Rh6DG478600

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000762
Physical Location & Seq
Forward (+)
64352508 .. 64354048
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG478600.1

Sequence Viewer

Length: 324 bp
ATGTTGATGTTGCATGATGAAGACTTGAAAGGATTACTAATTCAAAGAACACAGCTTCATCTGGGATTGCTCGAGATAGAGAGAGATCGGAGGCAAGTTCTCACCTCATCATCTGAGATCCGAGGGTGGATACAGAGGGTTTTTGCCAGAAGTACAATTCCCTTAACACCAAAGATTGTGAATGACATCCATAAACGTGGTGACACCAACCTTGGGACATCACGAGGTAGCCATGATACCTCAAAGATTGCGGACAGCATTCAGAACAGAGGAATTAATCAGGATTTCAATGGCTACATTTGTTTTCCCATACTCTTGATATAG

Protein Analysis

107

Amino Acids

12.22

Weight (kDa)

9.03

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 251
AclWI GGATC 1 cut(s) 112
AfaI GTAC 1 cut(s) 154
AfiI CCNNNNNNNGG 1 cut(s) 213
AgsI TTSAA 3 cut(s) 28, 44, 289
AluBI AGCT 1 cut(s) 55
AluI AGCT 1 cut(s) 55
AlwI GGATC 1 cut(s) 112
Ama87I CYCGRG 1 cut(s) 71
AseI ATTAAT 1 cut(s) 276
AsuHPI GGTGA 2 cut(s) 94, 212
AvaI CYCGRG 1 cut(s) 71
BauI CACGAG 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 27
BciVI GTATCC 1 cut(s) 123
BfuI GTATCC 1 cut(s) 123
BmeT110I CYCGRG 1 cut(s) 71
BpiI GAAGAC 1 cut(s) 27
BsaJI CCNNGG 2 cut(s) 121, 211
Bsc4I CCNNNNNNNGG 1 cut(s) 213
BseDI CCNNGG 2 cut(s) 121, 211
BseGI GGATG 1 cut(s) 186
BseLI CCNNNNNNNGG 1 cut(s) 213
BseMII CTCAG 1 cut(s) 105
BsiHKCI CYCGRG 1 cut(s) 71
BslFI GGGAC 1 cut(s) 229
BslI CCNNNNNNNGG 1 cut(s) 213
BsmFI GGGAC 1 cut(s) 229
BsmI GAATGC 1 cut(s) 258
BsoBI CYCGRG 1 cut(s) 71
Bsp143I GATC 2 cut(s) 85, 117
BspACI CCGC 1 cut(s) 251
BspCNI CTCAG 1 cut(s) 106
BspPI GGATC 1 cut(s) 112
BssECI CCNNGG 2 cut(s) 121, 211
BssMI GATC 2 cut(s) 85, 117
BssSI CACGAG 1 cut(s) 222
BssT1I CCWWGG 1 cut(s) 211
Bst2BI CACGAG 1 cut(s) 222
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 186
BstKTI GATC 2 cut(s) 88, 120
BstMBI GATC 2 cut(s) 85, 117
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 117
BstXI CCANNNNNNTGG 1 cut(s) 197
BstYI RGATCY 1 cut(s) 117
BsuI GTATCC 1 cut(s) 123
BtsCI GGATG 1 cut(s) 186
Csp6I GTAC 1 cut(s) 153
CviAII CATG 2 cut(s) 14, 233
CviJI RGCY 3 cut(s) 55, 231, 294
CviKI_1 RGCY 3 cut(s) 55, 231, 294
CviQI GTAC 1 cut(s) 153
DdeI CTNAG 1 cut(s) 114
DpnI GATC 2 cut(s) 87, 119
DpnII GATC 2 cut(s) 85, 117
Eco130I CCWWGG 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 71
EcoT14I CCWWGG 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 2 cut(s) 17, 236
FaiI YATR 5 cut(s) 15, 192, 234, 311, 322
FaqI GGGAC 1 cut(s) 229
FatI CATG 2 cut(s) 13, 232
FokI GGATG 1 cut(s) 173
Hin1II CATG 2 cut(s) 17, 236
HphI GGTGA 2 cut(s) 94, 212
Hpy188I TCNGA 4 cut(s) 90, 115, 122, 264
Hpy188III TCNNGA 4 cut(s) 73, 222, 281, 316
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 1 cut(s) 13
HpyF3I CTNAG 1 cut(s) 114
HpySE526I ACGT 1 cut(s) 196
Hsp92II CATG 2 cut(s) 17, 236
Kzo9I GATC 2 cut(s) 85, 117
LpnPI CCDG 3 cut(s) 47, 160, 266
MaeII ACGT 1 cut(s) 196
MaeIII GTNAC 1 cut(s) 200
MalI GATC 2 cut(s) 87, 119
MboI GATC 2 cut(s) 85, 117
MboII GAAGA 1 cut(s) 32
MflI RGATCY 1 cut(s) 117
MluCI AATT 3 cut(s) 39, 156, 273
MnlI CCTC 7 cut(s) 84, 115, 116, 129, 218, 250, 263
MseI TTAA 2 cut(s) 164, 276
MslI CAYNNNNRTG 1 cut(s) 195
Mva1269I GAATGC 1 cut(s) 258
NdeII GATC 2 cut(s) 85, 117
NlaIII CATG 2 cut(s) 17, 236
NmuCI GTSAC 1 cut(s) 200
PaeR7I CTCGAG 1 cut(s) 71
PctI GAATGC 1 cut(s) 258
PshBI ATTAAT 1 cut(s) 276
PsuI RGATCY 1 cut(s) 117
RsaI GTAC 1 cut(s) 154
RsaNI GTAC 1 cut(s) 153
RseI CAYNNNNRTG 1 cut(s) 195
SaqAI TTAA 2 cut(s) 164, 276
Sau3AI GATC 2 cut(s) 85, 117
SetI ASST 6 cut(s) 57, 107, 199, 213, 229, 242
Sfr274I CTCGAG 1 cut(s) 71
SlaI CTCGAG 1 cut(s) 71
SmiMI CAYNNNNRTG 1 cut(s) 195
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
Sse9I AATT 3 cut(s) 39, 156, 273
SsiI CCGC 1 cut(s) 251
StyI CCWWGG 1 cut(s) 211
TaiI ACGT 1 cut(s) 199
TaqI TCGA 1 cut(s) 72
TasI AATT 3 cut(s) 39, 156, 273
TatI WGTACW 1 cut(s) 152
Tru1I TTAA 2 cut(s) 164, 276
Tru9I TTAA 2 cut(s) 164, 276
TseFI GTSAC 1 cut(s) 200
Tsp45I GTSAC 1 cut(s) 200
TspDTI ATGAA 2 cut(s) 33, 47
VspI ATTAAT 1 cut(s) 276
XhoI CTCGAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.