Rroxscaffold_4G00313720

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
37459592 .. 37460381
790 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_4G00313720.1

Sequence Viewer

Length: 279 bp
ATGGCTCATCAACATCAATTTGATCCAATCCAATCCACGCTGATGTTGATGAGGAGATCACCGGTCTTCGACCCCAAGTCGAGAAGATTGAGAAACAGACCACATCGAAGGTTTTGCATTGGAGGATACAGAGGGTTATATGCCAAAAGTACAATTCCCTTAACACCAAAGATTGTGAATGACATCCATAAACGTGGTGGCACCAACCTTGGGACATCACGAGGTAGCCATAATAACTCAAAAATTGCAGACAACATTCAAGACAGAGGATTTAATTAG

Protein Analysis

92

Amino Acids

10.55

Weight (kDa)

11.56

Isoelectric Point (pI)

63.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 41 - 91 1.2e-06 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 200
AclWI GGATC 1 cut(s) 17
AfaI GTAC 1 cut(s) 151
AfiI CCNNNNNNNGG 1 cut(s) 210
AgeI ACCGGT 1 cut(s) 61
AgsI TTSAA 1 cut(s) 260
AhdI GACNNNNNGTC 1 cut(s) 76
AlwI GGATC 1 cut(s) 17
AsiGI ACCGGT 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 51
BanI GGYRCC 1 cut(s) 200
BauI CACGAG 1 cut(s) 219
BbsI GAAGAC 1 cut(s) 58
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciVI GTATCC 1 cut(s) 119
BfuI GTATCC 1 cut(s) 119
BmeRI GACNNNNNGTC 1 cut(s) 76
BmiI GGNNCC 1 cut(s) 202
BpiI GAAGAC 1 cut(s) 58
BsaJI CCNNGG 1 cut(s) 208
BsaWI WCCGGW 1 cut(s) 61
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse118I RCCGGY 1 cut(s) 61
BseDI CCNNGG 1 cut(s) 208
BseGI GGATG 1 cut(s) 183
BseLI CCNNNNNNNGG 1 cut(s) 210
BseRI GAGGAG 1 cut(s) 67
BshNI GGYRCC 1 cut(s) 200
BshTI ACCGGT 1 cut(s) 61
BsiSI CCGG 1 cut(s) 62
BslFI GGGAC 1 cut(s) 226
BslI CCNNNNNNNGG 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 226
Bsp143I GATC 2 cut(s) 22, 56
BspLI GGNNCC 1 cut(s) 202
BspPI GGATC 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 200
BsrFI RCCGGY 1 cut(s) 61
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 1 cut(s) 208
BssMI GATC 2 cut(s) 22, 56
BssSI CACGAG 1 cut(s) 219
BssT1I CCWWGG 1 cut(s) 208
Bst2BI CACGAG 1 cut(s) 219
BstF5I GGATG 1 cut(s) 183
BstKTI GATC 2 cut(s) 25, 59
BstMBI GATC 2 cut(s) 22, 56
BstV2I GAAGAC 1 cut(s) 58
BstXI CCANNNNNNTGG 1 cut(s) 194
BsuI GTATCC 1 cut(s) 119
BtsCI GGATG 1 cut(s) 183
Cfr10I RCCGGY 1 cut(s) 61
Csp6I GTAC 1 cut(s) 150
CspAI ACCGGT 1 cut(s) 61
CviJI RGCY 2 cut(s) 5, 228
CviKI_1 RGCY 2 cut(s) 5, 228
CviQI GTAC 1 cut(s) 150
DpnI GATC 2 cut(s) 24, 58
DpnII GATC 2 cut(s) 22, 56
DriI GACNNNNNGTC 1 cut(s) 76
Eam1105I GACNNNNNGTC 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 208
ErhI CCWWGG 1 cut(s) 208
FaiI YATR 4 cut(s) 139, 141, 189, 231
FaqI GGGAC 1 cut(s) 226
FokI GGATG 1 cut(s) 170
HapII CCGG 1 cut(s) 62
HpaII CCGG 1 cut(s) 62
HphI GGTGA 1 cut(s) 51
Hpy188III TCNNGA 3 cut(s) 81, 219, 260
HpyAV CCTTC 1 cut(s) 102
HpyCH4IV ACGT 1 cut(s) 193
HpyCH4V TGCA 2 cut(s) 117, 248
HpySE526I ACGT 1 cut(s) 193
Kzo9I GATC 2 cut(s) 22, 56
LpnPI CCDG 1 cut(s) 75
MaeII ACGT 1 cut(s) 193
MalI GATC 2 cut(s) 24, 58
MboI GATC 2 cut(s) 22, 56
MboII GAAGA 2 cut(s) 58, 96
MluCI AATT 4 cut(s) 17, 153, 243, 274
MnlI CCTC 5 cut(s) 45, 116, 125, 215, 260
MseI TTAA 2 cut(s) 161, 273
MslI CAYNNNNRTG 2 cut(s) 41, 192
MspI CCGG 1 cut(s) 62
NdeII GATC 2 cut(s) 22, 56
NlaIV GGNNCC 1 cut(s) 202
PinAI ACCGGT 1 cut(s) 61
PspN4I GGNNCC 1 cut(s) 202
RsaI GTAC 1 cut(s) 151
RsaNI GTAC 1 cut(s) 150
RseI CAYNNNNRTG 2 cut(s) 41, 192
SaqAI TTAA 2 cut(s) 161, 273
Sau3AI GATC 2 cut(s) 22, 56
SetI ASST 4 cut(s) 113, 196, 210, 226
SgeI CNNG 9 cut(s) 49, 74, 88, 93, 206, 221, 231, 233, 272
SmiMI CAYNNNNRTG 2 cut(s) 41, 192
Sse9I AATT 4 cut(s) 17, 153, 243, 274
StyI CCWWGG 1 cut(s) 208
TaiI ACGT 1 cut(s) 196
TaqI TCGA 3 cut(s) 69, 80, 106
TasI AATT 4 cut(s) 17, 153, 243, 274
TatI WGTACW 1 cut(s) 149
Tru1I TTAA 2 cut(s) 161, 273
Tru9I TTAA 2 cut(s) 161, 273
XcmI CCANNNNNNNNNTGG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.