Rw2G034210

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
56170901 .. 56177071
6171 bp
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UTR
Exon/CDS
Intron
Rw2G034210.1

Sequence Viewer

Length: 1632 bp
ATGGCCACCACTCCACGGTTCCGCTGCTTCGACCCCACCAACTCTTACGCTGCGAAGCCCGATCACCCCCGCCGCTTCAGCACCACCTCCAATTCAACTCCCAAGTACTACAACAACAACAACTCCAAGGGCACTATGGGAATTTCCGCCAACTCCGAGCCCAAGATCATCACCGGCGACGCTGGCTACGTTCTCGAAGACGTCCCTCACTTGTCCGATTACATCCCCGATCTCCCTACATATCCCAATCCATTACAGGACAATCCTTCCTATTCAGTTGTTAAGCAGTATTTCGTTAATGTCGATGATAGTGTTGCCCAGACGATTGTAGTCCAGAAAGATAGTCCAAGAGGCACACATTTTCGACGTGCTGGACCGCGTCAGAAGGTCTATTTTGAACCAGATGATGTTCGTGCATGTATTGTGACATGTGGTGGTTTATGTCCAGGCTTAAATACAGTAATTAGAGAAATAGTATGTGGGTTGTACTACATGTATGGTGTCCACCGAATTCTTGGAATAGAGGGCGGATACAGAGGGTTTTATGCCAGAAATACAATTCCCTTAACACCAAAGGTTGTGAATGACATCCATAAACGTGGTGGCACCATCCTTGGGACATCACGAGGTGGCCATGATACCTCAAAGATTGTGGACAGCATTCAGGACAGAGGAATTAATCAGGTTTACATACTTGGGGGAGACGGTACACAGAAAGGAGCTTCTGTAATATTTGAGGAATGCAGGAGGCGTGGCCTCAATGTTGCAGTGGCAGGAATTCCAAAAACCATTGATAATGATATTCCGGTTATAGACAAGTCCTTTGGTTTTGACACTGCTGTTGAGGAGGCTCAACGAGCCATTAATGCAGCTCATGTTGAAGCAGAAAGCATTGAGAATGGTATCGGCGTTGTCAAGTTAATGGGTCGCTACAGTGGATTTATAGCTATGTATGCTACTCTTGCCAGCCGAGATGTGGATTGTTGCCTGATTCCAGAGTCGCCTTTCTATCTGGAAGGAGCAGGTGGATTGTTTGAGTACATTGAAAAAAGACTTAAAGAGAACGGCCACATGGTTATAGTAATCGCTGAAGGCGCAGGACAAGAGCTTCTTGCTGAAAGCAGGCTTGCTATGAATCATCAGGACGCTTCTGGAAATAAGCTTCTTCAAGATTCTGGTCTGTGGTTATCGCAGAAGATTAAGGACCACTTCTCAAAACTGAACAAGATGTCTATAAATCTCAAATATATAGATCCTACTTACATGATCCGTGCTATTCCAAGCAATGCATCTGATAATGTATACTGCACCCTCCTTGCTCATAGTGTGGTTCATGGTGCAATGGCAGGATACACTGGCTTCACCGTCGGCTCTGTTAATGGAAGGCATGCTTATATTCCTTTCCATCGGGTGACGGAGAGACAGAACAGGGTTGTGATTACTGACAGAATGTGGGCACGGCTATTATCATCAACTCATCAGCCAAGTTTCTTGGATCCGAAGGAAGTAGCTAAAAATAAGGGGGAAGAAACAGAAACCCACCTGGTCAATGGGGAAAACCATTTGGAGGAAACTGCTTCGGCTACGCCAAAGGAAGTAGGAAACCAACAAGCAACTTATTCTGGAAATTGA

Protein Analysis

543

Amino Acids

59.76

Weight (kDa)

6.79

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 139 - 445 2.3e-62 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1013
AatII GACGTC 1 cut(s) 204
Acc36I ACCTGC 1 cut(s) 1013
AccB1I GGYRCC 1 cut(s) 605
AccI GTMKAC 1 cut(s) 1302
AccII CGCG 1 cut(s) 379
AciI CCGC 6 cut(s) 22, 70, 73, 147, 377, 528
AclWI GGATC 4 cut(s) 1247, 1261, 1490, 1503
AcoI YGGCCR 3 cut(s) 3, 631, 1066
AcsI RAATTY 3 cut(s) 141, 510, 777
AcuI CTGAAG 2 cut(s) 61, 1110
AcyI GRCGYC 1 cut(s) 201
AdeI CACNNNGTG 1 cut(s) 629
AfaI GTAC 4 cut(s) 107, 488, 709, 1040
AfiI CCNNNNNNNGG 4 cut(s) 15, 615, 976, 1567
AflIII ACRYGT 2 cut(s) 428, 492
AgsI TTSAA 5 cut(s) 96, 398, 881, 1046, 1169
AjiI CACGTC 1 cut(s) 368
AjnI CCWGG 2 cut(s) 445, 1542
AluBI AGCT 6 cut(s) 722, 872, 947, 1108, 1162, 1511
AluI AGCT 6 cut(s) 722, 872, 947, 1108, 1162, 1511
Alw26I GTCTC 2 cut(s) 696, 1414
AlwI GGATC 4 cut(s) 1247, 1261, 1490, 1503
AoxI GGCC 4 cut(s) 3, 631, 754, 1066
ApeKI GCWGC 3 cut(s) 24, 50, 869
ApoI RAATTY 3 cut(s) 141, 510, 777
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AseI ATTAAT 2 cut(s) 678, 864
AspLEI GCGC 1 cut(s) 1097
AspS9I GGNCC 2 cut(s) 374, 1204
AsuHPI GGTGA 4 cut(s) 56, 163, 1354, 1423
AvaII GGWCC 2 cut(s) 374, 1204
BaeGI GKGCMC 2 cut(s) 134, 1459
BalI TGGCCA 2 cut(s) 5, 633
BamHI GGATCC 1 cut(s) 1495
BanI GGYRCC 1 cut(s) 605
BanII GRGCYC 1 cut(s) 162
BauI CACGAG 1 cut(s) 624
BbsI GAAGAC 1 cut(s) 204
BbvI GCAGC 3 cut(s) 11, 37, 881
BccI CCATC 2 cut(s) 617, 1413
BceAI ACGGC 2 cut(s) 1081, 1475
BciT130I CCWGG 2 cut(s) 447, 1544
BciVI GTATCC 2 cut(s) 524, 1343
BcoDI GTCTC 2 cut(s) 696, 1414
BfmI CTRYAG 1 cut(s) 931
BfuAI ACCTGC 1 cut(s) 1013
BfuI GTATCC 2 cut(s) 524, 1343
BisI GCNGC 4 cut(s) 25, 51, 73, 870
BlsI GCNGC 4 cut(s) 26, 52, 74, 871
BmcAI AGTACT 1 cut(s) 107
Bme1390I CCNGG 2 cut(s) 447, 1544
Bme18I GGWCC 2 cut(s) 374, 1204
BmgBI CACGTC 1 cut(s) 368
BmgT120I GGNCC 2 cut(s) 374, 1204
BmiI GGNNCC 3 cut(s) 20, 607, 1497
BmrFI CCNGG 2 cut(s) 447, 1544
BmsI GCATC 1 cut(s) 1298
BpiI GAAGAC 1 cut(s) 204
BsaHI GRCGYC 1 cut(s) 201
BsaJI CCNNGG 3 cut(s) 14, 126, 613
BsaWI WCCGGW 1 cut(s) 805
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 711, 741
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 615, 976, 1567
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 1360
Bse3DI GCAATG 2 cut(s) 1291, 1347
BseBI CCWGG 2 cut(s) 447, 1544
BseDI CCNNGG 3 cut(s) 14, 126, 613
BseGI GGATG 3 cut(s) 222, 588, 609
BseLI CCNNNNNNNGG 4 cut(s) 15, 615, 976, 1567
BseMI GCAATG 2 cut(s) 1291, 1347
BseNI ACTGG 1 cut(s) 1360
BseRI GAGGAG 1 cut(s) 860
BseSI GKGCMC 2 cut(s) 134, 1459
BseXI GCAGC 3 cut(s) 11, 37, 881
BsgI GTGCAG 1 cut(s) 1291
Bsh1236I CGCG 1 cut(s) 379
BshFI GGCC 4 cut(s) 5, 633, 756, 1068
BshNI GGYRCC 1 cut(s) 605
BsiSI CCGG 2 cut(s) 174, 806
BslFI GGGAC 2 cut(s) 188, 631
BslI CCNNNNNNNGG 4 cut(s) 15, 615, 976, 1567
BsmAI GTCTC 2 cut(s) 696, 1414
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 188, 631
BsmI GAATGC 2 cut(s) 660, 746
BsnI GGCC 4 cut(s) 5, 633, 756, 1068
Bsp1286I GDGCHC 3 cut(s) 134, 162, 1459
Bsp143I GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
BspACI CCGC 6 cut(s) 22, 70, 73, 147, 377, 528
BspANI GGCC 4 cut(s) 5, 633, 756, 1068
BspFNI CGCG 1 cut(s) 379
BspLI GGNNCC 3 cut(s) 20, 607, 1497
BspMI ACCTGC 1 cut(s) 1013
BspPI GGATC 4 cut(s) 1247, 1261, 1490, 1503
BspT107I GGYRCC 1 cut(s) 605
BsrDI GCAATG 2 cut(s) 1291, 1347
BsrFI RCCGGY 1 cut(s) 173
BsrI ACTGG 1 cut(s) 1360
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 3 cut(s) 14, 126, 613
BssMI GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
BssNAI GTATAC 1 cut(s) 1303
BssNI GRCGYC 1 cut(s) 201
BssSI CACGAG 1 cut(s) 624
BssT1I CCWWGG 2 cut(s) 126, 613
Bst1107I GTATAC 1 cut(s) 1303
Bst2BI CACGAG 1 cut(s) 624
Bst2UI CCWGG 2 cut(s) 447, 1544
Bst4CI ACNGT 5 cut(s) 18, 460, 707, 935, 1366
BstACI GRCGYC 1 cut(s) 201
BstC8I GCNNGC 5 cut(s) 184, 967, 1124, 1128, 1389
BstDSI CCRYGG 1 cut(s) 14
BstF5I GGATG 3 cut(s) 222, 588, 609
BstFNI CGCG 1 cut(s) 379
BstHHI GCGC 1 cut(s) 1097
BstKTI GATC 6 cut(s) 64, 168, 232, 1255, 1269, 1498
BstMAI GTCTC 2 cut(s) 696, 1414
BstMBI GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
BstMWI GCNNNNNNNGC 7 cut(s) 78, 183, 857, 866, 953, 962, 1094
BstNI CCWGG 2 cut(s) 447, 1544
BstNSI RCATGY 4 cut(s) 420, 432, 496, 1391
BstSCI CCNGG 2 cut(s) 445, 1542
BstSFI CTRYAG 1 cut(s) 931
BstSLI GKGCMC 2 cut(s) 134, 1459
BstUI CGCG 1 cut(s) 379
BstV1I GCAGC 3 cut(s) 11, 37, 881
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 2 cut(s) 1252, 1495
BstXI CCANNNNNNTGG 1 cut(s) 599
BstYI RGATCY 2 cut(s) 1252, 1495
BstZ17I GTATAC 1 cut(s) 1303
BsuI GTATCC 2 cut(s) 524, 1343
BsuRI GGCC 4 cut(s) 5, 633, 756, 1068
BtgI CCRYGG 1 cut(s) 14
BtrI CACGTC 1 cut(s) 368
BtsCI GGATG 3 cut(s) 222, 588, 609
BtsI GCAGTG 2 cut(s) 774, 834
BtsIMutI CAGTG 4 cut(s) 774, 834, 940, 1353
BveI ACCTGC 1 cut(s) 1013
Cac8I GCNNGC 5 cut(s) 184, 967, 1124, 1128, 1389
CfoI GCGC 1 cut(s) 1097
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 2 cut(s) 374, 1204
CseI GACGC 3 cut(s) 188, 368, 1154
CsiI ACCWGGT 1 cut(s) 1542
Csp6I GTAC 4 cut(s) 106, 487, 708, 1039
CspCI CAANNNNNGTGG 2 cut(s) 633, 668
CviAII CATG 9 cut(s) 417, 429, 493, 635, 875, 1072, 1264, 1334, 1388
CviQI GTAC 4 cut(s) 106, 487, 708, 1039
DpnI GATC 6 cut(s) 63, 167, 231, 1254, 1268, 1497
DpnII GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
DraIII CACNNNGTG 1 cut(s) 629
EaeI YGGCCR 3 cut(s) 3, 631, 1066
EciI GGCGGA 2 cut(s) 136, 543
Eco130I CCWWGG 2 cut(s) 126, 613
Eco24I GRGCYC 1 cut(s) 162
Eco47I GGWCC 2 cut(s) 374, 1204
Eco57I CTGAAG 2 cut(s) 61, 1110
EcoRI GAATTC 2 cut(s) 510, 777
EcoRII CCWGG 2 cut(s) 445, 1542
EcoT14I CCWWGG 2 cut(s) 126, 613
EcoT22I ATGCAT 1 cut(s) 1291
EcoT38I GRGCYC 1 cut(s) 162
ErhI CCWWGG 2 cut(s) 126, 613
Esp3I CGTCTC 1 cut(s) 696
FaeI CATG 9 cut(s) 420, 432, 496, 638, 878, 1075, 1267, 1337, 1391
FalI AAGNNNNNCTT 6 cut(s) 1095, 1127, 1193, 1225, 1375, 1407
FaqI GGGAC 2 cut(s) 188, 631
FatI CATG 9 cut(s) 416, 428, 492, 634, 874, 1071, 1263, 1333, 1387
FauI CCCGC 1 cut(s) 77
FblI GTMKAC 1 cut(s) 1302
Fnu4HI GCNGC 4 cut(s) 25, 51, 73, 870
FokI GGATG 3 cut(s) 209, 575, 596
FriOI GRGCYC 1 cut(s) 162
Fsp4HI GCNGC 4 cut(s) 25, 51, 73, 870
GlaI GCGC 1 cut(s) 1096
GluI GCNGC 4 cut(s) 25, 51, 73, 870
HaeIII GGCC 4 cut(s) 5, 633, 756, 1068
HapII CCGG 2 cut(s) 174, 806
HgaI GACGC 3 cut(s) 188, 368, 1154
HhaI GCGC 1 cut(s) 1097
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 9 cut(s) 420, 432, 496, 638, 878, 1075, 1267, 1337, 1391
Hin6I GCGC 1 cut(s) 1095
HinP1I GCGC 1 cut(s) 1095
HindIII AAGCTT 1 cut(s) 1160
HinfI GANTC 4 cut(s) 991, 998, 1135, 1172
HpaII CCGG 2 cut(s) 174, 806
HphI GGTGA 4 cut(s) 56, 163, 1354, 1423
Hpy166II GTNNAC 5 cut(s) 505, 655, 688, 710, 1303
Hpy188I TCNGA 5 cut(s) 157, 217, 384, 1294, 1500
Hpy8I GTNNAC 5 cut(s) 505, 655, 688, 710, 1303
Hpy99I CGWCG 3 cut(s) 182, 369, 1370
HpyAV CCTTC 6 cut(s) 276, 379, 1010, 1085, 1377, 1495
HpyCH4III ACNGT 5 cut(s) 18, 460, 707, 935, 1366
HpyCH4IV ACGT 4 cut(s) 189, 201, 367, 598
HpyCH4V TGCA 7 cut(s) 416, 744, 767, 869, 1289, 1308, 1340
HpyF10VI GCNNNNNNNGC 7 cut(s) 78, 183, 857, 866, 953, 962, 1094
HpySE526I ACGT 4 cut(s) 189, 201, 367, 598
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 9 cut(s) 420, 432, 496, 638, 878, 1075, 1267, 1337, 1391
HspAI GCGC 1 cut(s) 1095
Kzo9I GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
LmnI GCTCC 2 cut(s) 719, 1019
Lsp1109I GCAGC 3 cut(s) 11, 37, 881
LweI GCATC 1 cut(s) 1298
MabI ACCWGGT 1 cut(s) 1542
MaeII ACGT 4 cut(s) 189, 201, 367, 598
MaeIII GTNAC 2 cut(s) 424, 1411
MalI GATC 6 cut(s) 63, 167, 231, 1254, 1268, 1497
MboI GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
MboII GAAGA 4 cut(s) 209, 1157, 1207, 1538
MflI RGATCY 2 cut(s) 1252, 1495
MhlI GDGCHC 3 cut(s) 134, 162, 1459
MlsI TGGCCA 2 cut(s) 5, 633
MluCI AATT 8 cut(s) 91, 141, 462, 510, 558, 675, 777, 1627
MluNI TGGCCA 2 cut(s) 5, 633
MlyI GAGTC 1 cut(s) 1007
Mox20I TGGCCA 2 cut(s) 5, 633
Mph1103I ATGCAT 1 cut(s) 1291
MscI TGGCCA 2 cut(s) 5, 633
MslI CAYNNNNRTG 1 cut(s) 597
Msp20I TGGCCA 2 cut(s) 5, 633
MspA1I CMGCKG 1 cut(s) 24
MspI CCGG 2 cut(s) 174, 806
MspR9I CCNGG 2 cut(s) 447, 1544
Mva1269I GAATGC 2 cut(s) 660, 746
MvaI CCWGG 2 cut(s) 447, 1544
MvnI CGCG 1 cut(s) 379
MwoI GCNNNNNNNGC 7 cut(s) 78, 183, 857, 866, 953, 962, 1094
NdeII GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
NlaIII CATG 9 cut(s) 420, 432, 496, 638, 878, 1075, 1267, 1337, 1391
NlaIV GGNNCC 3 cut(s) 20, 607, 1497
NmeAIII GCCGAG 1 cut(s) 995
NmuCI GTSAC 2 cut(s) 424, 1411
NsiI ATGCAT 1 cut(s) 1291
NspI RCATGY 4 cut(s) 420, 432, 496, 1391
PaeI GCATGC 1 cut(s) 1391
PaqCI CACCTGC 1 cut(s) 1013
PciI ACATGT 2 cut(s) 428, 492
PcsI WCGNNNNNNNCGW 2 cut(s) 186, 300
PctI GAATGC 2 cut(s) 660, 746
PfeI GAWTC 3 cut(s) 991, 1135, 1172
PflFI GACNNNGTC 1 cut(s) 378
PkrI GCNGC 4 cut(s) 26, 52, 74, 871
PleI GAGTC 1 cut(s) 1006
PpsI GAGTC 1 cut(s) 1006
PscI ACATGT 2 cut(s) 428, 492
PshBI ATTAAT 2 cut(s) 678, 864
Psp6I CCWGG 2 cut(s) 445, 1542
PspGI CCWGG 2 cut(s) 445, 1542
PspN4I GGNNCC 3 cut(s) 20, 607, 1497
PspPI GGNCC 2 cut(s) 374, 1204
PsuI RGATCY 2 cut(s) 1252, 1495
PsyI GACNNNGTC 1 cut(s) 378
RsaI GTAC 4 cut(s) 107, 488, 709, 1040
RsaNI GTAC 4 cut(s) 106, 487, 708, 1039
RseI CAYNNNNRTG 1 cut(s) 597
SatI GCNGC 4 cut(s) 25, 51, 73, 870
Sau3AI GATC 6 cut(s) 61, 165, 229, 1252, 1266, 1495
Sau96I GGNCC 2 cut(s) 374, 1204
ScaI AGTACT 1 cut(s) 107
SchI GAGTC 1 cut(s) 1007
ScrFI CCNGG 2 cut(s) 447, 1544
SduI GDGCHC 3 cut(s) 134, 162, 1459
SexAI ACCWGGT 1 cut(s) 1542
SfaNI GCATC 1 cut(s) 1298
SfcI CTRYAG 1 cut(s) 931
SgrAI CRCCGGYG 1 cut(s) 173
SinI GGWCC 2 cut(s) 374, 1204
SmiMI CAYNNNNRTG 1 cut(s) 597
SphI GCATGC 1 cut(s) 1391
Sse9I AATT 8 cut(s) 91, 141, 462, 510, 558, 675, 777, 1627
SsiI CCGC 6 cut(s) 22, 70, 73, 147, 377, 528
SspI AATATT 1 cut(s) 732
StyD4I CCNGG 2 cut(s) 445, 1542
StyI CCWWGG 2 cut(s) 126, 613
TaaI ACNGT 5 cut(s) 18, 460, 707, 935, 1366
TaiI ACGT 4 cut(s) 192, 204, 370, 601
TaqI TCGA 4 cut(s) 30, 195, 303, 364
TasI AATT 8 cut(s) 91, 141, 462, 510, 558, 675, 777, 1627
TatI WGTACW 3 cut(s) 105, 486, 1038
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 3 cut(s) 991, 1135, 1172
TscAI CASTG 4 cut(s) 774, 841, 940, 1360
TseFI GTSAC 2 cut(s) 424, 1411
TseI GCWGC 3 cut(s) 24, 50, 869
Tsp45I GTSAC 2 cut(s) 424, 1411
TspDTI ATGAA 2 cut(s) 1148, 1322
TspGWI ACGGA 2 cut(s) 1259, 1430
TspRI CASTG 4 cut(s) 774, 841, 940, 1360
Tth111I GACNNNGTC 1 cut(s) 378
VpaK11BI GGWCC 2 cut(s) 374, 1204
VspI ATTAAT 2 cut(s) 678, 864
XapI RAATTY 3 cut(s) 141, 510, 777
XceI RCATGY 4 cut(s) 420, 432, 496, 1391
XcmI CCANNNNNNNNNTGG 5 cut(s) 133, 512, 599, 973, 1547
XmiI GTMKAC 1 cut(s) 1302
ZraI GACGTC 1 cut(s) 202
ZrmI AGTACT 1 cut(s) 107
Zsp2I ATGCAT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.