898, 1003, 1073
HpyCH4III ACNGT 3 cut(s) 301, 448, 971
HpyCH4IV ACGT 6 cut(s) 89, 177, 189, 367, 739, 844
HpyCH4V TGCA 8 cut(s) 244, 257, 475, 848, 857, 944, 953, 1296
HpyF10VI GCNNNNNNNGC 6 cut(s) 845, 854, 941, 950, 1082, 1313
HpyF3I CTNAG 3 cut(s) 150, 390, 1481
HpySE526I ACGT 6 cut(s) 89, 177, 189, 367, 739, 844
Hsp92II CATG 7 cut(s) 139, 404, 626, 866, 940, 1063, 1325
Kzo9I GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
LmnI GCTCC 6 cut(s) 707, 1093, 1155, 1325, 1408, 1455
Lsp1109I GCAGC 2 cut(s) 869, 1423
LweI GCATC 3 cut(s) 351, 719, 1123
MabI ACCWGGT 1 cut(s) 1416
MaeI CTAG 2 cut(s) 75, 1558
MaeII ACGT 6 cut(s) 89, 177, 189, 367, 739, 844
MaeIII GTNAC 2 cut(s) 320, 412
MalI GATC 7 cut(s) 141, 461, 657, 1187, 1194, 1242, 1256
MboI GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
MboII GAAGA 6 cut(s) 9, 12, 197, 212, 1195, 1449
MflI RGATCY 1 cut(s) 1240
MhlI GDGCHC 2 cut(s) 1059, 1447
MlsI TGGCCA 1 cut(s) 621
MluCI AATT 4 cut(s) 681, 729, 849, 886
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 5 cut(s) 384, 432, 550, 815, 1035
MmeI TCCRAC 1 cut(s) 248
Mox20I TGGCCA 1 cut(s) 621
MroXI GAANNNNTTC 1 cut(s) 83
MscI TGGCCA 1 cut(s) 621
MseI TTAA 4 cut(s) 285, 651, 732, 852
MslI CAYNNNNRTG 2 cut(s) 483, 794
Msp20I TGGCCA 1 cut(s) 621
MspI CCGG 2 cut(s) 99, 794
MspR9I CCNGG 5 cut(s) 51, 100, 435, 1011, 1418
MvaI CCWGG 4 cut(s) 51, 435, 1011, 1418
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 6 cut(s) 845, 854, 941, 950, 1082, 1313
NciI CCSGG 1 cut(s) 100
NcoI CCATGG 1 cut(s) 1321
NdeI CATATG 1 cut(s) 480
NdeII GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
NlaIII CATG 7 cut(s) 139, 404, 626, 866, 940, 1063, 1325
NlaIV GGNNCC 4 cut(s) 595, 697, 1008, 1451
NmeAIII GCCGAG 2 cut(s) 983, 1426
NmuCI GTSAC 2 cut(s) 320, 412
NspI RCATGY 1 cut(s) 866
PceI AGGCCT 1 cut(s) 1167
PciI ACATGT 1 cut(s) 862
PdmI GAANNNNTTC 1 cut(s) 83
PfeI GAWTC 7 cut(s) 59, 663, 765, 869, 979, 986, 1398
PflFI GACNNNGTC 2 cut(s) 366, 741
PkrI GCNGC 3 cut(s) 195, 859, 1413
PleI GAGTC 5 cut(s) 383, 432, 550, 815, 1035
PmaCI CACGTG 1 cut(s) 90
PmlI CACGTG 1 cut(s) 90
PpsI GAGTC 5 cut(s) 383, 432, 550, 815, 1035
Ppu21I YACGTR 1 cut(s) 90
PpuMI RGGWCCY 2 cut(s) 1007, 1358
PscI ACATGT 1 cut(s) 862
PshBI ATTAAT 1 cut(s) 852
Psp5II RGGWCCY 2 cut(s) 1007, 1358
Psp6I CCWGG 4 cut(s) 49, 433, 1009, 1416
PspCI CACGTG 1 cut(s) 90
PspFI CCCAGC 1 cut(s) 1085
PspGI CCWGG 4 cut(s) 49, 433, 1009, 1416
PspN4I GGNNCC 4 cut(s) 595, 697, 1008, 1451
PspPI GGNCC 3 cut(s) 362, 1007, 1358
PspPPI RGGWCCY 2 cut(s) 1007, 1358
PsuI RGATCY 1 cut(s) 1240
PsyI GACNNNGTC 2 cut(s) 366, 741
RsaI GTAC 3 cut(s) 278, 1292, 1486
RsaNI GTAC 3 cut(s) 277, 1291, 1485
RseI CAYNNNNRTG 2 cut(s) 483, 794
SaqAI TTAA 4 cut(s) 285, 651, 732, 852
SatI GCNGC 3 cut(s) 194, 858, 1412
Sau3AI GATC 7 cut(s) 139, 459, 655, 1185, 1192, 1240, 1254
Sau96I GGNCC 3 cut(s) 362, 1007, 1358
ScaI AGTACT 2 cut(s) 278, 1486
SchI GAGTC 5 cut(s) 384, 432, 550, 815, 1035
ScrFI CCNGG 5 cut(s) 51, 100, 435, 1011, 1418
SduI GDGCHC 2 cut(s) 1059, 1447
SexAI ACCWGGT 1 cut(s) 1416
SfaNI GCATC 3 cut(s) 351, 719, 1123
SfcI CTRYAG 3 cut(s) 264, 919, 1488
SinI GGWCC 3 cut(s) 362, 1007, 1358
SmiMI CAYNNNNRTG 2 cut(s) 483, 794
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
Sse9I AATT 4 cut(s) 681, 729, 849, 886
SseBI AGGCCT 1 cut(s) 1167
SsiI CCGC 2 cut(s) 194, 588
SspMI CTAG 2 cut(s) 75, 1558
StuI AGGCCT 1 cut(s) 1167
StyD4I CCNGG 5 cut(s) 49, 98, 433, 1009, 1416
StyI CCWWGG 3 cut(s) 335, 601, 1321
TaaI ACNGT 3 cut(s) 301, 448, 971
TaiI ACGT 6 cut(s) 92, 180, 192, 370, 742, 847
TaqI TCGA 2 cut(s) 658, 1202
TaqII GACCGA 1 cut(s) 1449
TasI AATT 4 cut(s) 681, 729, 849, 886
TatI WGTACW 3 cut(s) 276, 1290, 1484
TauI GCSGC 1 cut(s) 196
TfiI GAWTC 7 cut(s) 59, 663, 765, 869, 979, 986, 1398
Tru1I TTAA 4 cut(s) 285, 651, 732, 852
Tru9I TTAA 4 cut(s) 285, 651, 732, 852
TscAI CASTG 1 cut(s) 451
TseFI GTSAC 2 cut(s) 320, 412
TseI GCWGC 2 cut(s) 857, 1411
Tsp45I GTSAC 2 cut(s) 320, 412
TspDTI ATGAA 4 cut(s) 389, 1382, 1511, 1530
TspRI CASTG 1 cut(s) 451
Tth111I GACNNNGTC 2 cut(s) 366, 741
VpaK11BI GGWCC 3 cut(s) 362, 1007, 1358
VspI ATTAAT 1 cut(s) 852
XceI RCATGY 1 cut(s) 866
XcmI CCANNNNNNNNNTGG 2 cut(s) 314, 587
XmiI GTMKAC 1 cut(s) 966
XmnI GAANNNNTTC 1 cut(s) 83
XspI CTAG 2 cut(s) 75, 1558
ZrmI AGTACT 2 cut(s) 278, 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.